Q92908  GATA6_HUMAN

Gene name: GATA6   Description: Transcription factor GATA-6

Length: 595    GTS: 2.995e-07   GTS percentile: 0.010     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 16      BenignSAV: 8      gnomAD_SAV: 224      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MALTDGGWCLPKRFGAAGADASDSRAFPAREPSTPPSPISSSSSSCSRGGERGPGGASNCGTPQLDTEAAAGPPARSLLLSSYASHPFGAPHGPSAPGVA 100
PathogenicSAV:                                                                                           S         
BenignSAV:                   R     G                                              V                                
gnomAD_SAV:    I   ES RR T   R  DE S   T    Q#  R LF#T  L#  SP# RQLSA  ##  EAS PHRVSTV SQ #       #  S R SYR L   A 
Conservation:  0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
SS_PSIPRED:           EE                                                           HH                              
SS_SPIDER3:           EE    E                                                                                      
SS_PSSPRED:            E                                                                                           
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                D     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DD            DDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            GPGGNLSSWEDLLLFTDLDQAATASKLLWSSRGAKLSPFAPEQPEEMYQTLAALSSQGPAAYDGAPGGFVHSAAAAAAAAAAASSPVYVPTTRVGSMLPG 200
PathogenicSAV:                                                                             T                       
gnomAD_SAV:    RS#SS    GV     EF R SATG  P   C DR   C SG RK     FSS   PVS S      SL Q V    V   G N R  M    A  LV  
Conservation:  0000000000000000000000000000000000000000000000100010101101010001012111000200000000012111010112011010
SS_PSIPRED:           HHHHHHH         HHH                 HHHHHHHHHHHH                HHHHHHHHHHHH                 
SS_SPIDER3:            HH HHH           H  E              HHHH HHHHH                   HHHHHHHH                    
SS_PSSPRED:             HHHH                              HHHH  HHHHH                 HHHHHHHHHHHH                 
DO_DISOPRED3:  DDDDDDDDDDDDDD    DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDD                             DDDDDDDDDDDDDDDDDDDDD          D                                 DD

                       10        20        30        40        50        60        70        80        90     
AA:            LPYHLQGSGSGPANHAGGAGAHPGWPQASADSPPYGSGGGAAGGGAAGPGGAGSAAAHVSARFPYSPSPPMANGAAREPGGYAAAGSGGAGGVSGGGSSL 300
PathogenicSAV:                                   S                                                                 
BenignSAV:                                                                                        G                
gnomAD_SAV:           T                                                                                            
Conservation:  0100111000000000000001101122000001011001210010000000000000000111110220000000000000000001110000000000
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                     H                  
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:                                                                         S                                

                       10        20        30        40        50        60        70        80        90     
AA:            AAMGGREPQYSSLSAARPLNGTYHHHHHHHHHHPSPYSPYVGAPLTPAWPAGPFETPVLHSLQSRAGAPLPVPRGPSADLLEDLSESRECVNCGSIQTPL 400
gnomAD_SAV:                 L P    R         RR S A    MRTSV S  A     P  V       #      Q   S P K   Q  D     FN    
Conservation:  1101110110110100000011000000000001111110111011111001120210011111000011000000000111210133234234223213
SS_PSIPRED:                                                              HH                 HHHHH                  
SS_SPIDER3:                                                              H                    HH       EE     E    
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD   DDDDDDDDDDDDDDDDDDDDDDDD               
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD          D DD DDDDDDDDDDDDDDDDDDDDDDDD                  
ZN_FING:                                                                                                CVNCGSIQTPL

                       10        20        30        40        50        60        70        80        90     
AA:            WRRDGTGHYLCNACGLYSKMNGLSRPLIKPQKRVPSSRRLGLSCANCHTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMKKEGIQTRKRKPKNINK 500
PathogenicSAV:                                                    A   #         #T V   Q                           
gnomAD_SAV:         S R      E    #K      L      T  #Q        # I       ST                                      V  
Conservation:  4232204113211312111213122331230221232342461533414114453453234352444552312325357948545436545554641223
SS_PSIPRED:     EE     EE       HHH                                                HHHHHHH     HHH                 
SS_SPIDER3:     EE     EE      E                                       E     EE    HHHHHHH                         
SS_PSSPRED:                                         HHH                              HHHHH                         
DO_DISOPRED3:                       DDDDDDDDDDDDDDDDDDD                                             DDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDD   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                           DDDDDDDDDD                                              DDDDDDDDDDDDDDDDDDDD
ZN_FING:       WRRDGTGHYLCNAC                             CANCHTTTTTLWRRNAEGEPVCNAC                                

                       10        20        30        40        50        60        70        80        90     
AA:            SKTCSGNSNNSIPMTPTSTSSNSDDCSKNTSPTTQPTASGAGAPVMTGAGESTNPENSELKYSGQDGLYIGVSLASPAEVTSSVRPDSWCALALA 595
PathogenicSAV:           C                               G                                         L          
BenignSAV:                                                           A                   P                    
gnomAD_SAV:    L # P S S       I AF I   GR IIF I      R  TL#I    #G DA  GQ   W  G P   IN SWL V  ACMLL  C VV   
Conservation:  12210210111021321221101211111132111112210000000200011110000143011100001101221122200121121221100
SS_PSIPRED:                                                                                            HHHHHH 
SS_SPIDER3:                                                               EEE                                 
SS_PSSPRED:                                                                                            HHHHHH 
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD          
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD    DDDDDDDDDDDDDDDDDDDDDDDDD   DDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD         D DDDD  D