Q8N0V4  LGI2_HUMAN

Gene name: LGI2   Description: Leucine-rich repeat LGI family member 2

Length: 545    GTS: 1.481e-06   GTS percentile: 0.439     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 2      gnomAD_SAV: 232      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MALRRGGCGALGLLLLLLGAACLIPRSAQVRRLARCPATCSCTKESIICVGSSWVPRIVPGDISSLSLVNGTFSEIKDRMFSHLPSLQLLLLNSNSFTII 100
gnomAD_SAV:        T    #  VVP        TAQ  *     # S       Q VV        S LSS VTF R   VM  KM #GV       K     YKL M V
Conservation:  1111111111111111111111111000000011111013121111001010001100140110102123221022011120113032314232312112
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                        
SS_PSIPRED:             HHHHHHHHHHHHHH   HH            EEE  EEE               EEEEEE                   EEE       EE
SS_SPIDER3:             HHHHHHHHHH H     HHH           EEE  EEEE              EEEEEE  E  E             EEEE   E EE 
SS_PSSPRED:             HHHHHHHHHHHHH                       EEEE              EEEEE          HHH      HHHHHH     EE
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                        
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                       
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                                           N                              

                       10        20        30        40        50        60        70        80        90     
AA:            RDDAFAGLFHLEYLFIEGNKIETISRNAFRGLRDLTHLSLANNHIKALPRDVFSDLDSLIELDLRGNKFECDCKAKWLYLWLKMTNSTVSDVLCIGPPEY 200
gnomAD_SAV:    WNN     L          E *A *    H  C     A     L T       V  C T    G  N K    T    R    I T I  MP V  AD 
Conservation:  0212304312435666527241234215646863535576447352175534702434622377666050739325773184115854422207037002
SS_PSIPRED:                EEE       EE            EEE                     EEE           HHHHHHHHHH             HHH
SS_SPIDER3:                EEEE  EE EEE   H        EEEE    EEE             EEE           HHHHHHHHHH       EEE      
SS_PSSPRED:      HHH       EEEE    EEEE HHHH                               EEE           HHHHHHHHHHH            HHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                                                           N              

                       10        20        30        40        50        60        70        80        90     
AA:            QEKKLNDVTSFDYECTTTDFVVHQTLPYQSVSVDTFNSKNDVYVAIAQPSMENCMVLEWDHIEMNFRSYDNITGQSIVGCKAILIDDQVFVVVAQLFGGS 300
gnomAD_SAV:     KNR  EL NLHC  IA#  AA *         GM        M  V   TD  V    VY  IS Q#  # PRE L#       G * S #    YSV 
Conservation:  2311311312011272243721121303354645350301414453546224181543875532065133161527351964344111455644696358
SS_PSIPRED:        HH              EEE                   EEEEE       EEEEE                   EEEEEEE  EEEEEE       
SS_SPIDER3:       EHHH                                   EEEEE       EEEEE    E EE          EEEEEEEE  EEEEEE  E    
SS_PSSPRED:                         EEE                   EEE          EE                     EEEEE    EEEEEEE     
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                                            N                             

                       10        20        30        40        50        60        70        80        90     
AA:            HIYKYDESWTKFVKFQDIEVSRISKPNDIELFQIDDETFFVIADSSKAGLSTVYKWNSKGFYSYQSLHEWFRDTDAEFVDIDGKSHLILSSRSQVPIILQ 400
gnomAD_SAV:    YV R EK  N IAN *HVQ  S  E S  K   TNNKM  FVS G NS              P  L  K S  MEV    LN    I    C       *
Conservation:  3745330022492449245113559984463705213158445546658056584742287633636819489664544422243265559478184565
SS_PSIPRED:     EEE        EE     HHH       EEEEE   EEEEEE          EEE           HHHH      EEE    EEEEE       EEEE
SS_SPIDER3:    EEEE      EEEEE    HHH      EEEEEE   EEEEEE         EEEE          HHHHHH     EEEE   EEEEE       EEEE
SS_PSSPRED:     EE                          EEEEE    EEEE          EEEE          HHHHHHH    EE      EEEE       EEEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            WNKSSKKFVPHGDIPNMEDVLAVKSFRMQNTLYLSLTRFIGDSRVMRWNSKQFVEIQALPSRGAMTLQPFSFKDNHYLALGSDYTFSQIYQWDKEKQLFK 500
BenignSAV:                                                Q       R                                                
gnomAD_SAV:    G     N  #RD   ST #I      Q H N     IH T#  QLR     K MDNHP Q QR#T   S      Y            LC  Y K   LQ
Conservation:  8442121810213322217522765802212156553366999644392110605381386586533394031021443556553553541630110050
SS_PSIPRED:    EE     EE        HHHEEEEEEEE   EEEEEE       EE       EEEEE      EEE  EEE   EEEE       EEEEEEE    EEE
SS_SPIDER3:    EE    EEEE      HHHEEEEEEEEE  EEEEEE E      EEEE    EEEEEE       EE  EEE   EEEEE     EEEEEEEE    EEE
SS_PSSPRED:    E               HHHHHHHHHEEE  EEEEEEE       EE     HHHHHHH       EE        EEEE       EEEEE   HH HHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:       N                                                                                                  

                       10        20        30        40     
AA:            KFKEIYVQAPRSFTAVSTDRRDFFFASSFKGKTKIFEHIIVDLSL 545
gnomAD_SAV:      R*    V #    F AY#   I          T   T  N*  
Conservation:  134322334873701322210133424534515133251145341
SS_PSIPRED:    EEEEE       EEEEEE  EEEEEEE      EEEEEEEEE   
SS_SPIDER3:    EEEEE        EEEEE  EEEEEEE     EEEEEEEEE   H
SS_PSSPRED:    HHHH          EEE    EEEEEE        EEEEEEE   
DO_DISOPRED3:                                               
DO_SPOTD:                                                   
DO_IUPRED2A: