Q8NFW1  COMA1_HUMAN

Gene name: COL22A1   Description: Collagen alpha-1(XXII) chain

Length: 1626    GTS: 2.323e-06   GTS percentile: 0.759     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 6      gnomAD_SAV: 1007      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MAGLRGNAVAGLLWMLLLWSGGGGCQAQRAGCKSVHYDLVFLLDTSSSVGKEDFEKVRQWVANLVDTFEVGPDRTRVGVVRYSDRPTTAFELGLFGSQEE 100
gnomAD_SAV:      SVQ  TA      V    RV S    #G  Q I                G    FQ      L   K DA S    LM   NQSIK  GV FLAW   
Conservation:  2200000001113121312000202023546795969994756667467733574665497545777957423476679746662632562942427333
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                         
SS_PSIPRED:       HHHHHHHHHHHHHHHHH    HHHH       EEEEEEEEE       HHHHHHHHHHHHHHHHH      EEEEEEEE      EEE      HHH
SS_SPIDER3:         HHHHHHHHHHHHH       H         EEEEEEEEE      HHHHHHHHHHHHH   EEEE    EEEEEEE     E EEEE     HHH
SS_PSSPRED:        HHHHHHHHHHHHHHH               EEEEEEEEEE          HHHHHHHHHHHH EE     EEEEEEEE     EEEE      HHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                       
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDD                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            VKAAARRLAYHGGNTNTGDALRYITARSFSPHAGGRPRDRAYKQVAILLTDGRSQDLVLDAAAAAHRAGIRIFAVGVGEALKEELEEIASEPKSAHVFHV 200
gnomAD_SAV:      V SQHV  # D IS  ES C  M CR #LQ SR  GH#T#  E V   H #NRE LVY VVT Q#TS L  TMS DK    K # #T Q * V#I   
Conservation:  5418831616269653665664644125821128555122336584675556465836424603531454645355462454366344352833562655
SS_PSIPRED:    HHHHHHH          HHHHHHHEEEEE               EEEEEE         HHHHHHHH    EEEEEE   HHHHHHHHH    HHHH EE
SS_SPIDER3:    HHHHHH          H HHHHHHHHHH                EEEEEEE       HHHHHHHHH   EEEEEEE    HHHHHHH        EEEE
SS_PSSPRED:    HHHHHHHHHH       HHHHHHHHHHEE               EEEEEE       HHHHHHHHHHH  EEEEEEE    HHHHHHH        EEEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                     D                                                                 

                       10        20        30        40        50        60        70        80        90     
AA:            SDFNAIDKIRGKLRRRLCENVLCPSVRVEGDRFKHTNGGTKEITGFDLMDLFSVKEILGKRENGAQSSYVRMGSFPVVQSTEDVFPQGLPDEYAFVTTFR 300
gnomAD_SAV:     N SV # MWD  WH#         IHI   H    SAR #  AD   #VV    K   T*     G C QLV LS     GYML #  R G T   ALQ
Conservation:  4653656453325545864487876556344483232332157696666336352136305122234454546536464284465359975575565776
SS_PSIPRED:        HHHHHHHHHHHHHHH            EEEE             EEE    HHH                                          
SS_SPIDER3:        HHHHHHHHHH H                EEE       E   EEEE    HH            E E                             
SS_PSSPRED:    E   HHHHHHHHHHHHH                                E                                                  
DO_DISOPRED3:                                    DD DDDDDDDDDDDDDD                         DDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                 D DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                    D                                                                  

                       10        20        30        40        50        60        70        80        90     
AA:            FRKTSRKEDWYIWQVIDQYSIPQVSIRLDGENKAVEYNAVGAMKDAVRVVFRGSRVNDLFDRDWHKMALSIQAQNVSLHIDCALVQTLPIEERENIDIQG 400
BenignSAV:                        G                                                                                
gnomAD_SAV:     K   Q G  C   ATNE G A    W G    TIKFDTM S E V  MI * FQ S F EQA     VN RV  F   T  V    IS K GK   V D
Conservation:  6762975779757674756777796569895676697676952388964565311723696939984534735137696579155265554447663438
SS_PSIPRED:                 EE                  EE            EE              HHHHHHHHH      EE                    
SS_SPIDER3:               EEEE        EE        EE              E             HHHHH        EEE                     
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDD          DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD 
DO_SPOTD:      DDDDDDDDDDD     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                                                N                         

                       10        20        30        40        50        60        70        80        90     
AA:            KTVIGKRLYDSVPIDFDLQRIVIYCDSRHAELETCCDIPSGPCQVTVVTEPPPPPPPQRPPTPGSEQIGFLKTINCSCPAGEKGEMGVAGPMGLPGPKGD 500
gnomAD_SAV:    QS  VRHF N  ST    LQ   C GW PT    YY  SL   *    R R LASQ# W S L  KHLEC EA T #   * #A      SVVI     H
Conservation:  5563876658878678696654688856475566988562689232536525222211026312364221224377793292595181191092192482
SS_PSIPRED:     EE              HHH EE    HHHHH                                                                    
SS_SPIDER3:     E E             HHHH E   HHHH H                                                                    
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  D                     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                              DDDDDDDDDDDDDDDDDDDDDDDD D            DD DDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            IGAIGPVGAPGPKGEKGDVGIGPFGQGEKGEKGSLGLPGPPGRDGSKGMRGEPGELGEPGLPGEVGMRGPQGPPGLPGPPGRVGAPGLQGERGEKGTRGE 600
gnomAD_SAV:    VEG# L STS RN     M  AT V  D  K CF   ASATV  DR VI  QQED  *LV LD  STQ L   S F RR  H R#AVF  DQSGREIQ  
Conservation:  0601800911815937831412132284394451081561252172461262171190071392171270261191381271253261060263361061
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            KGERGLDGFPGKPGDTGQQGRPGPSGVAGPQGEKGDVGPAGPPGVPGSVVQQEGLKGEQGAPGPRGHQGAPGPPGARGPIGPEGRDGPPGLQGLRGKKGD 700
gnomAD_SAV:       Q  H  S NA   E     S  A  ET      M  #  L      M RD S   # TL  GS K SRS LV W S#D  SKH TS  HRFP    G
Conservation:  1831824834862602713602821814820615723852644826723331453674150252473272183382292293080181473284454675
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            MGPPGIPGLLGLQGPPGPPGVPGPPGPGGSPGLPGEIGFPGKPGPPGPTGPPGKDGPNGPPGPPGTKGEPGERGEDGLPGKPGLRGEIGEQGLAGRPGEK 800
BenignSAV:       T                                D                          L                                     
gnomAD_SAV:    IRTR        RS# *# A SA H LRC LVFSAD SIL E#E S  M##A N E   L  LT A    R# #       TDPQ# TW*H#MT Q RGT
Conservation:  0725721622632741743613712611724553763724771812822827824512714812703611734723724723924831924933912833
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DBBB D   DDDDDDDDD      DD     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            GEAGLPGAPGFPGVRGEKGDQGEKGELGLPGLKGDRGEKGEAGPAGPPGLPGTTSLFTPHPRMPGEQGPKGEKGDPGLPGEPGLQGRPGELGPQGPTGPP 900
gnomAD_SAV:      #      DL           KR GP FL PN  Q KN   V V  AR S SIYV I#RSQK#R#  H V R NL R R LR   H V #V   S  LL
Conservation:  9329249129119027348027337007116236335248338328578284223123426215412635747742701621622714722621843712
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            GAKGQEGAHGAPGAAGNPGAPGHVGAPGPSGPPGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGDPGAPGLPGPPGKGKDGEPGLRGSPGLPGP 1000
BenignSAV:                                          D                                                              
gnomAD_SAV:         Q  L P    A AVS RY SDAS    #   DD V       # AC K  #P D  C  LF  SV#  GS F  LLR R Y  LEFSE      H
Conservation:  8259319118118118228228217358238468226248107256118248555217238119218328349127148256383371282392591394
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            LGTKAACGKVRGSENCALGGQCVKGDRGAPGIPGSPGSRGDPGIGVAGPPGPSGPPGDKGSPGSRGLPGFPGPQGPAGRDGAPGNPGERGPPGKPGLSSL 1100
