Q8TAB3  PCD19_HUMAN

Gene name: PCDH19   Description: Protocadherin-19

Length: 1148    GTS: 7.937e-07   GTS percentile: 0.137     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 78      BenignSAV: 20      gnomAD_SAV: 340      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MESLLLPVLLLLAILWTQAAALINLKYSVEEEQRAGTVIANVAKDAREAGFALDPRQASAFRVVSNSAPHLVDINPSSGLLVTKQKIDRDLLCRQSPKCI 100
PathogenicSAV:                         P     V           V                            G        R        H        S 
gnomAD_SAV:                       T     M  L           DL            AG S V     S     A  SS   Q II       M      R F
Conservation:  2224101001112222211133124223314522333355343364212322101112325565557553644342168452445668872484234692
STMI:          SSSSSSSSSSSSSSSSSSSSS                                                                               
SS_PSIPRED:     HHHHHHHHHHHHHHHHHHHHHHH     HHHH    EEEEHHHHHHH            EEEE       EEE     EEEE     HHHHH     EE
SS_SPIDER3:          HHHHHHHHHHHHHHHH   EEE  HH     EE EHHHHHHH            EEEE      EEEE     EEEE  E  HHHH       E
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHHHHHHH     HHH     EEEHHHHHHHHH           EEEE       EEE     EEEE     HHHHH     EE
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDD                                                                                 
DO_SPOTD:      DDDDDDDDDDDDDDDD                                                                                    
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            ISLEVMSSSMEICVIKVEIKDLNDNAPSFPAAQIELEISEAASPGTRIPLDSAYDPDSGSFGVQTYELTPNELFGLEIKTRGDGSRFAELVVEKSLDRET 200
PathogenicSAV:                     # KYS                P   R      T                                    RL      #Q 
gnomAD_SAV:    V      N     L             G     MQ                  H     NS         SD       A A SC VT  #      H M
Conservation:  6579576654786675676285998591964335546959693668649833939694515656482555254848759398897657996677299892
SS_PSIPRED:    EEEEEE    EEEEEEEEEE          HHHEEEEEE                        EEEE      EEEEEE      EEEEEEEE       
SS_SPIDER3:    EEEEEE    EEEEEEEEEEE           EEEEEEEEE     EEE              EEEE      EEEEEEE     EEEEEEEE E     
SS_PSSPRED:    EEEEEE    EEEEEEEEEEE            EEEEEE                        EEEEE      EEEE        EHHHEE        
DO_DISOPRED3:                                                         DDD                              D           
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                 DDDDDD D      DD                                      

                       10        20        30        40        50        60        70        80        90     
AA:            QSHYSFRITALDGGDPPRLGTVGLSIKVTDSNDNNPVFSESTYAVSVPENSPPNTPVIRLNASDPDEGTNGQVVYSFYGYVNDRTRELFQIDPHSGLVTV 300
PathogenicSAV: P P  #     H                   # S #            D          R D H          CP                   V    
gnomAD_SAV:      YC CGM        QH  SF      I          Q            H I L    S       S     A  R    LR    H    RS  II
Conservation:  5456362458288846532643364668496999583942436364639745153264466879399839867496634543544345926442594535
SS_PSIPRED:      EEEEEEEEE        EEEEEEEEEE            EEEEE         EEEE           EEEEEEE     HHHHHH        EEEE
SS_SPIDER3:      EEEEEEEEEE     EE EEEEEEEEEE           EEEEEE        EEEEEE         EEEEEEE     HHHHHH EE     EEEE
SS_PSSPRED:     HHHHHHEEEE         EEEEEEEEEE           EEEEEEE       EEEEEE          EEEEEE     HHHHHH        EEEE
DO_DISOPRED3:                                   DDDDD D                                                            
DO_SPOTD:                                                                                                          
DO_IUPRED2A:         DDD           DDDDDDD          DDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                  
CARBOHYD:                                                                  N                                       

                       10        20        30        40        50        60        70        80        90     
AA:            TGALDYEEGHVYELDVQAKDLGPNSIPAHCKVTVSVLDTNDNPPVINLLSVNSELVEVSESAPPGYVIALVRVSDRDSGLNGRVQCRLLGNVPFRLQEYE 400
PathogenicSAV:                    V                   #E  #                           W  N #       E               
gnomAD_SAV:           K  L                V   L          Q   T   D   F G                  C    H     GF  S S       
Conservation:  1515658221236586864859996695989638262638692927366644572246994743558989988593849288643846494589485756
SS_PSIPRED:              EEEEEEEEE         EEEEEEEEE       EEEEEE     EE         EEEEEEEE        EEEEEE     EEE EE 
SS_SPIDER3:     E        EEEEEEEEEE       EEEEEEEEEEE      EEEEEE     EEE        EEEEEEEE     H   EEEEE       EEEE 
SS_PSSPRED:    EEE       EEEEEEEEE         EEEEEEEEEE       EEEEE               EEEEEEEEEE        EEEE         EEE 
DO_DISOPRED3:                                            DDD DD DDD                                                
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                 D D               DD                                                                  

                       10        20        30        40        50        60        70        80        90     
AA:            SFSTILVDGRLDREQHDQYNLTIQARDGGVPMLQSAKSFTVLITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPDLGLNGSVSYQIVPSQVRDM 500
PathogenicSAV:    I         Q                  P       E   E HY  S      H                    N G        #        Y 
BenignSAV:                                    V                                                                    
gnomAD_SAV:       A    A      R   T I        AV H   Y IL  A     Y RY#      TM DK  L  H P  C # #  S    I    M#    E 
Conservation:  6769657563999923837869638494816494356972867396998384936229234636884985486584929694929978483734637344
SS_PSIPRED:      EEE            EEEEEEEEEE       EEEEEEEEEE            EEEEEEE       EEEEEEEE        EEEEEE       E
SS_SPIDER3:     EEEEEE     H    EEEEEEEEEE  E    EEEEEEEEEEE           EEEEEE        EEEEEEE       EEEEEEEEEE EE  E
SS_PSSPRED:      EEEE             EEEEEEE          EEEEEEEEEEE          EEEEEEE      EEEEEEE         EEEEEE        
DO_DISOPRED3:                                                 DDD                                                  
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                   DDD DD                                                                              
CARBOHYD:                         N                                                                N               

                       10        20        30        40        50        60        70        80        90     
AA:            PVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGLPSLQSNATVRVIILDVNDNTPVITAPPLINGTAEVYIPRNSGIGYLVTVVKAEDYDEGEN 600
PathogenicSAV:             R                             P             KH  #     L                                 
BenignSAV:                                          S F           M                                                
gnomAD_SAV:               L    TV        N          S F       A QIM F   N   I  T R   #  DI V  K AMAC               
Conservation:  5736684645348468649686693773979473969392945565448773748798949474392859765562686545395365466929293877
SS_PSIPRED:    E EEEEEE      EEE      HH EEEEEEEEEEE        EEEEEEEEE       EE          EEEEE       EEEEEEEEE    HH
SS_SPIDER3:    E EEEEEEE     EEEEE      EEEEEEEEEEEE         EEEEEEEE       EEE        EEEEEE       EEEEEEEE      E
SS_PSSPRED:       EEEEE     EEEE     HHHHHHHEEEEEEEE         EEEEEEEE                 EEEEEEE      EEEEEEEEEE      
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                      D
CARBOHYD:                                                   N                       N                              

                       10        20        30        40        50        60        70        80        90     
AA:            GRVTYDMTEGDRGFFEIDQVNGEVRTTRTFGESSKSSYELIVVAHDHGKTSLSASALVLIYLSPALDAQESMGSVNLSLIFIIALGSIAGILFVTMIFVA 700
PathogenicSAV:                  N      G              R #   E       P                                              
BenignSAV:                                                                               G                         
gnomAD_SAV:              HC C      S  I IS#  W N RA  A  M  Y         F         T H    VR G      M                  
Conservation:  9665834335432594463238664423233522243366574529695558553845453222112223326147489768669547736975595577
STMI:                                                                                        MMMMMMMMMMMMMMMMMMMMM 
SS_PSIPRED:    HEEEEEE        EE     EEEE EE       EEEEEEEEEE      EEEEEEEEEEE             HHHHHHHHHHHHHHHHHHHHHHHH
SS_SPIDER3:    EEEEEEEE     EEEE      EEEEE        EEEEEEEEEE  E   EEEEEEEEEEE              HHHHHHHHHHHHHHHHHHHHHHH
SS_PSSPRED:       EEE         EEE    EEE            EEEEEEEEE     HHHHHHHHHHHH             EEHHHHHHHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                      D DD               DDDDDD       
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   DDD                                                                                                 
CARBOHYD:                                                                                 N                        

                       10        20        30        40        50        60        70        80        90     
AA:            IKCKRDNKEIRTYNCSNCLTITCLLGCFIKGQNSKCLHCISVSPISEEQDKKTEEKVSLRGKRIAEYSYGHQKKSSKKKKISKNDIRLVPRDVEETDKMN 800
gnomAD_SAV:       R ED         S    I I S    R         W T      ER#  A        VD  PC  KN   N         C    E A  E   
Conservation:  6777556973559672222222222222222222222222222222222222222222222255667225353343976676977979977659826597
SS_PSIPRED:    HHHH               EEEE            EEEEEE     HHH             HHHHH               HHHEEE           E
SS_SPIDER3:    HH                EEEE              EEEE                       EEE                                  
SS_PSSPRED:    HHH                                                              HHH                                
DO_DISOPRED3:              DD      D     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:            DDDDDDDDDDDDD         DDDDDDDDD     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                     DDDD D                       DDD                  

                       10        20        30        40        50        60        70        80        90     
AA:            VVSCSSLTSSLNYFDYHQQTLPLGCRRSESTFLNVENQNTRNTSANHIYHHSFNSQGPQQPDLIINGVPLPETENYSFDSNYVNSRAHLIKSSSTFKDLE 900
BenignSAV:                                                                   R                                     
gnomAD_SAV:    I    F #           M     HL      DA DES H  N     RY   N# S E     SSG V          H M  G   V   Y S    
Conservation:  9996779467746977725599754675646656634652332324524663834633434723246576564445426456244855645434445546
SS_PSIPRED:    EEE           EEEE                               EE                                  HHHHHH    HHH  
SS_SPIDER3:    EEE            EEEE           EE                EEEE                                 HHHHH          
SS_PSSPRED:                                                                                         HHHHHH         
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                  DDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDDDD    DDDD                    D

                       10        20        30        40        50        60        70        80        90     
AA:            GNSLKDSGHEESDQTDSEHDVQRSLYCDTAVNDVLNTSVTSMGSQMPDHDQNEGFHCREECRILGHSDRCWMPRNPMPIRSKSPEHVRNIIALSIEATAA 1000
BenignSAV:                                                              Q                     #                    
gnomAD_SAV:            R  N          QG        G    #    E  T         N Q   W H    MY   #   R HFEP     H  T     PS 
Conservation:  4358466966688568975855645224433343632322312251243221333452455446566565548312122342424323434342343122
SS_PSIPRED:                       HHHHHH   HHHHHHHH                                                 HHH EE         
SS_SPIDER3:                       HH   H HHHHHHHH   E                       EE      EE              HHE EEE        
SS_PSSPRED:                                                                                        HHHH EEE        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDD                 DDDDDDDDDBBBBBBB          D      D      D            DDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD     DDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDD            DDDDDDDDDDDDDDDDD   D                DDDDDDDDDDDDD D  D         

                       10        20        30        40        50        60        70        80        90     
AA:            DVEAYDDCGPTKRTFATFGKDVSDHPAEERPTLKGKRTVDVTICSPKVNSVIREAGNGCEAISPVTSPLHLKSSLPTKPSVSYTIALAPPARDLEQYVNN 1100
BenignSAV:                 W                                                                 #              V      
gnomAD_SAV:      # C N    R  SE       N LT D  I       N  F R     ITW       #  L   R#    C S  A # C  V TT  G VK    S
Conservation:  2341343422245463447742131220342113333111221335433322222142132122224313224212221122221122212221411332
SS_PSIPRED:                                                     HHHH                HH              EE      HHHHH  
SS_SPIDER3:                                                     HHHH      E        HH                       HHHHH  
SS_PSSPRED:                                                       HHH                                       HHHHH  
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:      D           DDDDDDDDDDDDDDDDDDDDDDDDD                      DD DD DDDDDD D   D DD DD       DDDDDDD

                       10        20        30        40        
AA:            VNNGPTRPSEAEPRGADSEKVMHEVSPILKEGRNKESPGVKRLKDIVL 1148
BenignSAV:       S   #          N               H   SS         
gnomAD_SAV:    I S A G      G   I  G           CH   AS  P  GTI 
Conservation:  122222222122231321424325532443622241422222332222
SS_PSIPRED:                     HHHHHHHHHHHHHHH          HHHH  
SS_SPIDER3:                     HHHHHHHHHHHH H        HH       
SS_PSSPRED:                     HHHHHHHHHHHHHH      HHHHHHHHHH 
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDDB  D
DO_SPOTD:      DDDDDDDDDDDDDDDDD               DDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDD