Q8TER0  SNED1_HUMAN

Gene name: SNED1   Description: Sushi, nidogen and EGF-like domain-containing protein 1

Length: 1413    GTS: 2.045e-06   GTS percentile: 0.670     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 4      gnomAD_SAV: 618      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MRHGVAWALLVAAALGLGARGVRGAVALADFYPFGAERGDAVTPKQDDGGSGLRPLSVPFPFFGAEHSGLYVNNNGIISFLKEVSQFTPVAFPIAKDRCV 100
gnomAD_SAV:     W                                                         L              K      R    L     LVG  #RL
Conservation:  2222222220200000002222222220000011200021100001113111110110114010222221086678356766677554745685436445
STMI:          SSSSSSSSSSSSSSSSSSSSSSSS                                                                            
SS_PSIPRED:      HHHHHHHHHHHHH  HH     EEEHHH                       EE              EEE    EEEE EEEE              E
SS_SPIDER3:       HHHHHHHHHHH          EEEHHH     HH                EE            E EEE     EEEEEE E E           EE
SS_PSSPRED:       HHHHHHHHHHHHH                                                     EEEE  HHHHHHHHHH             EE
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDD                     DDDDD DDDD                                                
DO_SPOTD:      DD                                                                                                  
DO_IUPRED2A:                                            DD DDD D                                                   

                       10        20        30        40        50        60        70        80        90     
AA:            VAAFWADVDNRRAGDVYYREATDPAMLRRATEDVRHYFPELLDFNATWVFVATWYRVTFFGGSSSSPVNTFQTVLITDGKLSFTIFNYESIVWTTGTHAS 200
gnomAD_SAV:           A  QHG N   W  IN  TPHQ MKNI      RV  S # I  G   Q SS    F A  S #   F   S  YSSF      M      TT
Conservation:  6868999999846916468842421351454164125744332826394574893499879953166676773675775137997769336377794766
SS_PSIPRED:    EEEEEE         EEEE    HHHHHHHHHHHHHH        EEEEEEE   EEEEE          EEEEE      EEEE               
SS_SPIDER3:    EEEEEE     EEEEEEEE    HHHHHHHHHHHHHH         EEEEEEEEEEEEE          EEEEEEE   E  E E    E       E  
SS_PSSPRED:    EEEEE          EEE     HHHHHHHHHHHHHH H       EEEEEEEEEEEE            EEEE            EE            
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                  N                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            SGGNATGLGGIAAQAGFNAGDGQRYFSIPGSRTADMAEVETTTNVGVPGRWAFRIDDAQVRVGGCGHTTSVCLALRPCLNGGKCIDDCVTGNPSYTCSCL 300
gnomAD_SAV:     R STI R  V   V  S  N  H     S C   # KA  I  MS   H V   N T  HM D S   Y#  V H  R SS   N YL#   P S F F
Conservation:  7975117767797969777888185646855671545245258569258597886734454494634447352274864556264368648394446584
SS_PSIPRED:                                                       EEEE                           EEE         EEEE  
SS_SPIDER3:              E     EE             E          EE        EEE     E                     E E         EEEE  
SS_PSSPRED:                                                      EEEEE                           EE          EEEE  
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                        DDD                                                            
DISULFID:                                                                             C     C     C            C C 

                       10        20        30        40        50        60        70        80        90     
AA:            SGFTGRRCHLDVNECASQPCQNGGTCTHGINSFRCQCPAGFGGPTCETAQSPCDTKECQHGGQCQVENGSAVCVCQAGYTGAACEMDVDDCSPDPCLNGG 400
gnomAD_SAV:    W    QK    M #    SY    S   A  R C   L   EASN    L S  #E     V      SFV    P R  R G   N E      G   R
Conservation:  4864932853434552525527383713123242616225415108321143511118043526111011236142273270143243439272984667
SS_PSIPRED:                            EEE     EEEE                          EEEE    EEEE    EE                    
SS_SPIDER3:       E                    EEEE   EEEEE            E             EEEE   EEEEE        H                 
SS_PSSPRED:                            EE      EEEE                          EEE     EEEE                          
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:             C      C    C     C        C C        C      C    C     C        C C        C      C    C    

                       10        20        30        40        50        60        70        80        90     
AA:            SCVDLVGNYTCLCAEPFKGLRCETGDHPVPDACLSAPCHNGGTCVDADQGYVCECPEGFMGLDCRERVPDDCECRNGGRCLGANTTLCQCPLGFFGLLCE 500
gnomAD_SAV:          EY    Y K     H    V    ET FL # L RSI  #E        SKD          RN    # RS  RDT N F LSR  Y  F   
Conservation:  2833132475929313729129747102032390312633231831221152949127529128133221181846762824242326275354481365
SS_PSIPRED:    EEEE    EEEE    EE                        EEE     EEEE                        EEE     EEE           
SS_SPIDER3:    EEE    EEEEE    E                         EEE    EEEEE    EE                  EE     EEEE    EE     
SS_PSSPRED:    EEE     EEE                                E       EEE                        EE      EEE           
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:       C        C C        C          C    C     C        C C        C       C C     C       C C        C 
CARBOHYD:             N                                                                                            

