Q8N6Y1  PCD20_HUMAN

Gene name: PCDH20   Description: Protocadherin-20

Length: 951    GTS: 1.77e-06   GTS percentile: 0.567     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


            gnomAD_SAV: 461      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MRGRGNARSSQALGVSWCPATWHPRLDMGRLHRPRSSTSYRNLPHLFLFFLFVGPFSCLGSYSRATELLYSLNEGLPAGVLIGSLAEDLRLLPRSAGRPD 100
gnomAD_SAV:    TSR*  VCRLR  RMNRRR    Q   T        RIR    L        #R VCY WN  W        K    SRLI #  DK  PQ S#PS  #V
Conservation:  2221101001111000010000100111100000000000000123243353335316552353835638444766837138933404616121122112
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS                                        
SS_PSIPRED:                                          HH   HHHHHHHHHHHHHHHH       EEEEEE       EEEE HHHH            
SS_SPIDER3:                                               HHHHHHHHH HHHH         EEEEEE        EEE HHHH            
SS_PSSPRED:                                                HHHHHHHHHHHHH         EEEEE         EEEHHHHHH           
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDBBB  DDD DD                                           
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                   DDDD
DO_IUPRED2A:   DDDD                        D    D                                                          DD DDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            PQSQLPERTGAEWNPPLSFSLASRGLSGQYVTLDNRSGELHTSAQEIDREALCVEGGGGTAWSGSVSISSSPSDSCLLLLDVLVLPQEYFRFVKVKIAIR 200
gnomAD_SAV:      L  S G#    D RV      Q PN #HL   SGYAK QA        V  A AS R EGIRT PVP   FE    QM  F     C K      TVK
Conservation:  2222222111001132348462412143478184425837398314699938923103222233223435430229253797669986696769665273
SS_PSIPRED:                     EEEEEE       EEE     EEEE      HHHHHH                     EEEEEEEEE      EEEEEEEEEE
SS_SPIDER3:                     EEEEEE      EEEEE     EEE    E HHHH                       EEEEEEEEE      EEEEEEEEEE
SS_PSSPRED:                     EEEEEE     EEEEEE    EEEE   HHHHHHHH                      EEEEEEEEE    EEEEEEEEEEEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:      DDDD                                                                                                
DO_IUPRED2A:   DDDDDDDDDD                                                      D                                   
CARBOHYD:                                        N                                                                 

                       10        20        30        40        50        60        70        80        90     
AA:            DINDNAPQFPVSQISVWVPENAPVNTRLAIEHPAVDPDVGINGVQTYRLLDYHGMFTLDVEENENGERTPYLIVMGALDRETQDQYVSIIIAEDGGSPPL 300
gnomAD_SAV:     LS KV R A   MWMC S D    #  ##D T   #A RT E       Y QR    GM G    KLAL I   S  NK S  R M   T        F
Conservation:  9799739099323505379996356583569559297817256675959254443989779575387389588643099991323836264999893956
SS_PSIPRED:                 EEEEE                         EEEEEE      EEEEEEE     EEEEEEE          EEEEEEEEEE      
SS_SPIDER3:    E           EEEEEE        EEE             E EEEEEE    EEEEEEEE     EEEEEEE          EEEEEEEEEE     E
SS_PSSPRED:    EE           EEEEEE       EE                EEEEE       EEEEE         EEEE        HHHHEEEEEEEE      
DO_DISOPRED3:     D                                                                                                
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                              DDD                                                          D           

                       10        20        30        40        50        60        70        80        90     
AA:            LGSATLTIGISDINDNCPLFTDSQINVTVYGNATVGTPIAAVQAVDKDLGTNAQITYSYSQKVPQASKDLFHLDENTGVIKLFSKIGGSVLESHKLTILA 400
gnomAD_SAV:     SG   IF VG  K K  V # P   ANLC    MD TTP   S    F              RRT  HV # N S      IG    N PD#  FI F 
Conservation:  3947664716397998991913544547525937291265253819193818725295785783214425929532392637412431241116674697
SS_PSIPRED:     EEEEEEEEEE            EEEEEEE       EEEEEEEE       EEEEEEE     HHHHHH        EEEE          EEEEEEEE
SS_SPIDER3:    E EEEEEEEEEE       E   EEEEEE        EEEEEE         EEEEEEE     HHHHHH EE      EEE EE       EEEEEEEE
SS_PSSPRED:      EEEEEEEEEEE          EEEEEEE       EEEEEEE        EEEEEEE     HHHHHHH       EEEEE         EEEEEEEE
DO_DISOPRED3:                DDDD   D                                                                              
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                               N     N                                                                    

                       10        20        30        40        50        60        70        80        90     
AA:            NGPGCIPAVITALVSIIKVIFRPPEIVPRYIANEIDGVVYLKELEPVNTPIAFFTIRDPEGKYKVNCYLDGEGPFRLSPYKPYNNEYLLETTKPMDYELQ 500
gnomAD_SAV:    D  A T  I P F  VT     S  F LH V   TG   F    K IHALVV     NT D      HPED  S GV S   HS         LIY   E
Conservation:  4856958446351536443233983645979827246563549687316969879645340333429295518895635841425988998532896913
SS_PSIPRED:    E      EEEEEEEEEE       EEEEEEE      EEEEE       EEEEEEEE      EEEEEE     EEEEE      EEEEEE         
SS_SPIDER3:    E      EEEEEEEEEEE      EEEEEEEE      EEE        EEEEEEEE      EEEEEE      EEEE E    EEEEEE         
SS_PSSPRED:    E      EEEEEEEEEEEEE     EEEEEEE      EEE        EEEEEEEE      EEEEEE                EEEEE          
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            QFYEVAVVAWNSEGFHVKRVIKVQLLDDNDNAPIFLQPLIELTIEENNSPNAFLTKLYATDADSEERGQVSYFLGPDAPSYFSLDSVTGILTVSTQLDRE 600
gnomAD_SAV:        L   V*  GE#Y    T A I        VCF  ST  IV        LF   S  V  IK#    L   E     C FS G     I     VQ 
Conservation:  4084536542411621233154444484999495913223442458882653774662949397415926183952448249167205968285449999
SS_PSIPRED:     EEEEEEEEEE     EEEEEEEEEE            EEEEEEE       EEEEEEEE       EEEEEEE      EEEEE    EEEE       
SS_SPIDER3:      EEEEEEEE      EEEEEEEEEE  E     E   EEEEEEE       EEEEEEEE      EEEEEEEE      EEEEE    EEEEEE   H 
SS_PSSPRED:     EEEEEEEEEE       EEEEEEEE            EEEEEEE        EEEEEE          EEEEE      EEEE     EEEEEE   HH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                        D                              

                       10        20        30        40        50        60        70        80        90     
AA:            EKEKYRYTVRAVDCGKPPRESVATVALTVLDKNDNSPRFINKDFSFFVPENFPGYGEIGVISVTDADAGRNGWVALSVVNQSDIFVIDTGKGMLRAKVSL 700
gnomAD_SAV:      D H H L         S ALS       VE   N L  Y GI LS    L D S   I G     P # R  TF   D N #S V     I       
Conservation:  5564956365939281935864887265849599969586588969979966635687745563757352684455853636537576453629655467
SS_PSIPRED:    EEEEEEEEEEEEE      EEEEEEEEEEE       EE                 EEEEEEEEE      EEEEEEE      EEE     EEEE    
SS_SPIDER3:     EEEEEEEEEEEE     EEEEEEEEEEEE       EEE                EEEEEEEEE     EEEEEEEEE     EEEE    EEEEE E 
SS_PSSPRED:    HHHHHHEEEEEE         EEEEEEEEE                           EEEEEEEE      EEEEEEEEE    EEEE    EEEE    
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                             D                                                                         
CARBOHYD:                                                                                     N                    

                       10        20        30        40        50        60        70        80        90     
AA:            DREQQSSYTLWVEAVDGGEPALSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDTGMNAVIAYSIIGRRGPRPESFRIDPK 800
gnomAD_SAV:        E  H# *     RVD P  FKT         S D       R  V#            LL         KD   L         VS  V   FNSN
Conservation:  7776666926677949993947853537778989799989499999993977989959399757799997969999999969897585775547939851
SS_PSIPRED:     HH   EEEEEEEEEE      EEEEEEEEEEE       EEE       EEE         EEEEEEEEE     EEEEEEEE          EEE   
SS_SPIDER3:     H   EEEEEEEEEEE  E  EEEEEEEEEEEE       EEE       EEEE        EEEEEEEEE     EEEEEEEEEEE      EEEE   
SS_PSSPRED:          EEEEEEEEEE         EEEEEHHHH                EEEE        EEEEEEEEE      EEEEEEEE           E   
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                    D                          D DDDDD 
CARBOHYD:                                                     N                                                    

                       10        20        30        40        50        60        70        80        90     
AA:            TGNITLEEALLQTDYGLHRLLVKVSDHGYPEPLHSTVMVNLFVNDTVSNESYIESLLRKEPEINIEEKEPQISIEPTHRKVESVSCMPTLVALSVISLGS 900
gnomAD_SAV:           DV       RYH  L    R   KT Y   I K SDK   G    FD    N LDTKTQ   S N   L  K  K MP IL  I PC MG  C
Conservation:  8999993639645359967979996989498995677498798978658977756993532332454216221132143203015922365385336546
STMI:                                                                                                    MMMMMMMMMM
SS_PSIPRED:      EEEE           EEEEEEEEE       EEEEEEEEEEE     HHHHHHHH                          HHHHHHHHHHHHHHHHH
SS_SPIDER3:       EEE EE       E EEEEEEEE  EE   EEEEEEEEEEE      HHHHHHH       HHH                  HHHHHHHHHHHHHHH
SS_PSSPRED:       EHHHHHHHHH     EEEEEEEE        EEEEEEEEEE      HHHHHHH                           HHHHHHHHHHHHHHHH
DO_DISOPRED3:                                                         DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                        DDDDD D DDDDDD                    
DO_IUPRED2A:                                                                     DDDDDDDDDDDDD                     
CARBOHYD:        N                                        N    N                                                   

                       10        20        30        40        50 
AA:            ITLVTGMGIYICLRKGEKHPREDENLEVQIPLKGKIDLHMRERKPMDISNI 951
gnomAD_SAV:       A VLD  T IK#E   S Q#   K  VTM # MYSRL*K M IG  #N
Conservation:  522432622466335143112123114443654021201115643212435
STMI:          MMMMMMMMMMM                                        
SS_PSIPRED:    HHHHHHHHHHHHHHH          EEEE           EEEEEEE    
SS_SPIDER3:    HHHHHHHHHHHHHH        H   EEE            EEEEEE    
SS_PSSPRED:    HHHHHHHHHHHHHHH          EEEEE                     
DO_DISOPRED3:  DDDDDDDDD   D  D                             D DDDD
DO_SPOTD:                                                     DDDD
DO_IUPRED2A:                         DDDDD                     DDD