Q8IXK2  GLT12_HUMAN

Gene name: GALNT12   Description: Polypeptide N-acetylgalactosaminyltransferase 12

Length: 581    GTS: 3.334e-06   GTS percentile: 0.940     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 8      BenignSAV: 11      gnomAD_SAV: 278      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MWGRTARRRCPRELRRGREALLVLLALLALAGLGSVLRAQRGAGAGAAEPGPPRTPRPGRREPVMPRPPVPANALGARGEAVRLQLQGEELRLQEESVRL 100
BenignSAV:       E                                          R                  L                                   
gnomAD_SAV:     L                     P                     R                                               RQKRL Q
Conservation:  2222222222222222000010200111111112011101222222210100000001020021102211101113212223121211121001111412
STMI:                             MMMMMMMMMMMMMMMMMM                                                               
SS_PSIPRED:               HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                                        EE    HHHHHHHHHHHHH
SS_SPIDER3:     E         HHHHH HHHHHHHHHHHHHHHHHHHHHHHH                                       EEE    HHHHHHHHHHHHH
SS_PSSPRED:               HHHHHHHHHHHHHHHHHHHHHHHHHHHHH                                        EEE    HHHHHHHHHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                          
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                    
DO_IUPRED2A:    DD   DDDD                              DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                           

                       10        20        30        40        50        60        70        80        90     
AA:            HQINIYLSDRISLHRRLPERWNPLCKEKKYDYDNLPRTSVIIAFYNEAWSTLLRTVYSVLETSPDILLEEVILVDDYSDREHLKERLANELSGLPKVRLI 200
BenignSAV:                       VP                                                                                
gnomAD_SAV:    Q    C  YH     P  GP  Q R Q  FG   S  I    T    GS A  Q  CR    FLV  P   F A E  #  R   H  S  L RLR CPS
Conservation:  2343323331233332131421329212262311493885766689985666688656686445426636666799465516982294165515278896
SS_PSIPRED:    HHHHHHHH              HHHH     HHH    EEEEEE   HHHHHHHHHHHHHH   HHH  EEEEE      HHHHHHHHHHHH    EEEE
SS_SPIDER3:      HHHHHHH             HHHH           EEEEEEE   HHHHHHHHHHHHHHH  HHHH  EEEE      HHHHHHHHHHHH    EEEE
SS_PSSPRED:    HHHHHHHHH             HHHHH           EEEEEE   HHHHHHHHHHHHHH  HHHHHHHHHEE      HHHHHHHHHHHH    EEEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:                                                                                  D                        
DISULFID:                              C                                                                           

                       10        20        30        40        50        60        70        80        90     
AA:            RANKREGLVRARLLGASAARGDVLTFLDCHCECHEGWLEPLLQRIHEEESAVVCPVIDVIDWNTFEYLGNSGEPQIGGFDWRLVFTWHTVPERERIRMQS 300
PathogenicSAV:                                                                                                 W   
BenignSAV:                                                                 N          R                            
gnomAD_SAV:    H#KEGD   PTP   # VET  F S V  DR  QG * QL         *  ARL # A GR   K V   R S# SSLY*KVL M   FS  KK Q#HF
Conservation:  8726999898886699626383899899999973179498662771134347789888695965957676336956999896769596269206613524
SS_PSIPRED:    E      HHHHHHH HHH    EEEEE           HHHHHHHHH   EEEEEE  EEE    EE       EE EEE   EEEEEE  HHHHHH   
SS_SPIDER3:    E      HHHHHHHHHHH    EEEEEEE  E     HHHHHHHHHH   EEE  EEEEEE    EEE      EEEEEE E EEEEE   HHHHHH   
SS_PSSPRED:    E    HHHHHHHHHHHHHH   EEEEEE        HHHHHHHHHHH    E    EEEE                     EEEEEEEE  HHHHHH   
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:           R                                                                                               
METAL:                                    D H                                                                      

                       10        20        30        40        50        60        70        80        90     
AA:            PVDVIRSPTMAGGLFAVSKKYFEYLGSYDTGMEVWGGENLEFSFRIWQCGGVLETHPCSHVGHVFPKQAPYSRNKALANSVRAAEVWMDEFKELYYHRNP 400
PathogenicSAV:   N                                     D                               H        H             C    
BenignSAV:      I                                                                                                  
gnomAD_SAV:    #IN   PTA           C D*  CC A V  * A K KLF S  R#R     YAY R  #   R  S  CK #   G C  G   G   Q  DYP S
Conservation:  3486649989989996847379269969959969999998979896989892996599999997895479969247549559675987626823775865
SS_PSIPRED:                 EEEEEHHHHHHH           HHHHHHEEEEEE   EEEEEE   EEE            HHHHHHHHHHHH HHHHHHHHHH H
SS_SPIDER3:             E   EEEEEHHHHHH                EEEEEEEEE  EEEEEE   EE E          H HHHHHHHHHH   HHHHHHHHH H
SS_PSSPRED:       EE       EEEEE HHHHHHH             EEEEEHHHHH   EEEEE                HHHHHHHHHHHHHHHHHHHHHHHHHH  
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:                                         W                                   Y                             
METAL:                                                                       H                                     
DISULFID:                                                      C        C                                          

                       10        20        30        40        50        60        70        80        90     
AA:            RARLEPFGDVTERKQLRDKLQCKDFKWFLETVYPELHVPEDRPGFFGMLQNKGLTDYCFDYNPPDENQIVGHQVILYLCHGMGQNQFFEYTSQKEIRYNT 500
PathogenicSAV:                                                                               F           M         
BenignSAV:                                                                     N                                   
gnomAD_SAV:    H C KT      G   LH  RF E R       T  R  GY S  LR        N S  H#  NG KTL  * V    Q IS*   CK A     H   
Conservation:  2934527886539117713938439395824655252794941524854251720228698441253132421535618885837888756211665564
SS_PSIPRED:    HH       HHHHHHHHHHH     HHHHH   HH            EEEE       EE            EEEEEE        EEEE     EE   
SS_SPIDER3:    HH       HHHHHHHHHH       HHHHHH             EEEEE       EEEE           EEEEEE        EEEE     EE   
SS_PSSPRED:             HHHHHHHHHHH    HHHHHHHH               EEEE                     EEEEEE        EEEE          
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:                           C                                   C                    C                     

                       10        20        30        40        50        60        70        80 
AA:            HQPEGCIAVEAGMDTLIMHLCEETAPENQKFILQEDGSLFHEQSKKCVQAARKESSDSFVPLLRDCTNSDHQKWFFKERML 581
BenignSAV:                                                        K                          H  
gnomAD_SAV:    Y       M #  N I I   KG V  SH      VV        RSI VV E LNNGCI P Q#  SL N  *   G#T 
Conservation:  224428423111121524129110141132516325425362141393241121212121315217111216171723222
SS_PSIPRED:          EEEE    EEEEEE         EEEE     EEE     EEEEE          EEEE    HH  EEEEEEE 
SS_SPIDER3:        EEEEEE    EEEEEE          EEE     EEE     EEEEEE       EEEEEE       EEEEEE   
SS_PSSPRED:         EEEEE     EEEE          EEEE     EEE     EEE           EEEE     HHHHHHHHHH  
DO_DISOPRED3:                                                                                   
DO_SPOTD:                                                                                       
DO_IUPRED2A:                                                                                    
DISULFID:           C              C                         C                  C