Q8IZH2  XRN1_HUMAN

Gene name: XRN1   Description: 5'-3' exoribonuclease 1

Length: 1706    GTS: 1.281e-06   GTS percentile: 0.346     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 2      gnomAD_SAV: 698      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR 100
gnomAD_SAV:        R       Q         G      ES  V       H  R     IRV V  G #  NVLR   LM GV    Q V V       Q  VK  C  
Conservation:  5646554664665476545647533677969799997977767776676777756555653366676576877767956597777797797777797977
SS_PSIPRED:      HHHHHHHHHHH    EEE          EEEE                      HHHHHHHHHHHHHHHHHHH   EEEEEEE     HHHHHHHHHH
SS_SPIDER3:      HHHHHHHHHHH   H HHHH        EEEE    EEE  E            HHHHHHHHHHHHHHHHHH    EEEEEEE      HHHHH HHH
SS_PSSPRED:        HHHHHHHHH    EEE          EEEEE                     HHHHHHHHHHHHHHHHHHH   EEEEEEEE    HHHHHHHHHH
DO_DISOPRED3:  D                                                                                                   
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                  DDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            RFRSAKEAEDKIKKAIEKGETLPTEARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRH 200
gnomAD_SAV:     V  T      T   T  AGSP   P           K L G YD       # M          V               T   T K T  N   T  R
Conservation:  7796667997957996799739737579999876999599667556969975293737549547277799976866979999976846323426546465
SS_PSIPRED:    H  HHHHHHHHHHHHHH                    HHHHHHHHHHHHHHHHHHH        EEEEE        HHHHHHHHHHHH        HHH
SS_SPIDER3:    H HHHHHHHHHHHHHHH                   HHHHHHHHHHHHHHHHHHHH  H H   EEEEE        HHHHHHHHHHHH         EE
SS_PSSPRED:    HHHHHHHHHHHHHHHHHH                   HHHHHHHHHHHHHHHHH         EEEEEE        HHHHHHHHHHHH          H
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   DDDDD       DDDDD         DD                                                  DDDDDDDDDDDD          

                       10        20        30        40        50        60        70        80        90     
AA:            CLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHL 300
gnomAD_SAV:              V   #G A          Q  DRNS WLRS  GS     R     D       #  VNFI  C V  VV G  F#   I      P  R 
Conservation:  6776767975686845653684678565475868397456777779876886858766468651461342716549477797777679979999999976
SS_PSIPRED:    HHH      HHHHHH     HHHHHHHH                 EEEEEHHHHHHHHHHHHHHHH        HHHHHHHHHHHHHHHH          
SS_SPIDER3:    EEE      HHHHHH      EEEEEEEEE  E   EE       EEEEEHHHHHHHHHHHHHHH         HHHHHHHHHHHHHHH           
SS_PSSPRED:    HH        EEE     HHHHHHHH                   HHHHHHHHHHHHHHHHHHH          HHHHHHHHHHHHHHHH          
DO_DISOPRED3:                                      DDDDD                                                           
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                     D                                                                 

                       10        20        30        40        50        60        70        80        90     
AA:            HINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWT 400
gnomAD_SAV:    L    V    C I A V S  R HV AT Y #  Q     AE     L R N    A       A  N  SG PA T AD#SS   E#Q    KT P C 
Conservation:  9966999977769952579356997894849790596886358749976975677999997977786797996992699441102022101113522242
SS_PSIPRED:         HHHHHHHHHHHHHHH            HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH       HHHH
SS_SPIDER3:         HHHHHHHHHHHHHHH    E     E HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH H   HHHHHHHHHHHHHHHHHHH H       HHHH
SS_PSSPRED:       HHHHHHHHHHHHHHHHHH           HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH  HHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHH
DO_DISOPRED3:                                                                 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                       DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            ALDKNEGEMITSKDNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKI 500
gnomAD_SAV:      EET  KV#   G         #  Q    R      IA   F IIFA  M    T  ILT     Q CC#         S   V CM  M# VGI Q 
Conservation:  3322020000002001356166665996996997939995975755665397516727965779979999999977977677577796979643531535
SS_PSIPRED:    HHHH                  HHHHHHHHHHHHHHHHHHH       HHHHHHHHHHHHHHHHHHHHHHHH    HHHH    HH HHHHHH     EE
SS_SPIDER3:    H                      HHHHHHHHHHHHHHHHHHH       HHHHHHHHHHHHHHHHHHHHHHH    H H     H HHHHHH  H   EE
SS_PSSPRED:    HH                       HHHHHHHHHHHHHHHHH       HHHHHHHHHHHHHHHHHHHHHH            HH HHHHHHH    EEE
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDD                                                                                 
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDD                                                                            
DO_IUPRED2A:            DDDDDD                                                                                     