                       10        20        30        40        50        60        70        80        90     
AA:            FEITAMPCNMNTQCPDGGYCMEHGGSYLCVCHTDHNASHSLPSPCDSDPCFNGGSCDAHDDSYTCECPRGFHGKHCEKARPHLCSSGPCRNGGTCKEAGG 600
gnomAD_SAV:          H  ID R    VC V        IY SN   G     S  PE   TR   N R  #H  KRLH  Q       W  V          M     S
Conservation:  5555225853432795642958748344845332112553137477737836982922344474838234406228634442253336855684634213
SS_PSIPRED:                      EEE     EEEE                        EEE     EEEE                                  
SS_SPIDER3:    EE                EEEE   EEEEE                        EEE     EEEE                           EEEE   
SS_PSSPRED:    EE                 EE     EEEE                        EEE      EE                             E     
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:                                                  C    C     C        C C        C       C    C     C     

                       10        20        30        40        50        60        70        80        90     
AA:            EYHCSCPYRFTGRHCEIGKPDSCASGPCHNGGTCFHYIGKYKCDCPPGFSGRHCEIAPSPCFRSPCVNGGTCEDRDTDFFCHCQAGYMGRRCQAEVDCGP 700
gnomAD_SAV:    K R     H        R    FT      SSI     V      S S   Q   MV PL V#GQ     S K Q M    R R R T CW     AGST
Conservation:  2425245335385485563657645496357776977697678664124285485212455122392897593444147392932973944852213761
SS_PSIPRED:     EEEE                           EEE     EEEE    EE                    EEE     EEEE    EE            
SS_SPIDER3:    EEEEE          E                EEEE    EEEE     E    E               EEEE   EEEEE     E      EEE   
SS_PSSPRED:     EEEE                           EE      EEE                            EE      EEE                  
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:         C C        C       C    C     C        C C        C      C    C     C        C C        C     C  

                       10        20        30        40        50        60        70        80        90     
AA:            PEEVKHATLRFNGTRLGAVALYACDRGYSLSAPSRIRVCQPHGVWSEPPQCLEIDECRSQPCLHGGSCQDRVAGYLCLCSTGYEGAHCELERDECRAHPC 800
gnomAD_SAV:    L GMRYV  L  DMQ  # VR    #  G RS  L Q Y LYS    T E  G    L    V   T   #              T  K   E  Q    
Conservation:  6114344241334522753516062296231222113472128165155260345541538935482744134153716109409028524143922177
SS_PSIPRED:                 EE                     EE                            EEE     EEEE                      
SS_SPIDER3:             E   EE      E       E      EEE E    E                    EEEE   EEEEE                      
SS_PSSPRED:                 E       E               EE                           EEE     EEEE                      
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:                             C              C           C     C    C     C        C C        C      C    C

                       10        20        30        40        50        60        70        80        90     
AA:            RNGGSCRNLPGAYVCRCPAGFVGVHCETEVDACDSSPCQHGGRCESGGGAYLCVCPESFFGYHCETVSDPCFSSPCGGRGYCLASNGSHSCTCKVGYTGE 900
gnomAD_SAV:         Y  F  DH  Q     F       M T NC    RA Q G SSR S  I      # R*K      S N    H    T            C  K
Conservation:  3445362224634171731552802842633171336734651632323233648456638235533254633175536928311343335494354683
SS_PSIPRED:        EEE     EEEE                          EEE     EEEE                          EEE     EEEE        
SS_SPIDER3:        EEEE   EEEEE            E             EEEE    EEEE     E    E               EEE      EEE        
SS_PSSPRED:         E      EEEEE                         EEE     EEE                          EEE                  
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:           C        C C        C      C    C     C        C C        C      C    C     C        C C       

                       10        20        30        40        50        60        70        80        90     
AA:            DCAKELFPPTALKMERVEESGVSISWNPPNGPAARQMLDGYAVTYVSSDGSYRRTDFVDRTRSSHQLQALAAGRAYNISVFSVKRNSNNKNDISRPAVLL 1000
gnomAD_SAV:          S SMT   DSL G R  T   L S#  T  T    V  CI  NSF C#    NGPL L    T E SG#    I    #K  K        M  
Conservation:  3824563993492633787345364914522124123457677563515331446845431332635538159238788557585436524838474254
SS_PSIPRED:       EEE               EEEE         EE   EEEEEE           EEEE                EEEEEE              EEEE
SS_SPIDER3:                  EE      EEEE       EEE    EEEEE       EE                      EEEE                EE E
SS_PSSPRED:                         EE         HHH     EEEE                              EEEEEEE                   
DO_DISOPRED3:                                                         DDDDDDD   D                            DDDDDD
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                        DDDDDDDD                          DDD                                   DDDDDDD
DISULFID:       C                                                                                                  
CARBOHYD:                                                                                  N                       

