Q8TE12  LMX1A_HUMAN

Gene name: LMX1A   Description: LIM homeobox transcription factor 1-alpha

Length: 382    GTS: 1.232e-06   GTS percentile: 0.324     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 2            gnomAD_SAV: 175      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MLDGLKMEENFQSAIDTSASFSSLLGRAVSPKSVCEGCQRVILDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYEKLFAVKCGGCFEA 100
PathogenicSAV:                                                                                                 S   
gnomAD_SAV:     RNS     S  RVM   V C  V D # ISRPA KS  Q   E    Q  N  R  K LH VF  GS D       R    N   Q    A   S  QG
Conservation:  1100011111001111112011111100010112221201231112221211111210210121100120023102101121101001662327146142
SS_PSIPRED:          HHH            HHH                    EEEEEE   EE     EE           EEE  EEEE  HHHHHH          
SS_SPIDER3:           H H          H H          EE     EE   EEEEE      HHHEEEEE       E EEE  EEEEE  HHHHEE E       
SS_PSSPRED:           HHHH                                HHHHHHHH    HHHHHHHH                   HHHHHHHH H        
DO_DISOPRED3:  BBBBBDDDDDDDDDDDDDDDDDDDDDDDDD                                                                      
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                      
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            IAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGTAEEGKDHKRPKRPRT 200
gnomAD_SAV:     TLH    W# TN    R   Y L KQ  HR  A    KR        AN #      NS            G     RRT    #    N RG  #L  
Conservation:  6233536434221454427836348223734973566445475731472252253112421142334433331101011111312122126245699888
SS_PSIPRED:      HHHEEEE    EEEE   EEEE         EEEEE  EEEE   HHHHHHHHH              HHHHH                         
SS_SPIDER3:      HHHEEEEE  EEEEEEEEEEEEE        EEEEE  EEEEE    HH H                 H                             
SS_PSSPRED:       HHHHHHH   EEEEE   EE         EEEEEE   EE     HHHHHH                                              
DO_DISOPRED3:                                                           DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                        DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                       DD  DDD  DDDDDDDDDDDDDDDDDDDDDDD
DNA_BIND:                                                                                                    PKRPRT

                       10        20        30        40        50        60        70        80        90     
AA:            ILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRQQQQQQDQQNTQRLSSAQTNGGGSAGMEGIMNPYTALPTPQQLL 300
PathogenicSAV:                                         L                                                           
gnomAD_SAV:           Q   V  G    S         T      H I        V V    S E R    R  S      R #S    EI   IKS MT LPTE  M
Conservation:  9865276945555454535356755524433245334555366454344542333574333233522222311111111321242421332232224244
SS_PSIPRED:       HHHHHHHHHHH       HHHHHHHHHHH     HHHHH   HHHHHHHHHHHHHHHHHHH                               HHHH 
SS_SPIDER3:       HHHHHHHHHHH       HHHHHHHHHHH    EEEHEE     HHHHHHHHHHHHHH  H    H                           HHH 
SS_PSSPRED:       HHHHHHHHHHH       HHHHHHHHHH     EEEEEE   HHHHHHHHHHHHHHHHHHH                                HHHH
DO_DISOPRED3:                                                   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDD  DD   DDDDDDDDDDDDDDDDDDDDDD      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDD                                           DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  D      
DNA_BIND:      ILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLA                                              

                       10        20        30        40        50        60        70        80  
AA:            AIEQSVYSSDPFRQGLTPPQMPGDHMHPYGAEPLFHDLDSDDTSLSNLGDCFLATSEAGPLQSRVGNPIDHLYSMQNSYFTS 382
gnomAD_SAV:     VKP I   EA * C   R K  E V  H  K H YNVNNHNA  GK V S   N  V #   KME  T R  F KDF   C
Conservation:  2443212213243435458454556455330223213252132232123344222241312213144445385656355322
SS_PSIPRED:                                                                                      
SS_SPIDER3:                                                                           H E        
SS_PSSPRED:                                                                                      
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD     D    D
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD           DDDDDDD
DO_IUPRED2A:   D  D     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD    DD DDDD    DDDDDDDDDDDDD