                       10        20        30        40        50        60        70        80        90     
AA:            HFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM 600
gnomAD_SAV:    R DP   S           SV  S   V   Q LISG   VVKH LS              S  S T     *S  V K  S F  T   EG        
Conservation:  1643547959777976776767427970466299432196956599379797997979799999999796634993995345107223841882964933
SS_PSIPRED:    EE       HHHHHHH   HHHHHH  HHHHHHH      HHH      EE        EEEEEEE    HHHHHHHHHHH     HHHHHHH     EE
SS_SPIDER3:    E        HHHHHH    HHHH    HHHHHHH              EEE     EEEEEEEEEEE   HHHHHHHHHHH     HHHHHH      EE
SS_PSSPRED:    EE        HHHHHHHHHHHHHHH  HHHHHHH                          EEEEEE    HHHHHHHHHHHH    HHHHHH       E
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                        DD             

                       10        20        30        40        50        60        70        80        90     
AA:            CWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNKITRIDQKALYFCGFPTLKHIRHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDE 700
BenignSAV:                                                                              G                          
gnomAD_SAV:    Y     AD # #  R    LDVGQY A HRV A H CH HMSE   IGTH N    R      Y    I  REG I     R H   VV   F V  AEG
Conservation:  5256142341618547338627149436020554779382312204312624378878876836748563568268488777868785686720103215
SS_PSIPRED:    EEE      EEE         HHHEEEEEE     HH                            EEEEEE    EEE          EEEEE       
SS_SPIDER3:    EEE      E E          EEEEEEEE    HH                H        EEEEEEEEEE    EEE         EEEEE        
SS_PSSPRED:    EEE                  HHH    E                                  EEEEE       EEE         EEEEE        
DO_DISOPRED3:                                                                                         DDDDDDDDDDDD 
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            LTVENVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGDKEQSNWAKEVQGISEHYLRRKGIIINETSAVVYAQL 800
gnomAD_SAV:      I        RN AY    Y      MS      E    KL  S  R P      PI FR E  K   R   I      CR    MV  GS    HG  
Conservation:  2035266224964369879999699866456897377257831727449131339836522438665229187695648351799963574814667566
SS_PSIPRED:      HHHHHHHH   EEEE     EEEEEEEEE    EEEEE       EE         EEE  HHHHHHHHHHHHHHHHHHHHH       EEEEEEEEE
SS_SPIDER3:      HHHHHHHH   EEEEE   E EEEEEEEE   EEEEEE        E         EE   HHHHHHHHHHHHHHHHHHHHH       EEEEEEEEE
SS_PSSPRED:      HHHHHHHH   EEEE      EEEEEEEE   EEEEE        EE              HHHHHHHHHHHHHHHHHHHHHH       EEEEEEEE
DO_DISOPRED3:                                          D D DDD DDDDDDDD                                            
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                  DDDD       DD                                        

