Q96PN7  TREF1_HUMAN

Gene name: TRERF1   Description: Transcriptional-regulating factor 1

Length: 1200    GTS: 7.391e-07   GTS percentile: 0.116     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 9      gnomAD_SAV: 546      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MGDQQLYKTNHVAHGSENLFYQQPPLGVHSGLNHNYGNAVTGGGMDAPQASPISPHFPQDTRDGLGLPVGSKNLGQMDTSRQGGWGSHAGPGNHVQLRGN 100
BenignSAV:                                                                         I                 G             
gnomAD_SAV:              Y  R N           I NR  R D      DR VGL #L VT#N    KWV VD SI   S D    L  RVCEN    V R   H K
Conservation:  8455545616312323541744413231112445386011475422216257388444542412333322232221361322219734344556331434
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                       EE                                                                          EE   
SS_PSSPRED:                       EE                                                                          E    
DO_DISOPRED3:  BDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDD DDDDDDDDDDDDDDDDD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            LANSNMMWGAPAQAEPTDGYQYTYSQASEIRTQKLTSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHTQSAVMDGAPDSALRQLLSQKPMEPPAPAIPSR 200
gnomAD_SAV:     G   #I# T  H     D  CA F   KTQ  # IRS     N       K   Q #   T E   PEA MV  D   VVH# P  R V A  L #  H
Conservation:  3133322944133161064634232423201158155355558888566932573438354356123233122331164346668435313213211113
SS_PSIPRED:                        EEEEE  HHH        HHH   HHHHHH           HHH      HHH     HHHHHHH               
SS_SPIDER3:                EEE     EEEE           E   E     HHHHHH          HHHH              HHHHHH               
SS_PSSPRED:                         E                        HHHH      E                     HHHHHHHH              
DO_DISOPRED3:  DDDDDDDDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDD                   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDD  DDDDDDDDDDDDDDDDDDDDDDDD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDD   DDDDDDDDDDDD      D  D                      D     DDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            YQQVPQQPHPGFTGGLSKPALQVGQHPTQGHLYYDYQQPLAQVPVQGGQPLQAPQMLSQHMQQMQQHQYYPPQQQQQAGQQRISMQEIQTQPQQIRPSQP 300
gnomAD_SAV:       MS K P D I  R  T#   #P SNR  Q   HE    E            P#    VEH K  R  LL  E ETR  C   #   M L   CS R 
Conservation:  3530264041231103233123114231645346556622252314203225132254331341570484251132501323221564134343133334
SS_PSIPRED:                                                          HHHHHHHHHHHHHH    HHHHHHHH  HHHHHHH           
SS_SPIDER3:                                                          H    H  H                       H             
SS_PSSPRED:                                                              HHHHHHHHHH                                
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDD DDD  D DDDD  D   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            QPPPQQQQPQQLQLQQRQGSMQIPQYYQPQPMMQHLQEQQQQQMHLQPPSYHRDPHQYTPEQAHTVQLIPLGSMSQYYYQEPQQPYSHPLYQQSHLSQHQ 400
gnomAD_SAV:     LL   R #     P Q S T V  CHE PS  HYWE    E       P YS R     # PDA            N  K      Q#V H R Q R E
Conservation:  1111111321325434451422133514142115464424343224544266551227213124215434452254813622421444335465132324
SS_PSIPRED:             HHHHHHHHH      HH    HHHHHHHHHHHHH                     HHH                               HH
SS_SPIDER3:             H HHHHH                  HHHHHHHHH                                                         
SS_PSSPRED:            HHHHHHHHHH                 HHHHHHH                                                          
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDD DDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            QREDSQLKTYSSDRQAQAMLSSHGDLGPPDTGMGDPASSDLTRVSSTLPHRPLLSPSGIHLNNMGPQHQQLSPSAMWPQMHLPDGRAQPGSPESSGQPKG 500
BenignSAV:                                   A                                                                     
gnomAD_SAV:     L#H   N H N  EV VV   L       A V   GG    QDG     H IP H       VE       AR      Q #N   H         L  
Conservation:  1151031312002201121112313110320301100012202211114422022222122421221224074220737223351310216532221021
SS_PSIPRED:     HHHHHHH    HHHHHHHHH                                                                               
SS_SPIDER3:         H      HHHHHHH                                                                                 
SS_PSSPRED:                HHHHHHHHH                                                                               
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:                                                                                                S         

                       10        20        30        40        50        60        70        80        90     
AA:            AFGEQFDAKNKLTCSICLKEFKNLPALNGHMRSHGGMRASPNLKQEEGEKVLPPQPQPPLPPPPPPPPPPQLPPEAESLTPMVMPVSVPVKLLPPKPSSQ 600
BenignSAV:                           S                                R                                            
gnomAD_SAV:    VSE R  #NT        RD  S    S   L  R VS  #SFR     TA L  RH QVQ L L SRL  F  K    ML#           L#  RF 
Conservation:  0214303123683954947686788999997999793733723662753543365345559557711111333372322095769998986422433205
SS_PSIPRED:               EE  HHHHHHH   HHHHHHHHH          HHH                            HH                       
SS_SPIDER3:        H            HHHH   H                                                                           
SS_PSSPRED:                    HHHHH     HHHHHH                                                                    
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDD                 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
ZN_FING:                  LTCSICLKEFKNLPALNGHMRSH                                                                  

                       10        20        30        40        50        60        70        80        90     
AA:            GFTNSTVAAPSARDKPASSMSDDEMPVLEIPRKHQPSVPKAEEPLKTVQEKKKFRHRPEPLFIPPPPSYNPNPAASYSGATLYQSQLRSPRVLGDHLLLD 700
gnomAD_SAV:    E I  PA VLPVG E   L L #   G K     H   L PG     #R R  L# W    # L#L TCSSSST A # TI        LLI R YMF  
Conservation:  2222434354112125241213232237301320121010041005113255426736487377441302111112113326437588874437711984
SS_PSIPRED:                                                HHHHHHHH                                                
SS_SPIDER3:                                               HHHHHHHHHH                                               
SS_PSSPRED:                                                   HHHHH                                                
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDD  DDD 
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DD D  DDDDDDDDDD
MODRES_A:                                      K      K                                                            

                       10        20        30        40        50        60        70        80        90     
AA:            PTHELPPYTPPPMLSPVRQGSGLFSNVLISGHGPGAHPQLPLTPLTPTPRVLLCRSNSIDGSNVTVTPGPGEQTVDVEPRINIGLRFQAEIPELQDISAL 800
BenignSAV:                                                                      I                                  
gnomAD_SAV:     AYD SS R     N M     F I     S  S T L      MM     R F  # M    MMIS  R    AG   H  V FS    V    GV T 
Conservation:  2144534998786757492877764446121311132216534414545642543334343310225464464344659499691399926934410102
SS_PSIPRED:                               EE                     EEEEE                        EEEE HHH         HHHH
SS_SPIDER3:                                E                      EEEEE         E        EE   EEE  H H  E      HHHH
SS_PSSPRED:                                                                                    EE                  
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                            
DO_SPOTD:                   D        DD  DDDDDDDDDDDD                                                              
DO_IUPRED2A:   DDDDDDDDDDDDDDDDD       DDDDDDD  DDDDDDDDDDD  DD    D        DDDDDDDDDDDDDDDDD                   D  
MODRES_P:                                                                        T                                 

                       10        20        30        40        50        60        70        80        90     
AA:            AQDTHKATLVWKPWPELENHDLQQRVENLLNLCCSSALPGGGTNSEFALHSLFEAKGDVMVALEMLLLRKPVRLKCHPLANYHYAGSDKWTSLERKLFNK 900
BenignSAV:                                      S                                                                  
gnomAD_SAV:    G  IPE         Q       R A     F S NT           F     T   M   V     W T K                   P      R
Conservation:  0170649286958314673211645952774558985679995929559948665497461677389421216121444549999989295119764545
SS_PSIPRED:    HH      EEE   HHH   HHHHHHHHHHHHHH          HHHHHHHHHH    HHHHHHHHH                        HHHHHHHHH
SS_SPIDER3:    H     EEEEE   H H  HHHHHHHHHHHHHH           HHHHHHHHHH    HHHHHHHHH               E        HHHHHHHHH
SS_PSSPRED:            EE           HHHHHHHHHHHHH          HHHHHHHHHHH   HHHHHHHHHH                       HHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            ALATYSKDFIFVQKMVKSKTVAQCVEYYYTWKKIMRLGRKHRTRLAEIIDDCVTSEEEEELEEEEEEDPEEDRKSTKEEESEVPKSPEPPPVPVLAPTEG 1000
gnomAD_SAV:     I#I R         G        M     GEEMTLP  E WAHM    NY AP   GK  Q     AL       E  G K L  R   AILIP  M  
Conservation:  8602539992278557655466887876566644455324143332110341244245232114424213143220232101011353333112243141
SS_PSIPRED:    HHHH    HHHHHHH     HHHHHHHHHHHHHH          HHHHH      HHHHHHHHHHH   HHHHH  HHHH                    
SS_SPIDER3:    HHHH    HHHHHHH     HHHHHHHHHHHHHH            HHHH       HHHHHH             HHH                     
SS_PSSPRED:    HHHHH   HHHHHH      HHHHHHHHHHHHHH        HHHH                                                      
DO_DISOPRED3:                                       DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                         DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                          DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:                                                           TS                                             

                       10        20        30        40        50        60        70        80        90     
AA:            PPLQALGQPSGSFICEMPNCGAVFSSRQALNGHARIHGGTNQVTKARGAIPSGKQKPGGTQSGYCSVKSSPSHSTTSGETDPTTIFPCKECGKVFFKIKS 1100
BenignSAV:                       T                                                                                 
gnomAD_SAV:    L  H   ETLSP      SG      Q       C  R I  A   Q S           # A YLA          SK  L    A             
Conservation:  3211111120235386563794395977545643637343311131122111042501203222375558856856956883234799569565948799
SS_PSIPRED:                EE         EE HH                                                        EEE      EEEHHHH
SS_SPIDER3:                EE E          EH                                                         EE H  HHHHHHH  
SS_PSSPRED:               EEEE       EEEEE                                                                 HHHHHHH 
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                 
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD       DD  DDDD
DO_IUPRED2A:   DDDDDDDDD                DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                
ZN_FING:                   FICEMPNCGAVFSSRQALNGHARIH                                                FPCKECGKVFFKIKS

                       10        20        30        40        50        60        70        80        90     
AA:            RNAHMKTHRQQEEQQRQKAQKAAFAAEMAATIERTTGPVGAPGLLPLDQLSLIKPIKDVDILDDDVVQQLGGVMEEAEVVDTDLLLDDQDSVLLQGDAEL 1200
BenignSAV:                                                                                           N             
gnomAD_SAV:    Q            R#S   K V    D    T   M#LM VL      E  V# TSR#  V NNNII       # T AMN N   N    I  #  S  
Conservation:  8999999989666342643544213342432305411422310236244237263131331232542233432121142322175922231355322322
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH            HHH      HHHHHH  HHHHHHH           HHH                
SS_SPIDER3:      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                H              HHHHHHH        EE HHH                
SS_PSSPRED:     HHHHH HHHHHHHHHHHHHHHHHHHHHHHHHH                                 HHH                               
DO_DISOPRED3:    DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDBBBBBBDDDBBDDDDDDDDDDDDD  DDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                             DDD  DDDDDD
DO_IUPRED2A:    DDDDDDDDDDDDDDDDDDDDDDDDDDD D DDDDDDDDDD                               D                           
ZN_FING:       RNAHMKTH