Q93099  HGD_HUMAN

Gene name: HGD   Description: Homogentisate 1,2-dioxygenase

Length: 445    GTS: 3.111e-06   GTS percentile: 0.917     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 77      BenignSAV: 8      gnomAD_SAV: 226      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MAELKYISGFGNECSSEDPRCPGSLPEGQNNPQVCPYNLYAEQLSGSAFTCPRSTNKRSWLYRILPSVSHKPFESIDEGQVTHNWDEVDPDPNQLRWKPF 100
PathogenicSAV: # A         K    N      P       R        AE#  L     Q      GPCS         L                  T    #   
BenignSAV:                                                    S                         V     H      A             
gnomAD_SAV:      A*   P    KR  KG H   P  A H   EI SF HC AR PELS    QN S   RP S   P   E CVYVYKSH  #K* A      R  * R 
Conservation:  8132363286865435656555569839587783466588788688548868723868986998495718366111013252216654254868668284
SS_PSIPRED:                                             HHH         HH  EEEEEEE         EE                         
SS_SPIDER3:        EEE      EE                         HHHH     E       EEEEEE          EE     EE          H       
SS_PSSPRED:                                          HHHHHH            HHHHHHHH                                    
DO_DISOPRED3:  D                                                                                                   
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                    DDDDDDDDDDD                                                   DDDDDDDDDD         D 
MODRES_A:                                                                                                       K  

                       10        20        30        40        50        60        70        80        90     
AA:            EIPKASQKKVDFVSGLHTLCGAGDIKSNNGLAIHIFLCNTSMENRCFYNSDGDFLIVPQKGNLLIYTEFGKMLVQPNEICVIQRGMRFSIDVFEETRGYI 200
PathogenicSAV:               RP   # ##             PY             AG    L  R      #L N      GS   R   G I       G   
BenignSAV:                                                                            T                            
gnomAD_SAV:    Q T #Y   E   TRPNP Y VE VN  #   V   V S CT      S      T L  R F  CAKL    IR K F I #   W RTG   *I C  
Conservation:  0542212222684187395686862543696469573792690645536798769666739154549868551438459675735236253763558996
SS_PSIPRED:                    EEEEE         EEEEEEE        EEE     EEEEEEE EEEEEE  EEEEE   EEEEE    EEEEE     EEEE
SS_SPIDER3:                E   EEEEEE        EEEEEEEE       EEE     EEEEEEE EEEEEE  EEEEE   EEEEE    EEEEEE    EEEE
SS_PSSPRED:                    EEEE           EEEEEE        EEE     EEEEEE   EEEEEE  EEE    EEEEEE  EEEEEEE      EE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            LEVYGVHFELPDLGPIGANGLANPRDFLIPIAWYEDRQVPGGYTVINKYQGKLFAAKQDVSPFNVVAWHGNYTPYKYNLKNFMVINSVAFDHADPSIFTV 300
PathogenicSAV:                TW S  D  # S  #              F            P          RR     N              E        G
gnomAD_SAV:     K C#AR   SN   # V    SHP   TST     HH L# S#    CED    #     # SA   #R   LC HKME  V  K M  E   T   AL
Conservation:  6966835656866898858688868994394967962233157356395594553536229867989979975967938239654646468849999998
SS_PSIPRED:    EEE    EE              HHH    EEEEE      EEEEEEEE  EEEEEE     EEEEEEE     EE  HHHEEEEE EEE       EEE
SS_SPIDER3:    EEE            E     E HHHH   EEHEE      EEEEEEEE  EEEEEEE     EEEEE        E HHH EEEEEEE       EEEE
SS_PSSPRED:    EEE    EE                      EEEEE      EEEEEEE   EEEEE      EEEEE      EEE          EE        EEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            LTAKSVRPGVAIADFVIFPPRWGVADKTFRPPYYHRNCMSEFMGLIRGHYEAKQGGFLPGGGSLHSTMTPHGPDADCFEKASKVKLAPERIADGTMAFMF 400
PathogenicSAV:                     P       CS      D                     L#RE     VN R LH                          
BenignSAV:           C                                   L                                E                        
gnomAD_SAV:    F     H# MT   YF    Q*RF  E  S    R  GI   L PTQ RS    D I LR#    N V# R    ER       TP SK T N IIT   
Conservation:  9976722497746999999999586349999977999699988998373968632494999369962956899912664854140618575944765888
SS_PSIPRED:    EEE      EEEEEEEEE                 HH   HHHHHHEE            EEEEE         HHHHHHHH      EEE    EEEEE
SS_SPIDER3:    EEE       EEEEEEE     E               HHHHHEEEE E E     E   EEEEE         HHHHHHHH      EEEE  EEEEEE
SS_PSSPRED:    EEE       EEE EEE                    HHHHHHHHH               EEE          HHHHHHHHH      E     EEEEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                 DD                                    
METAL:                                           H     E                             H                             

                       10        20        30        40     
AA:            ESSLSLAVTKWGLKASRCLDENYHKCWEPLKSHFTPNSRNPAEPN 445
PathogenicSAV: Q                                            
gnomAD_SAV:    Q P   TG E  F T   W D   QF *AH R    K      L 
Conservation:  874554336356422313862383288216333832323220003
SS_PSIPRED:    EE     HHHHHHHH       HHHH HHHHHH            
SS_SPIDER3:    E     EEHHHHHH      HHHHHHHHHHHHH            
SS_PSSPRED:    EE       HHHHHH       HHHHHHHHHH             
DO_DISOPRED3:                                       DDDDDDDD
DO_SPOTD:                                          DDDDDDDDD
DO_IUPRED2A:                                    DDDDDDDDDDDD