Q92889  XPF_HUMAN

Gene name: ERCC4   Description: DNA repair endonuclease XPF

Length: 916    GTS: 2.738e-06   GTS percentile: 0.858     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 15      BenignSAV: 25      gnomAD_SAV: 567      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MESGQPARRIAMAPLLEYERQLVLELLDTDGLVVCARGLGADRLLYHFLQLHCHPACLVLVLNTQPAEEEYFINQLKIEGVEHLPRRVTNEITSNSRYEV 100
BenignSAV:                                     L                                               F                   
gnomAD_SAV:    # #R ATG# SVTLRPQ   HPG V FGAE      C  CGNW FC YF    P SS        S   *H V  V LKEIGY SCC   AS  #CH # 
Conservation:  6333333333331112212111242121123211222223122443222232312111211112222116465338535441567446565514426424
SS_PSIPRED:                 HHHHHHHHHHHHHH    EEE      HHHHHHHHHHHH     EEEEE   HHHHHHHHHHHHH        EE     HHHHHHH
SS_SPIDER3:                   HHHHHHHHHHHH   EEEEE     HHHHHHHHHHHH     EEEEE   HHHHHHHHHHHHH       E E     HHHHHHH
SS_PSSPRED:          HHHHHHHHHHHHHHHHHHHHHH   EEEE     HHHHHHHHHHHH     EEEEE   HHHHHHHHHHHHHH               HHHHHH
DO_DISOPRED3:  DDDDDDDDD                                                                                           
DO_SPOTD:      DDDDDDDDD                                                                                           
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            YTQGGVIFATSRILVVDFLTDRIPSDLITGILVYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYLWPRFHVAV 200
PathogenicSAV:                                                     P                                               
BenignSAV:                                                      C                 V                                
gnomAD_SAV:     KP AGL V      I     GV  H    VSAC# P   KYYE   L H LH R IH        SG   H D   M  L   I    P  *       
Conservation:  6426754445565564456534464255574676676466676775979797997992997999797657932679467435666644765779796649
SS_PSIPRED:    HHH  EEE    HHHHHHH     HHH  EEEEE   HHHH  HHHHHHHHHHHH    EEEEEE    HH     HHHHHHHHH   EEEEEE   HHH
SS_SPIDER3:    HH   EEEE   HHHHHHH     HHH  EEEEE HHH     HHHHHHHHHHHH     EEEEE   HHHH   HHHHHHHHH    EEEE     HHH
SS_PSSPRED:    HH   EEEEE EEEHHHH      HHH EEEEEEEHHHHHHHHHHHHHHHHHHHH     EEEEE         HHHHHHHHHHH   EEEEE  HHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            NSFLEQHKPEVVEIHVSMTPTMLAIQTAILDILNACLKELKCHNPSLEVEDLSLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQ 300
PathogenicSAV:                         M    P     R                                                                
BenignSAV:                                                                       H                                 
gnomAD_SAV:          Q R I *    VA   F L  VTP F HT      YR T#     #      E LL  IML  PE  *    S   # A*   L *N  *#  H
Conservation:  2628749995968547247538356667578664896699825875986986889647433776566769994999996779697769757656739959
SS_PSIPRED:    HHHHHH    EEEEEE   HHHHHHHHHHHHHHHHHHHHHHHH          HHH     HHHHHHHHH HHHHH  HHHHHHHHHHHHHHHHHHHHHH
SS_SPIDER3:    HHH H    EEEEEEE   HHHHHHHHHHHHHHHHHHHHHHHH     H    HHH     HHHHHHHH  HHHH   HHHHHHHHHHHHHHHHHHHHH 
SS_PSSPRED:    HHHHHH    EEEEEE   HHHHHHHHHHHHHHHHHHHHHHHH                  HHHHHHHHH  HHHHH HHHHHHHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
REGION:                                        LNACLKELKCHNPSLEVEDLSL               LDPLWHQLGAKTKSLVQDLKILRTLLQYL  
MODRES_A:                                                                                              K           