                       10        20        30        40        50        60        70        80        90     
AA:            LTGRKYQINQNGEVRLEKQWSKQVVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEGRIRVIFSIPCEPNLDAL 900
gnomAD_SAV:    FR C     ESD  C        AAS  #      VQS NFC  D#           I  #   T          LV MT     H      R  H  S 
Conservation:  7793685312381936698859934855596694663683634425379476862251588583868642869659297517796796745919927607
SS_PSIPRED:        EEEE    EEEEEE     EEEEEEEEEE  HHH          HHHH     EEEE        EEEEEE       EEEEEEE       HHHH
SS_SPIDER3:        EEEE     EEEEEE    EEEEEEEEEE   H E         HHHH     EEEEE       EEEEEEE     EEEEEEEE       HHHH
SS_PSSPRED:    E   EEEE    EEEEEEE      EEEEEEEE               HHH     EEEEEE        EEEEE      EEEEEEEE       HHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            IQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSRRNPHGDHKANVGLNLKFNKKNEEVPGYTKKVGSEWMYSSAAEQLLAEYLERAPELFSY 1000
gnomAD_SAV:            V  H  H STICI M      G         R  IKLP   TV             D  RCSE A       F T       F         
Conservation:  6679977667957795676797756797996797677999564755976749699999999799999999973449959936664666774674475922
SS_PSIPRED:    HHHHHHHH     HHHHHHHH   HHHHHHHH EEEEE           EEEEE EEEE          EEEE  EEEE HHHHHHHHHHHHH HHHHHH
SS_SPIDER3:    HHHHHHH      HHHHHHH    HHHHHHHEEEEEEE   EE      EEEEEEEEEE    EE   EEEEE  EEEE HHHHHHHHHHHHH HHHHHH
SS_PSSPRED:    HHHHHHHH     HHHHHHHH   HHHHHHHH EEEE            EEEE    E                  EHHHHHHHHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                  D                                                    

                       10        20        30        40        50        60        70        80        90     
AA:            IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKIEEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRD 1100
gnomAD_SAV:    VT    KG   D       #  C G    TN    R H TI  HP S     #T  LG      K W  I  D  AQL   S   H    K     S WN
Conservation:  6665546747799779754356957793993297739795225759977579935775577774363727633579779975797766777639547935
SS_PSIPRED:    HHH        HHH        HHHHHHHHHHHHH       EEEE   EE  HHHHHHHHHHHHHHH       EEEE  HHH     HH         
SS_SPIDER3:    HHH        HHH        HHHHHHHHHHHH         EEE  HHH  HHHHHHHHHHHHHHH       EEEE  HHHH               
SS_PSSPRED:    HHH                  HHHHHHHHHHHHHHH     EEEE   HHH  HHHHHHHHHHHHHHHH      EEEE  HHH                
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            AEFCLFDRVVNVRENFSVPVGLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSRSETGNQKLTAIVKPQPAVHQHSS 1200
gnomAD_SAV:     G#F      I K D    A            KT DE    I      L   KVIG      * SA SF    Y  H     #     IN LQ    RRP
Conservation:  6773779977969639799595777677666724636575886886382667247333244884834665566761706132367466576754212112
SS_PSIPRED:      EEE  EEEEE       EEEEEEEEEEE       EEEEEEE                EEEE HHHEEEE                            
SS_SPIDER3:           EEEEE      E EEEEEEEEEE       EEEEEEEEEEE    EEEE    EEEE HHHEEEE                            
SS_PSSPRED:      EE   EEEEE         EEEEEEEE        EEEEEEE                 EE    EEEE                             
DO_DISOPRED3:                                                                               DDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                                 DDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                           DDDDD   DDDDDDDDDDDDD  DDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            SSSVSSGHLGALNHSPQSLFVPTQVPTKDDDEFCNIWQSLQGSGKMQYFQPTIQEKGAVLPQEISQVNQHHKSGFNDNSVKYQQRKHDPHRKFKEECKSP 1300
BenignSAV:                                                               A                                         
gnomAD_SAV:        P    ETHH#  # F  AA    EG     S  *     A  RC  S      V  L        R I    GSG       YE#      KY   
Conservation:  1031322222377676575735442111033442368655512421120421132232267621320132142101222232447415224513131212
SS_PSIPRED:                                      HHHHH                                        HHH         HHHH     
SS_SPIDER3:                                        H                                                    HH   HH    
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDD      DDDDDDDDDD                     DDD DDDDDD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD 

                       10        20        30        40        50        60        70        80        90     
AA:            KAECWSQKMSNKQPNSGIENFLASLNISKENEVQSSHHGEPPSEEHLSPQSFAMGTRMLKEILKIDGSNTVDHKNEIKQIANEIPVSSNRRDEYGLPSQP 1400
gnomAD_SAV:       Y  E L   H     KY ST   V RA   P F   KS  K     R LTVV QV  Q      # A NR    E   S   ICP GK #    F  
Conservation:  2022112111222111445244438443131303210011011443799989669945999698964221010212021001222232021010111230
SS_PSIPRED:                    HHHHHHHH                          HHHHHHHHHHHHH           HHHHH                     
SS_SPIDER3:                     HHHHHHH                        HHHHHHHHHHHHHHH           HHHHHH                    
SS_PSSPRED:                    HHHHHHHH                           HHHHHHHHHHHH                                     
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:     DDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD   DDD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:                                                     S                                                    

                       10        20        30        40        50        60        70        80        90     
AA:            KQNKKLASYMNKPHSANEYHNVQSMDNMCWPAPSQIPPVSTPVTELSRICSLVGMPQPDFSFLRMPQTMTVCQVKLSNGLLVHGPQCHSENEAKEKAALF 1500
gnomAD_SAV:     P      C S   R S  R   FVNDVF L   R  H   L     Q Y      HLY  L T    T#IG    P    IL   W      E ET  L
Conservation:  3225533213312212220101223101224112312122435569233923265249584542449333466758669836488575662665556643
SS_PSIPRED:        HHHHH                                HHHHHHHHHHH                EEEEEEE     EE       HHHHHHHHHHH
SS_SPIDER3:         HHHH         HHH                     HHHHHHHHHH         HE     EEEEEEE     EEE      HHHHHHHHHHH
SS_PSSPRED:       HHHHHH                                 HHHHHHHHHH                EEEEEEEE             HHHHHHHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                               DDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                 DDDD  
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDD DDDDD    DDDDDD     D                                           DDDD    DD      

                       10        20        30        40        50        60        70        80        90     
AA:            ALQQLGSLGMNFPLPSQVFANYPSAVPPGTIPPAFPPPTGWDHYGSNYALGAANIMPSSSHLFGSMPWGPSVPVPGKPFHHTLYSGTMPMAGGIPGGVHN 1600
gnomAD_SAV:      KL S     SLS        SL #   A # G L S  *      CT  V    ALL     L LRA LMQ    LVRY  H  AV#V#   LRC   
Conservation:  5765945362554334345433332542434234625332222222222222533354534342413832223331325122244321201222325265
SS_PSIPRED:    HHHHHH                                                                                              
SS_SPIDER3:    HHHHHHH                                                                                             
SS_PSSPRED:    HHHHH                                                                                               
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DBB
DO_SPOTD:                       DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                DDDDDDDD                             DD        D DD DD DDD  DD   DD  D 

                       10        20        30        40        50        60        70        80        90     
AA:            QFIPLQVTKKRVANKKNFENKEAQSSQATPVQTSQPDSSNIVKVSPRESSSASLKSSPIAQPASSFQVETASQGHSISHHKSTPISSSRRKSRKLAVNFG 1700
gnomAD_SAV:     V#SP   E   T  N I # A H    I F     EC SN#R   W #P T  EA L   SV   *A#I PR  GV  R  I N              D
Conservation:  8756868665544333314153112012111110010000011001121111302222011200111101221111022032141144555278965673
SS_PSIPRED:        HHH    HH       HHHH                                                                     HHHHH  
SS_SPIDER3:     E    E             HHH                                         H                            HEHEE  
SS_PSSPRED:                                                                                                  EEEE  
DO_DISOPRED3:  D   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DD     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   D   DDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:                                                  S                                                       

                     
AA:            VSKPSE 1706
gnomAD_SAV:    I  T  
Conservation:  236334
SS_PSIPRED:          
SS_SPIDER3:          
SS_PSSPRED:          
DO_DISOPRED3:  DDDDDD
DO_SPOTD:      DDDDDD
DO_IUPRED2A:   DDD  D