Q96P44  COLA1_HUMAN

Gene name: COL21A1   Description: Collagen alpha-1(XXI) chain

Length: 957    GTS: 1.534e-06   GTS percentile: 0.463     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 8      gnomAD_SAV: 430      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MAHYITFLCMVLVLLLQNSVLAEDGEVRSSCRTAPTDLVFILDGSYSVGPENFEIVKKWLVNITKNFDIGPKFIQVGVVQYSDYPVLEIPLGSYDSGEHL 100
gnomAD_SAV:    IDQ MI             AI  # DI A  H#SL    L  GD  R     V   E *H   IET V  L    AVM  HR  RL  M  RNH    YF
Conservation:  4100000101211201001110223423247484327965857674763116953462753657247266315465676658827386568613021126
STMI:          SSSSSSSSSSSSSSSSSSSSSS                                                                              
SS_PSIPRED:     HHHHHHHHHHHHHHH          HHHH       EEEEEE      HHHHHHHHHHHHHHHH        EEEEEEEE    EEEE       HHHH
SS_SPIDER3:      HHHHHHHHHHHHH           HHHHH      EEEEEE      HHHHHHHHHHHHHHHH  EE    EEEEEEEE    EEEE       HHHH
SS_PSSPRED:     HHHHHHHHHHHHHHH           E         EEEEEE       HHHHHHHHHHHHHH         EEEEEEEE       EE      HHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDD                                                                            
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDD                                                                           
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                                   N                                      

                       10        20        30        40        50        60        70        80        90     
AA:            TAAVESILYLGGNTKTGKAIQFALDYLFAKSSRFLTKIAVVLTDGKSQDDVKDAAQAARDSKITLFAIGVGSETEDAELRAIANKPSSTYVFYVEDYIAI 200
gnomAD_SAV:    M   K#M      K        VPYHV    T*  I # GI MH#     I GES# TG#N  I  P V  PK D TQ #TV SESLC    H       
Conservation:  2234115175786746737747414268214061346677969997999381245236623254375577727532257224572723287645478138
SS_PSIPRED:    HHHHHHHHH        HHHHHHHHHHH        EEEEEE     HHHHHHHHHHHHH   EEEEEEE     HHHHHHHH      EEEEEEEHHHH
SS_SPIDER3:    HHHHHHHH          HHHEHHHHHH        EEEEEE     HHH HHHHHHHHH   EEEEEEE     HHHHHHHH      EEEEEEEHH H
SS_PSSPRED:    HHHHHHHHH       HHHHHHHHHHHHHH      EEEEEE       HHHHHHHHHHHH  EEEEEE      HHHHHHHH      EEEEEEEE   
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            SKIREVMKQKLCEESVCPTRIPVAARDERGFDILLGLDVNKKVKKRIQLSPKKIKGYEVTSKVDLSELTSNVFPEGLPPSYVFVSTQRFKVKKIWDLWRI 300
BenignSAV:                                                                                 P                       
gnomAD_SAV:      TTD L    G D    KQF AV H #KR  VFS  EA EN    T*V   RV       EFGV Q   SI  GVP  L ILM   IL  T ML#  I 
Conservation:  2463435477685646952574523546789655125241263336415520312561532128564184258969898788776846451120478697
SS_PSIPRED:    H  HHH                          HHH     HH EEEE        EEEE       HHHHHH        EEEEEEE      EEEEEEE
SS_SPIDER3:    HHHHHHHHH                       HHH      EEEEEEE     E EEEE       H HHH         EEEEEEE      EEEEEEE
SS_PSSPRED:      HHHHHH                        HHH     HHHHHE         EEEE       HHHHH         EEEEEEEE      EEEEEE
DO_DISOPRED3:                 D                                                                                    
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            LTIDGRPQIAVTLNGVDKILLFTTTSVINGSQVVTFANPQVKTLFDEGWHQIRLLVTEQDVTLYIDDQQIENKPLHPVLGILINGQTQIGKYSGKEETVQ 400
BenignSAV:                                               M                                                         
gnomAD_SAV:    *   V         DM  V     A ITS   EFI  KR   M    A      F    GL S   NH      S     F   E   V        ALE
Conservation:  3513312837865371223529456200212824381111231687418865757733114336596114311172231565648268547112233554
SS_PSIPRED:    E     EEEEEEE     EEEEEEE     EEEEEE     EE      EEEEEEEE   EEEEE   EEE              EEEE           
SS_SPIDER3:    E     EEEEEEEE   EEEEEEEEE    EEEEEE     EE       EEEEEEE   EEEEE    EEEEE        E   EEEEE       EE
SS_PSSPRED:    E      EEEEEE    EEEEEEE      EEEEEE              EEEEEE   EEEEEE                                   
DO_DISOPRED3:                                                                                          D           
DO_SPOTD:                                                                             DDDDDDDDDDD DDD       DDDDDD 
DO_IUPRED2A:                                                                                                DD     

                       10        20        30        40        50        60        70        80        90     
AA:            FDVQKLRIYCDPEQNNRETACEIPGFNGECLNGPSDVGSTPAPCICPPGKPGLQGPKGDPGLPGNPGYPGQPGQDGKPGYQGIAGTPGVPGSPGIQGARG 500
BenignSAV:                                                                                                   T     
gnomAD_SAV:    L A*  *  R    S Q I   V ELS D          I TL  GRL    P  L*DNA PL        TD EA  VC*  V I   S #  LK V* 
Conservation:  4267879699792752684588844575541424222123121717317247227249219118129129249255544014004025115016126015
SS_PSIPRED:    EE    EE   HHH                                                                                      
SS_SPIDER3:    E H HE EE                                                                                           
SS_PSSPRED:        EEE                                                                                             
DO_DISOPRED3:          DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                     DDDDDDDD    DDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            LPGYKGEPGRDGDKGDRGLPGFPGLHGMPGSKGEMGAKGDKGSPGFYGKKGAKGEKGNAGFPGLPGPAGEPGRHGKDGLMGSPGFKGEAGSPGAPGQDGT 600
BenignSAV:                                                                S                      R                 
gnomAD_SAV:     S DR  S *GDV   H         D       I V  # RL      Q       K     F   P  R   # G I   TS      TSS L H   
Conservation:  1180271281160382280382271381361382041231140251142241441160191261160271381181262171181543150040141251
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            RGEPGIPGFPGNRGLMGQKGEIGPPGQQGKKGAPGMPGLMGSNGSPGQPGTPGSKGSKGEPGIQGMPGASGLKGEPGATGSPGEPGYMGLPGIQGKKGDK 700
gnomAD_SAV:    #     S V   Q  T  T  S S   *    D     *R  S  SD  A SV EE        V   V   Q #  TMV        # SE  EE    
Conservation:  0514421424501610413520513611511711601611611623701800725821831701801612812601711701524711624512514721
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            GNQGEKGIQGQKGENGRQGIPGQQGIQGHHGAKGERGEKGEPGVRGAIGSKGESGVDGLMGPAGPKGQPGDPGPQGPPGLDGKPGREFSEQFIRQVCTDV 800
BenignSAV:                                                   D                                                     
gnomAD_SAV:     S D   T*    G  T R          R            A QSDT  N VP M   I  T   R SWES   RTRA    TRSV  QK  **I*  I
Conservation:  7218138028038118118049028118208048537116518039017238328117118228358027217137257136443311441242246124
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                             H          
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD    

                       10        20        30        40        50        60        70        80        90     
AA:            IRAQLPVLLQSGRIRNCDHCLSQHGSPGIPGPPGPIGPEGPRGLPGLPGRDGVPGLVGVPGRPGVRGLKGLPGRNGEKGSQGFGYPGEQGPPGPPGPEGP 900
BenignSAV:                         P     A                                                                         
gnomAD_SAV:     *GH SI  L  K    #  PY  A #       L   K  K  T F   HCFLV      L          R   G  N*R  ##   S   L     R
Conservation:  5213340431202221812812211119258138228418219246237218038127168127108156227107167136130081373683382295
SS_PSIPRED:          HHH                                                                                           
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:          DD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50       
AA:            PGISKEGPPGDPGLPGKDGDHGKPGIQGQPGPPGICDPSLCFSVIARRDPFRKGPNY 957
gnomAD_SAV:    TRV EQ  S       EEEG#  S     A # D  H   Y   TS #VLL # LH 
Conservation:  270342513713603512312512502504523737445364222112234135200
SS_PSIPRED:                                                             
SS_SPIDER3:                                                             
SS_PSSPRED:                                                             
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD BDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDD   DDDDDD