                       10        20        30        40        50        60        70        80        90     
AA:            ARTRPRPVEGFEVTNVTASTISVQWALHRIRHATVSGVRVSIRHPEALRDQATDVDRSVDRFTFRALLPGKRYTIQLTTLSGLRGEEHPTESLATAPTHV 1100
gnomAD_SAV:    VHM  C#L  LK SS  VG      V QK H D I E C   C S   K   IN     NK    T   E K I         T  KQ  G    VLM M
Conservation:  4686942451434264654353538353122733633654451223212222324413422348338277436242425666212132543623236322
SS_PSIPRED:               EEEE    EEEEEEEE          EEEE                                EEE                        
SS_SPIDER3:    E          EEEEE       EEEEE      E  EEE E                E      E       EEEE                     EE
SS_PSSPRED:              EEEEEEE  EEEEEEE          EEEEE       HHHH                    EEEEEE                      
DO_DISOPRED3:  DDDD                                    DDDDDDDDDDDD DD                                D   DD       
DO_SPOTD:                                                                                                          
DO_IUPRED2A:            DDD                                  D DDD D                         DDDD   DDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            WTRPLPPANLTAARVTATSAHVVWDAPTPGSLLEAYVINVTTSQSTKSRYVPNGKLASYTVRDLLPGRRYQLSVIAVQSTELGPQHSEPAHLYIITSPRD 1200
gnomAD_SAV:      W       ITTQ   ICVRM    R S       L    SN  SNNHCL SR  #  M CN  RAWG   F M M  M  RL  GK  D  VV F   
Conservation:  7879366276634254366624293132121225775596824643789568483613734759154335254535524532443272822425252222
SS_PSIPRED:    EE         EEEE     EEEE          EEEE         EEEE     EEEEEEE       EEEEEEEE            EEEEE     
SS_SPIDER3:    E          EEEE   EEEEEE      E  EEEEE E       EEE     E EEEEEE     EEEEEEEE     E        EEEEEE    
SS_PSSPRED:               EEEE   EEEEE           EEEEE          E        EEEE       EEEEEEEEE             EEEE     
DO_DISOPRED3:                                                                                           DDDDDDDDDDD
DO_SPOTD:                                                                                                          
DO_IUPRED2A:      D       D        D               D         DDDDDDD                      DDDDDDDD  DDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            GADRRWHQGGHHPRVLKNRPPPARLPELRLLNDHSAPETPTQPPRFSELVDGRGRVSARFGGSPSKAATVRSQPTASAQLENMEEAPKRVSLALQLPEHG 1300
BenignSAV:                                P                                                            Q         R 
gnomAD_SAV:     TN H   R  YAQM    LLLVH SDPC   NR# SQ S  RS  L   NR E A T LSSL  R   MG  R      Q  K   RWIT   #   RS
Conservation:  1224210121112126335224211223212122103113121464445274535445432113122321322524423443263351222575322311
SS_PSIPRED:                                                          EE           EEEE                   EEEE      
SS_SPIDER3:        E E      E                               EEE      EEE        E EEE         H    E    EEEEEE     
SS_PSSPRED:                                                         EEEE         EEEE                    EEEE      
DO_DISOPRED3:  DDDD   DDBBB  B DDDDDDDDDDDDDDDDDDDDDDDDDDD                      DDDDDDDDDDDDDDDDDDDD               
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            SKDIGNVPGNCSENPCQNGGTCVPGADAHSCDCGPGFKGRRCELACIKVSRPCTRLFSETKAFPVWEGGVCHHVYKRVYRVHQDICFKESCESTSLKKTP 1400
BenignSAV:                                                                  S                                      
gnomAD_SAV:       VR D  S  Q  R  AA  MLDT TP   *RL     H K TY   FC      PDR SLA  K  I   #  GI Q Y         K I    N 
Conservation:  1211211123920127388956201114319271255574264728253434686435764537465524544445634534244844526321111021
SS_PSIPRED:                        EEE      EEE          HHH                   HH     HHHHH  EEE   EE              
SS_SPIDER3:                        EEE     EEEE         HH H                           HHHHHHHHH                   
SS_PSSPRED:                                                                                EEEEEE                  
DO_DISOPRED3:                                                         DDDDDD                           DDDDDDDDDDDD
DO_SPOTD:                                                                                                 DDDDDDDDD
DO_IUPRED2A:     DDD DDDDD                                                                                      DD 
DISULFID:                C    C     C        C C        C                                                          

                       10   
AA:            NRKQSKSQTLEKS 1413
gnomAD_SAV:        R     G C
Conservation:  1201011122222
SS_PSIPRED:                 
SS_SPIDER3:                 
SS_PSSPRED:                 
DO_DISOPRED3:  DDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDD
DO_IUPRED2A:    DDDDDDDDDDDD