gnomAD_SAV:     R  S *R I       V  HR   NQ T  T   S  H   DV D  L   CR  E RRYLR *    Y  S  S VQED Q  AR TES S LDFYL 
Conservation:  2912222222222222222222288238248147268257147351183274282191182272371382483274484483893584183485862331
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDD   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            LSPGDINLLAKDVCNDCPPGPPGLPGLPGFKGDKGVPGKPGREGTEGKKGEAGPPGLPGPPGIAGPQGSQGERGADGEVGQKGDQGHPGVPGFMGPPGNP 1200
BenignSAV:                N                                                                                        
gnomAD_SAV:    P  VNV   V NM D YS  SQA  R LD   H  IR M R QVPQR#           S       R  R H TG  I K  N  R   #    S  K 
Conservation:  4522352443433524755744945635514744712825943903942913831832934911816914962921912938944813928932944912
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            GPPGADGIAGAAGPPGIQGSPGKEGPPGPQGPSGLPGIPGEEGKEGRDGKPGPPGEPGKAGEPGLPGPEGARGPPGFKGHTGDSGAPGPRGESGAMGLPG 1300
gnomAD_SAV:    RL  TGATV  S L   #    #  SS     P  H     Q  K T   LS   VLV G K     TV  QDRS    R  NT V#SLQ G STV  R 
Conservation:  9249349139328357138117759428438758488427117328658458227538618438338339258468988438618259268729118228
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            QEGLPGKDGDTGPTGPQGPQGPRGPPGKNGSPGSPGEPGPSGTPGQKGSKGENGSPGLPGFLGPRGPPGEPGEKGVPGKEGVPGKPGEPGFKGERGDPGI 1400
gnomAD_SAV:      #    E N   P L  L  A  LL N   L F  #T      SP    WDH  SR      AC  L D          E A    KH   R S   E 
Conservation:  4392385681184183592182781284382593393381281381381485173594886186484282385182295461375273170374483382
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDD D BBD          DD     D DDDDDDDDDDDDDDDDDD BBBBBBB    DDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            KGDKGPPGGKGQPGDPGIPGHKGHTGLMGPQGLPGENGPVGPPGPPGQPGFPGLRGESPSMETLRRLIQEELGKQLETRLAYLLAQMPPAYMKSSQGRPG 1500
gnomAD_SAV:     D      R      A    R   RS #DL        AA  R S  HQR    M Q#  # NPCQ   K   E F I FSCH  RVHL#CT   E S E
Conservation:  7978911943916945927756854535742644662823734624726633727544353623444444651235412314234323432342217476
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                    H                                   
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD   
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            PPGPPGKDGLPGRAGPMGEPGRPGQGGLEGPSGPIGPKGERGAKGDPGAPGVGLRGEMGPPGIPGQPGEPGYAKDGLPGIPGPQGETGPAGHPGLPGPPG 1600
gnomAD_SAV:    #  HS       #  RIWKT#S    C K  F   D    G   SGLDG V   Q G  SL  S  H KS    #   W L  R V ES     FL  LS
Conservation:  4852284461354264264453662182683489397687692597392396938841932732934928966568366225257437134115328437
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:   DBBBB     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD     
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20      
AA:            PPGQCDPSQCAYFASLAARPGNVKGP 1626
gnomAD_SAV:        # L P DH TR P WL K   T
Conservation:  22834432362422234144252431
SS_PSIPRED:                              
SS_SPIDER3:                              
SS_PSSPRED:                              
DO_DISOPRED3:   D  D  D  DDD DD DD DDDDDB
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDD