Q8TDX6  CGAT1_HUMAN

Gene name: CSGALNACT1   Description: Chondroitin sulfate N-acetylgalactosaminyltransferase 1

Length: 532    GTS: 2.941e-06   GTS percentile: 0.894     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 2      BenignSAV: 4      gnomAD_SAV: 436      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MMMVRRGLLAWISRVVVLLVLLCCAISVLYMLACTPKGDEEQLALPRANSPTGKEGYQAVLQEWEEQHRNYVSSLKRQIAQLKEELQERSEQLRNGQYQA 100
gnomAD_SAV:    ##LI#W      F#LAI  MFVSSGVCL C WS N   EK *VVVS GDG M  V#SH IF#  K #Y# *M #Q QR TKFR K * TT P   AR ET
Conservation:  2231264221211421232323322334372428241110002222410222322143446442763531331793577459624842532244022110
STMI:                        MMMMMMMMMMMMMMMMMMMMM                                                                 
SS_PSIPRED:       HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SS_SPIDER3:        HHHHHHHHHHHHHHHHHHH HHHHHHHHH       H              HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SS_PSSPRED:       HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DO_DISOPRED3:  BBDDDDDDDDDDDDDDDDDDDDDDDDDD                 D                                                  DDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD      DD  DD DD  DDD D  DDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                            DDDDDDDD         DD                              DDDDD D   

                       10        20        30        40        50        60        70        80        90     
AA:            SDAAGLGLDRSPPEKTQADLLAFLHSQVDKAEVNAGVKLATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDELVEAIESALETLNSPAENSPN 200
BenignSAV:          P                              I                                                       N       
gnomAD_SAV:     H#T PR  MCASQ    VH D  YL ##E  MK#DIN DI CTSLR V    *R  #V# D I#LRK# AA TV W D## VV       SG#SQS AS
Conservation:  0011112000100211213622674384136751082334586433666465323666865874679564549696757522456165226714111000
SS_PSIPRED:    HH              HHHHHHHHHH   HHHH        HHH    EE     EEE               HHHHHHHHHHHHHHHHHH         
SS_SPIDER3:    HH              HHHHHHHHH    HHHH        HHH    EEE H H EE     E         HHHHHHHHHHHHHHHHHHH        
SS_PSSPRED:    HH            HHHHHHHHHHHH               HHH           EEE              HHHHHHHHHHHHHHHHHHH         
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDD                                                                             
DO_SPOTD:      DDDDDDDDDDDDDD                                                                                      
DO_IUPRED2A:     DDDDDDDDDD    D DDDD                                       DDDDDDDDDDDDDDDD           DDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            HRPYTASDFIEGIYRTERDKGTLYELTFKGDHKHEFKRLILFRPFGPIMKVKNEKLNMANTLINVIVPLAKRVDKFRQFMQNFREMCIEQDGRVHLTVVY 300
gnomAD_SAV:     CR RTAY # RVCQI  E  IWC FSLER  NRKLTWFS  Q LS VV    GE S V#MVFH TM V   LE VQEL RTY KK NDL#E L   #A 
Conservation:  2124212252485386964697397827332000143442788998855473230343112269576996273438159515882443113324557887
SS_PSIPRED:         HHHEEEEEEEE     EEEEEEEE     EEEEEEEE           HHH     EEEEEEEE   HHHHHHHHHHHHHHHH     EEEEEEE
SS_SPIDER3:       E HHHEEEEEEEE     EEEEEEEE      EEEEEEE       E           EEEEEEEE   HHHHHHHHHHHHHH H     EEEEEEE
SS_PSSPRED:         HHH   EEEEE      EEEEEE         EEEEE                   EEEEEEE   HHHHHHHHHHHHHHHHHH    EEEEEEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   DDD                                                                                                 

                       10        20        30        40        50        60        70        80        90     
AA:            FGKEEINEVKGILENTSKAANFRNFTFIQLNGEFSRGKGLDVGARFWKGSNVLLFFCDVDIYFTSEFLNTCRLNTQPGKKVFYPVLFSQYNPGIIYGHHD 400
PathogenicSAV:                                                                                    R                
gnomAD_SAV:      EQ   GD AMFG#S  V  L      E   QVPW  #V I#SH  R   I F      MF     RSM        E  L SAV IR  SSVTH#QQE
Conservation:  8913341474136313342126256745352539679588547552822266759999897386246825954452575565565665567724663212
SS_PSIPRED:    E    HHHHHHHHHHHHHH     EEEEE      HHHHHHHHHHHH    EEEEEEE      HHHHHHHHHH     EEEEEEEE             
SS_SPIDER3:         HHHHHHHHHHHH      EEEEEE      HHHHHHHHHH      EEEEEEE      HHHHHHHHH  E   EEEEEEEE             
SS_PSSPRED:    E    HHHHHHHHHHHHHHH    EEEEE       HH HHHHHHH     EEEEEE   EE  HHHHHHHHHH     EEEEE   E            
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
METAL:                                                                    D                                        
CARBOHYD:                    N        N                                                                            

                       10        20        30        40        50        60        70        80        90     
AA:            AVPPLEQQLVIKKETGFWRDFGFGMTCQYRSDFINIGGFDLDIKGWGGEDVHLYRKYLHSNLIVVRTPVRGLFHLWHEKRCMDELTPEQYKMCMQSKAMN 500
PathogenicSAV:                                Y                                                                    
BenignSAV:                                                                             Y                           
gnomAD_SAV:    SI L  #  F#* V   #KV     M H Q  S DTDE   HS A*SAQY Y FHECH   VTM QMTMQRVY   R  HYK#Q I K  N  VH R TH
Conservation:  0173322555324435577565675585435644345476224656648965886756563248384534375667745072427234455494755656
SS_PSIPRED:        HHH  EE      EEE    EEEEEHHHHHHH             HHHHHHHHHH   EEEE      EEEEE         HHHHHHHHHHHHHH
SS_SPIDER3:         H     E     E E    EEEEEHHHHHH H   H         HHHHHHHH    EEEEE    EEEEEEE        HHHHHHHHHHHH  
SS_PSSPRED:        HHHHH               EEEEEHHHHHH               HHHHHHHHHH  EEEEE    EEEEEE         HHHHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
METAL:                                                                                     H                       

                       10        20        30  
AA:            EASHGQLGMLVFRHEIEAHLRKQKQKTSSKKT 532
gnomAD_SAV:    K  QVH DR  I Y#MDVRIC#  L I G   
Conservation:  66654447354531443072233201201111
SS_PSIPRED:    H  HHHHHHHHHHHHHHHHHHHHHH       
SS_SPIDER3:       HHHHHHHHH  HHHH HHHHHH       
SS_PSSPRED:    HH HHHHHHHHHHHHHHHHHHHHHH       
DO_DISOPRED3:                   DDDDDDDDDDDDDDD
DO_SPOTD:                         DDDDDDDDDDDDD
DO_IUPRED2A:                        DDDDDDDDDDD