Q8NB78  KDM1B_HUMAN

Gene name: KDM1B   Description: Lysine-specific histone demethylase 1B

Length: 822    GTS: 1.583e-06   GTS percentile: 0.484     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 1      gnomAD_SAV: 324      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MATPRGRTKKKASFDHSPDSLPLRSSGRQAKKKATETTDEDEDGGSEKKYRKCEKAGCTATCPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYY 100
BenignSAV:                                       I                                                                 
gnomAD_SAV:    V A WR RNER  S#Y L R L  N S  V   VIDA ED GGRV    C       FMV#R M   N Y       *    #YI    L          
Conservation:  1231716175421042216323275556516773172246556202567696999799542676965634577767797999779999977797999669
SS_PSIPRED:                               HHHHHHH                              EEEEE HHHHH      EEEE    EE HHHHHHHH
SS_SPIDER3:                               HHHHHH              HH  HHHH        EEEEEH HHHH    E  EEEE       HHHHHHHH
SS_PSSPRED:                              HHHHHHH                               EEE HHHHHHH      EEEE       HHHHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD   D                                      
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                  
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DD                                                      
METAL:                                                             C    C      C       C          H     H C  C     
MODRES_P:                  S   S        S                                                                          

                       10        20        30        40        50        60        70        80        90     
AA:            RSHKDGYDKYTTWKKIWTSNGKTEPSPKAFMADQQLPYWVQCTKPECRKWRQLTKEIQLTPQIAKTYRCGMKPNTAIKPETSDHCSLPEDLRVLEVSNHW 200
gnomAD_SAV:     I NG   R AA  N# S S  AK  #    E  H  C A   I    R  * SR #HF  P VEI * SI    PL  K  N Y   V   IM    LC
Conservation:  9977695747229763973797479967967977579675685535958985566536673236257369381332281524628348665995672336
SS_PSIPRED:    H     HHHHHHHHHHHHH       HHHHHHH    EEEE                   HHHHHH                      HHHHHHH   HH
SS_SPIDER3:           HHHHHHHHHHHH       HHHHH      EEHE        E          HHHHHH                         EEEEE   H
SS_PSSPRED:    H     HHHHHHHHHHHH        HHHHHHHHHHHEEEEE                  HHHHHH                       HHHHHHH  HH
DO_DISOPRED3:                                                                              DDDDDDDDDDDDD           
DO_SPOTD:                                                                               DDDDDDDDDDDDD              
DO_IUPRED2A:                                                                                  D                    
METAL:                                                  C    C                     C               C               
ZN_FING:                                       DQQLPYWVQCTKPECRKWRQLTKEIQLTPQIAKTYRCGMKPNTAIKPETSDHCSLPEDLRV       

                       10        20        30        40        50        60        70        80        90     
AA:            WYSMLILPPLLKDSVAAPLLSAYYPDCVGMSPSCTSTNRAAATGNASPGKLEHSKAALSVHVPGMNRYFQPFYQPNECGKALCVRPDVMELDELYEFPEY 300
gnomAD_SAV:    * CTF  TS   H M V        Y   #        H T PVS T     Y    F MPI  V *   TLCE    V            G        
Conservation:  7357775997696947366916999999999964424201033233201416213112021534443797999997999999779997999999979997
SS_PSIPRED:    HHH             HHHHHHH                                           HH           HH    HHH  HHHHHH HHH
SS_SPIDER3:    HHHHH           HHHHH H                                                     HHHHHH   HHH  HHHHHH  HH
SS_PSSPRED:    HHHHHH          HHHHHHH                                                      HHHHH        HHHHHH HHH
DO_DISOPRED3:                                 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                       
DO_SPOTD:                                   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                   
DO_IUPRED2A:                                         DD D  DDD                                                     
REGION:                                                                                YQPNECGKALCVRPDVMELD        
MODRES_P:                                                    S                                                     

                       10        20        30        40        50        60        70        80        90     
AA:            SRDPTMYLALRNLILALWYTNCKEALTPQKCIPHIIVRGLVRIRCVQEVERILYFMTRKGLINTGVLSVGADQYLLPKDYHNKSVIIIGAGPAGLAAARQ 400
gnomAD_SAV:         T  G   I  T  H     TPIA  RM  VFIQ  #H   I       C  SK        FGME NR IF  EH S P   V#S A   V  K 
Conservation:  9799979999979697294229444543245212635588486465383366626546698686838143212259930521547456756569766546
SS_PSIPRED:    H   HHHHHHHHHHHHHHHH       HHHHHHH        HHHHHHHHHHHHHHHH   HHEE                  EEEEE   HHHHHHHHH
SS_SPIDER3:       HHHHHHHHHHHHHHHHH    E  HHHHHHH        HHHHHHHHHHHHHHHH   EEEEEE                EEEEE   HHHHHHHHH
SS_PSSPRED:         HHHHHHHHHHHHHHHHHHHH  HHHH           HHHHHHHHHHHHHHHHH  EEE                   EEEEE   HHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
NP_BIND:                                                                                         KSVIIIGAGPAGLAAARQ

                       10        20        30        40        50        60        70        80        90     
AA:            LHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCINNPVALMCEQLGISMHKFGERCDLIQEGGRITDPTIDKRMDFHFNALLDVVSEWRKD 500
gnomAD_SAV:     #       F   Q     * R    SE I L K T   S  V    T V V    # RT E G       V   NH V  #           AY     
Conservation:  6477734924797569699999960652942593779997996999555755524327454757977467592259555996669777649767769979
SS_PSIPRED:    HHH    EEEE                   EEE   EEE      HHHHHHHHH   EEE                HHHHHHHHHHHHHHHHHHHHHHHH
SS_SPIDER3:    HHH   EEEEEEE    EEEEEEE     EEEEE EEEE      HHHHHHHHH  EEEE     E E     E  HHHHHHHHHHHHHHHHHHHHHHHH
SS_PSSPRED:    HHHH  EEEEEE                  EEE   EEE      HHHHHHHHH    EE                HHHHHHHHHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
NP_BIND:       LHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIV                                                             
REGION:                                             IVNGCINNPVALMCEQLGISMHKFGERCDL                   FNALLDVVSEWR  

                       10        20        30        40        50        60        70        80        90     
AA:            KTQLQDVPLGEKIEEIYKAFIKESGIQFSELEGQVLQFHLSNLEYACGSNLHQVSARSWDHNEFFAQFAGDHTLLTPGYSVIIEKLAEGLDIQLKSPVQC 600
gnomAD_SAV:      H  G      T   S   V   D R                 C        LP HL     Y S          S  LLV D  G    V PQ   R 
Conservation:  7372592796564275342732673457347945977796799977776391599967999976999949996762099325425665467755226731
SS_PSIPRED:              HHHHHHHHHHHHHH     HHHHHHHHHHHHHHHHHH   HHH           HHH     EEE   HHHHHHHHH           EE
SS_SPIDER3:              HHHHHHHHHHHHH      HHHHHHHHHHHHHHHHHE        H H      HHH     EEE   HHHHHHHHH     E    EEE
SS_PSSPRED:    H         HHHHHHHHHHHHHH     HHHHHHHHHHHHHHHHHH                HHH      EEE   HHHHHHHHHH         EEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:                                                                                                        V  
REGION:                                                                       FFA                                  

                       10        20        30        40        50        60        70        80        90     
AA:            IDYSGDEVQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDM 700
gnomAD_SAV:          QM   A  D A   R #    S     T G E   L     L*      TD    TV H LF      A        I  R       TMYC  
Conservation:  7665631516221271022556797649944995415392747677929975699596797657497279953665667799666523347969467995
SS_PSIPRED:    EE    EEEEEE    EEEE EEEEE  HHHHH    EE     HHHHHHHHH    EE EEEEE            EEEEEE    HHH   EEEEEEE
SS_SPIDER3:    EEE    EEEEE    EEEEEEEEEEE HHH     EEE     HHHHHHHHH       EEEEE           EEEEEEE     HH  EEEEEEEE
SS_PSSPRED:    EE    EEEEEE    EEEEEEEEEEE HHHHH    E      HHHHHHHHHH   HHHEEEEE            EEEE            EEEEEE 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            DPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEATNRH 800
gnomAD_SAV:     S  Q #M   #  RQ LTC     NQ AV  WT # Q  LR R      EC L W  I L M T  GS   RV W    TT   SE  IILT       
Conservation:  2744215799775596640242164624622294139665747777947125769493170947769777754779979954997566245767766774
SS_PSIPRED:          EEEEEEEEHHHHHHHH   HHHHHHHHHHHHHHHH         EEEE                     HHHHHHHH      EEE        
SS_SPIDER3:    E      EEEEEE  HHHHHHH   HHHHHHHHHHHHHHH          EEEE              E      HHHHHHHH      EEE        
SS_PSSPRED:           EEEEEE HHHHHHHHH  HHHHHHHHHHHHHHH          EEEE          EE         HHHHHHHHHH    EEEE       
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:                                                                                                     E     
REGION:                                                                                                         NRH

                       10        20  
AA:            FPQTVTGAYLSGVREASKIAAF 822
gnomAD_SAV:    L R I       I   N   T 
Conservation:  5765634359563534444222
SS_PSIPRED:      HHHHHHHHHHHHHHHHHH  
SS_SPIDER3:     HHHHHHHHHHHHHHHHH    
SS_PSSPRED:        HHHHHHHHHHHHHHHHH 
DO_DISOPRED3:                        
DO_SPOTD:                            
DO_IUPRED2A:                         
NP_BIND:         QTV                 
REGION:        FPQTVTGAYLSGVR