                       10        20        30        40        50        60        70        80        90     
AA:            YDCVTFLNLLESLRATEKAFGQNSGWLFLDSSTSMFINARARVYHLPDAKMSKKEKISEKMEIKEGEETKKELVLESNPKWEALTEVLKEIEAENKESEA 400
BenignSAV:                                                                                   S                     
gnomAD_SAV:    CY DALHI   AP SA#    E   G   AT IL#    QG FCR   #     GELT  V  E R K #   D    S   T     N    GI  N  
Conservation:  7997997497697436693972999999976945795669499742352412250212221101211314656599267864592587398618822551
SS_PSIPRED:      HHHHHHHHHHHHHHHHHH          HHHHHHHHHHHHHH    HH     HHHHHH           EEEE   HHHHHHHHHHHHHHHHHH HH
SS_SPIDER3:     HHHHHHHHHHHHHHHHHH       H   HHHHHHHHHHHHH         HHHHHHHHHHHH       HHHH    HHHHHHHHHHHHHHHHHHHH 
SS_PSSPRED:      HHHHHHHHHHHHHHHHHH           HHHHHHHHHHHHHH        HHH HHH                    HHHHHHHHHHHHHHHHHHH 
DO_DISOPRED3:                                                   DDDDDDDDDDDDDDDDDDD                                
DO_SPOTD:                                                      DDDDDDDDDDDDDDDDDDDDDDD                             
DO_IUPRED2A:                                                           DDDDDDD     DD                        DD    

                       10        20        30        40        50        60        70        80        90     
AA:            LGGPGQVLICASDDRTCSQLRDYITLGAEAFLLRLYRKTFEKDSKAEEVWMKFRKEDSSKRIRKSHKRPKDPQNKERASTKERTLKKKKRKLTLTQMVGK 500
PathogenicSAV:                                                      W                                   Q          
BenignSAV:                   Q                                Q                       L                       H    
gnomAD_SAV:    FRD  RL N     Q *A  TVC  FVT   F  R   NVK   T#KQ      RKEN*M V I# R#S  L    W  I   A R   W  #  HVA N
Conservation:  5645946769858896959955562084515925892644343312121111022111232002111333123120012121223122322465385222
SS_PSIPRED:         EEEEEE  HHHHHHHHHHHHH HHHHHHHHHHHHH    HHHHHHHHH      HHHHHH          HH HHHHHHHHHHH    HHH    
SS_SPIDER3:         EEEEEE  HHHHHHHHHHHH  HHHHHHHH HHH    HHHHHHHHHH H  H HHHHH           HHH HHHHHHHHH     HHHH   
SS_PSSPRED:         EEEEEE  HHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHHHHHH                       HHHHHHHHHHHHH        
DO_DISOPRED3:                                                   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                            DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:      D                                              D         DDDDDDDDDDDDDDDDDDDDDDDDDD     DD  DDDDD
MOTIF:                                                                                              KKKKRK         

                       10        20        30        40        50        60        70        80        90     
AA:            PEELEEEGDVEEGYRREISSSPESCPEEIKHEEFDVNLSSDAAFGILKEPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYRASRPG 600
PathogenicSAV:  K          R               T                                     A                     W           
BenignSAV:                                        L                                       T                        
gnomAD_SAV:    S K   #E  * #CH K  GR   FLD  M K  HL   L   LRV   LVAV P   D  N#CV K#A Y M  S M  FN K   AQ##   TE KL#
Conservation:  1233121012324301210232511034101523032556734756443875569893854987696857495694776999686598899948783759
SS_PSIPRED:    HHHHH         HHH                        HH       EEEEEE       HHHHHHHHHH   EEEEE    HHHHHHHHHHH    
SS_SPIDER3:      HHH     HH H                                    EEEEEEE     HHHHHHHHHHH   EEEEE   HHHHHHHHHHHH    
SS_PSSPRED:                   HHH                      HHHH       EEEEE      HHHHHHHHHHH   EEEEEE  HHHHHHHHHHHHH   
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                      
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                         
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDD DDD D D DDD                                                                     
MODRES_P:                          S                                                                               

