Q8HWS3  RFX6_HUMAN

Gene name: RFX6   Description: DNA-binding protein RFX6

Length: 928    GTS: 1.325e-06   GTS percentile: 0.367     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 5      BenignSAV: 15      gnomAD_SAV: 426      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MAKVPELEDTFLQAQPAPQLSPGIQEDCCVQLLGKGLLVYPEETVYLAAEGQPGGEQGGGEKGEDPELPGAVKSEMHLNNGNFSSEEEDADNHDSKTKAA 100
BenignSAV:          K          E                              V                          Q              T          
gnomAD_SAV:      #FRK   NI  SE E   FLE R  S  PH  E W  H#D  LD T   P A A D E     LQ LR L LKIP  DR    G   TEKQ# ES PE
Conservation:  6100333333333333300133301111111001000010001010000101000000010000010010111142121331254354111111211111
SS_PSIPRED:                             HHH HHH     EE                                              HHHHHH HHHHHHHH
SS_SPIDER3:                                 HH      EE      HE                                       H       HHHHHH
SS_PSSPRED:                               HHHHH                                                                    
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   D DDDDDDDDDDDDDDDDDDDDDDDD                     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            DQYLSQKKTITQIVKDKKKQTQLTLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLGTRGHSKYHYYGIGIKES 200
PathogenicSAV:                                                                                 #                   
BenignSAV:         A                                                                                               
gnomAD_SAV:      H A   S KR#      P KV  R   G  #        #   H         D      V I    VHEQ       W     R       T   # 
Conservation:  3101124444222122333324364269779959979999999977697777766447797999999976777677977997777769799999799767
SS_PSIPRED:    HHHHHH HHHHHHHHHHHHHHHHHHHHHHHHEEE   EEE HHHHHHHHHHHHHH       HH HHHHHHHH                 HH        
SS_SPIDER3:    HHH        HH H HHHHHHHHHHHHHHHEEE   EE EHHHHHHHHHHHHHH         H    EEEE     E            E        
SS_PSSPRED:    HHH             HHHHHHHHHHHHHHHHH     E  HHHHHHHHHHHHHHH     HHHHHHHHHHHH                           
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDD                                                                    DDDD DDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDD                                                                                  
DO_IUPRED2A:   DD                                                                                                  
DNA_BIND:                             TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLGTRGHSKYHYYGIGIKE 

                       10        20        30        40        50        60        70        80        90     
AA:            SAYYHSVYSGKGLTRFSGSKLKNEGGFTRKYSLSSKTGTLLPEFPSAQHLVYQGCISKDKVDTLIMMYKTHCQCILDNAINGNFEEIQHFLLHFWQGMPD 300
PathogenicSAV:                 P                                                                                   
gnomAD_SAV:     VCDR ID  N W    E E N     AS  L        IT  LNT QP   V   NG A  V     S          KEI  K    S    KE   
Conservation:  7699667779997769976667679979999997799979997976677755433565797677767779799979999974796975677677979775
SS_PSIPRED:                                 HH                HHH        HHHHHHHHHHHHHHHHHHHHHHH    HHHHHHHHHHH   H
SS_SPIDER3:        EE       EE                                 H          HHHHHHHHHHHHHHHHHHHHH     HHHHHHHHHH     
SS_PSSPRED:                                                   HHH         HHHHHHHHHHHHHHHHHHHHHH   HHHHHHHHHHH    H
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                     
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            HLLPLLENPVIIDIFCVCDSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQWVVSSLENLPEALTDKKIPIVRRFVSSLKRQTSFLHLAQIARPAL 400
PathogenicSAV:                                                                                     Q               
BenignSAV:                                 I                                                                       
gnomAD_SAV:         IK   V    R    V C   R I        IS    T V YV#E L*H   L        V N    VL*       QEI   Y V MS  G 
Conservation:  7977696335557579996647677665796767865564579579756993774743666579941924895665749896989999998979999999
SS_PSIPRED:    HHHHHH  HHHHHHHHHHHHHHHHHHHHHHHHHH     HHHHHHHHHHHHHHHHHHHHHH    HHHHH  HHHHHHHHHHHHHHHHHHHHHHHHHHHH
SS_SPIDER3:            HHHHHHHHHHHHHHHHHHHHHHHHHHH    HHHHHHHHHHHHHHHHHHHHHH    HHHHH   HHHHHHHHHHHHHHHHHHHHHHHHHHH
SS_PSSPRED:    HHHH    HHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            FDQHVVNSMVSDIERVDLNSIGSQALLTISGSTDTESGIYTEHDSITVFQELKDLLKKNATVEAFIEWLDTVVEQRVIKTSKQNGRSLKKRAQDFLLKWS 500
BenignSAV:                                               Y                                                         
gnomAD_SAV:       QALH V#F    A           NML  S #DA   P Y   AA     #      I           L K I  A E  R  F  S *     #C
Conservation:  9992795586287636883584584663243315151628483675459657667766779677777777464766769457627754767776977579
SS_PSIPRED:      HHHHHHHHHHHHH  HHHHH  EEEEE            HHHHHHHHHHHHHHHH    HHHHHHHHHHHHHHHHHHHHH       HHHHHHHHHHH
SS_SPIDER3:      HHHHHHHHHHHH   HHHHH    EEE                 HHHHHHHHHH     HHHHHHHHHHHHHHHHH         HHHHHHHHHHHHH
SS_PSSPRED:       HHHHHHHHHHHH   HHHHH                    HHHHHHHHHHHHH     HHHHHHHHHHHHHHHHHHHH      HHHHHHHHHHHHH
DO_DISOPRED3:                                    D                                                                 
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                      D                

                       10        20        30        40        50        60        70        80        90     
AA:            FFGARVMHNLTLNNASSFGSFHLIRMLLDEYILLAMETQFNNDKEQELQNLLDKYMKNSDASKAAFTASPSSCFLANRNKGSMVSSDAVKNESHVETTYL 600
PathogenicSAV:      G                                                                                              
gnomAD_SAV:     C V*      W # Y        *   N   F  V SH    EQ       E  #T P V E V I  L     D HT   V FRNT  Y  QM K#C#
Conservation:  9677967967997773765977677777999799759999796796597679676746467887774879999999775833234383786832233352
SS_PSIPRED:    HHHHHHHHHHH       HHHHHHHHHHHHHHHHHHHHHHH  HHHHHHHHHHHHHH  HHHHHHH     HHH                          
SS_SPIDER3:    HHHHHHHHHHHH     HHHHHHHHHHHHHHHHHHHHH H    HHHHHHHHHHH                                             
SS_PSSPRED:    HHHHHHHHHHHH       HHHHHHHHHHHHHHHHHHHHHH   HHHHHHHHHHHH                                            
DO_DISOPRED3:                                                 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                               DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                     DDD                               DDDDD     DDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            PLPSSQPGGLGPALHQFPAGNTDNMPLTGQMELSQIAGHLMTPPISPAMASRGSVINQGPMAGRPPSVGPVLSAPSHCSTYPEPIYPTLPQANHDFYSTS 700
BenignSAV:                                                S       Q                                   A            
gnomAD_SAV:    T       RP       #    EIIL A    I  S#    ISAV   TEG#     KVRV#  # T  LEV #S P  ## Q V S FS #S    RA 
Conservation:  2542342422122312412322224225443533533346599849963369699999876536342322243332354465722653553334436324
SS_PSIPRED:                                                  HHH                                                   
SS_SPIDER3:                                                   HH                                                   
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD      D D  D  D  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDD   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDD       DDD      D        

                       10        20        30        40        50        60        70        80        90     
AA:            SNYQTVFRAQPHSTSGLYPHHTEHGRCMAWTEQQLSRDFFSGSCAGSPYNSRPPSSYGPSLQAQDSHNMQFLNTGSFNFLSNTGAASCQGATLPPNSPNG 800
BenignSAV:                              G                N                                              E         A
gnomAD_SAV:        SM  E RQ I      LSKY#*# G    H      C RFVR  H FW L    RY     L HIK         #         E AV   L  A
Conservation:  4386424746453332332232423542333654437629333654337335334262242222324345454433657333233436342244425347
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                  H       H                             
SS_PSSPRED:                                   HHH                                                                  
DO_DISOPRED3:  DDDDDDDDDDDDDDDD   DDDD D      DDD       DDDDDDDDDDDDDDDDDDDDDDDDDDDDD                              
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDD      DDDDD             
DO_IUPRED2A:           DDDDDDDDDDDD   D   DD                D   DDDDDDDDDDDDDDDDD D                   DDDDDD D   DD

                       10        20        30        40        50        60        70        80        90     
AA:            YYGSNINYPESHRLGSMVNQHVSVISSIRSLPPYSDIHDPLNILDDSGRKQTSSFYTDTSSPVACRTPVLASSLQTPIPSSSSQCMYGTSNQYPAQETLD 900
gnomAD_SAV:    #C RH   S  PT R R  H I      P  L# N   N   VF   D  H  L H GI P A #QS #PT G *  V  F  P T      N       
Conservation:  5774434624358435556899999987853347475997958946337922347734324432444433442323344344649985252353366342
SS_PSIPRED:              HH  HHHHHHH    EE              HH                                                         
SS_SPIDER3:     E              HH   EEEEEEE             H                                                          
SS_PSSPRED:                    HHHHHHHHHH                                                                          
DO_DISOPRED3:                                                   D DD   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                   D  DD  D            D DDDDDDDDD DDDDDDDDDD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDD     DD                       DDDDDDDDD DDDDDDDDDDDD       D      D D    DD DDDDDDDDDDDDDDDDD

                       10        20        
AA:            SHGTSSREMVSSLPPINTVFMGTAAGGT 928
gnomAD_SAV:    F #  R D            V RV  SA
Conservation:  3232232535559988578888443723
SS_PSIPRED:         HHHHHH      EEE        
SS_SPIDER3:          H         EEEE       E
SS_PSSPRED:                     EEE        
DO_DISOPRED3:  DDDDDDDDDDDD     D      DDDD
DO_SPOTD:      DDDDDDDD               DDDDD
DO_IUPRED2A:   DDDDDDDDDDDDD          D