                       10        20        30        40        50        60        70        80        90     
AA:            KPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVPEEREGRDETNLDLVRGTASADVSTDTRKAGGQEQNGTQQSIVVDMREFRSELPSLIH 700
PathogenicSAV:        P                                                                                S           
BenignSAV:                         A                                        P                                      
gnomAD_SAV:    TR   FL V R  AD RHC    W  N   VN # V  RIIA    *D Y      A DI P Y   VAWR #S  RK I  T  A LSD #G IL VMR
Conservation:  5479999769659899958983835883887378596838678888797355744818411231222455589862311243467896799898997969
SS_PSIPRED:        EEEEEE   HHHHHHHHHHHHHHHHHHHHHHHHHH              HHHH                         EEEEE       HHHHHH
SS_SPIDER3:       EEEEEEE   HHHHHHHHHHHHHHHHHHHHHHHH                HHHH                         EEEEE      HHHHHHH
SS_PSSPRED:       EEEEEEE   HHHHHHHHHHHHHHHHHHHHHHHHHH               HHHH                       EEEEEE       HHHHHH
DO_DISOPRED3:                                       DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                      
DO_SPOTD:                                          DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                     
DO_IUPRED2A:                                           DDDDDD  DDDDDDDDDDDDD   DDDDDDDDDDDDDDDD  DD                

                       10        20        30        40        50        60        70        80        90     
AA:            RRGIDIEPVTLEVGDYILTPEMCVERKSISDLIGSLNNGRLYSQCISMSRYYKRPVLLIEFDPSKPFSLTSRGALFQEISSNDISSKLTLLTLHFPRLRI 800
PathogenicSAV:                                                                                      F            W 
BenignSAV:       D  T          T                                                  F                                
gnomAD_SAV:    GWVT T SLNS A    PI  #*  H  TN ISS    SC CR R#   C C C M  M  E GETL R  #R V   TC SG  FR  P   N R VQ 
Conservation:  6785866789959999797653979998479966974577994994593759447499898762666592444332275735854777599878986886
SS_PSIPRED:    H   EEEEEEE    EE    EEEEEE HHHHHHHH    HHHHHHHHHHH    EEEEE           HHHH     HHHHHHHHHHHHHH    EE
SS_SPIDER3:    H   EEEEEE     EEE   EEEEEE HHHHHH  H   HHHHHHHHHHH    EEEEEE            H      HHHHHHHHHHHHHH    EE
SS_PSSPRED:    HH  EEEEEEE   EEE    EEEEE  HHHHHHHHH  HHHHHHHHHHHH    EEEEE           HHHHH    HHHHHHHHHHHHHH    EE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
MODRES_P:                                                                     S                                    

                       10        20        30        40        50        60        70        80        90     
AA:            LWCPSPHATAELFEELKQSKPQPDAATALAITADSETLPESEKYNPGPQDFLLKMPGVNAKNCRSLMHHVKNIAELAALSQDELTSILGNAANAKQLYDF 900
BenignSAV:                                                     E          D            V G       K                 
gnomAD_SAV:     C  C  GAEA   Q  E RQR  VVKT  VA NYK P ALG  SL  EGVF       D  GHF VYYI SVEG G#  E KFM V R  ED R    C
Conservation:  5876786457576559943437954339366566652537444766874976576997738943364235155456324444382138663145538559
SS_PSIPRED:    EE   HHHHHHHHHHHHH      HHHH           HHH     HHHHHH      HHHHHHHHHH   HHHHH   HHHHHHHH  HHHHHHHHHH
SS_SPIDER3:    EE   HHHHHHHHHHHHHH     HHH H          H H    HHHHHHH      HHHHHHHH     HHHHH   HHHHHHHH  HHHHHHHHHH
SS_PSSPRED:    EE   HHHHHHHHHHHHHH     HHHHHH                 HHHHHHH     HHHHHHHHHHHHHHHHHHH  HHHHHHHH  HHHHHHHHHH
DO_DISOPRED3:                          DDDDDDDDDDDDDDDDDDD                                                         
DO_SPOTD:                                                                                                          
DO_IUPRED2A:               DDDDD      D  D DDDD      DDDD D D  D                                                   

                       10      
AA:            IHTSFAEVVSKGKGKK 916
BenignSAV:                #    
gnomAD_SAV:      # CV DIL E  EQ
Conservation:  5622213123124052
SS_PSIPRED:    H   HHHHH       
SS_SPIDER3:    H   HHHH        
SS_PSSPRED:    HH   HHHH       
DO_DISOPRED3:        DDDDDDDDDD
DO_SPOTD:              DDDDDDDD
DO_IUPRED2A:                  D