Q96SZ6  CK5P1_HUMAN

Gene name: CDK5RAP1   Description: Mitochondrial tRNA methylthiotransferase CDK5RAP1

Length: 601    GTS: 2.185e-06   GTS percentile: 0.718     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


            gnomAD_SAV: 279      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MHPLQCVLQVQRSLGWGPLASVSWLSLRMCRAHSSLSSTMCPSPERQEDGARKDFSSRLAAGPTFQHFLKSASAPQEKLSSEVEDPPPYLMMDELLGRQR 100
gnomAD_SAV:     QTS* A   L F  C    FM   L S      R    T  R    D  TQ          LAS  V* N   SP   F DE  # SC TT GFVE H 
Conservation:  2222222020010112211110000000000001100001001011100211113122311441411433212211000000020111221000011102
STMI:          TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT                                                                   
SS_PSIPRED:       HHHHHH            HHHHHHHHHHHHHH                   HHHHH     HHHHHHH                    HHHHH    
SS_SPIDER3:       HHHHHHHHHH        HHHHHHHH  H                      HHHH H    HHHHHHH                    HHHH     
SS_PSSPRED:       HHHHHHHH          HHHHHHHHHHHHH                 HHHHHHHH     HHHHHHH                     HHHH    
DO_DISOPRED3:  BBBBBDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                           DDDDD                 
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                  DDDDDDDDDDDD                
DO_IUPRED2A:                                        DDDDDDDDDDDDDDDDD                     DDDDDDDDDD               

                       10        20        30        40        50        60        70        80        90     
AA:            KVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQEADVILLVTCSIREKAEQTIWNRLHQLKALKTRRPRSRVPLRIGILGCMAERLKEEILNREKMVD 200
gnomAD_SAV:      C A HS          P  L E R C W    RG    F  IR  G  S *  * #  K       WSL WFH #T LP  #   F  G  D      
Conservation:  3656866889865585454445842297175102157776775796675557445835823542471451130134566667666567626672595378
SS_PSIPRED:    EEEEEEE     HHHHHHHHHHHHH   EE   HHH  EEEEEE   HH HHHHHHHHHHHHHHHHHH       EEEEEE  HHHHHHHHHHHH     
SS_SPIDER3:    EEEEEEE      HHHHHHHHHHHH   EE   HHH  EEEEE     HHHHHHHHHHHHHHHHHHHH        EEEEE    HHHHHHHH H   E 
SS_PSSPRED:    EEEEEEE       HHHHHHHHHHHH       HHH  EEEEE   HHHHHHHHHHHHHHHHHHHHHH        EEEEEHHHHHHHHHHHHHH   EE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
METAL:                 C                                   C                                     C                 

                       10        20        30        40        50        60        70        80        90     
AA:            ILAGPDAYRDLPRLLAVAESGQQAANVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPIASILEEVKKLSEQVFLPPRPP 300
gnomAD_SAV:    TF      QN  W      WD *   M    EK    IT  *S V  M  SL V#Q    L R# V  VIG K   # TTC   *L #P           
Conservation:  5489967663553953432363454985965459887549541222325768979999777966967979997999794297639753863222222222
SS_PSIPRED:    EEE HHHHHHHHHHHHHHHH    EEEE            EE      EEEEEEE                       HHHHHHHHHHHHHH        
SS_SPIDER3:    EEE   HHHHHHHHHHHHH     EEEEE     EE    EE      EEEEEE         E E            HHHHHHHHHHHHHH        
SS_PSSPRED:    EEE   HHHHHHHHHHHHHHH HHHHHHH            E      EEEEEE                        HHHHHHHHHHHHHHH       
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
METAL:                                                                  C   C  C                                   

                       10        20        30        40        50        60        70        80        90     
AA:            KVLGLQGLKEVTLLGQNVNSFRDNSEVQFNSAVPTNLSRGFTTNYKTKQGGLRFAHLLDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHL 400
gnomAD_SAV:              M   # D    W  # I   G    D N#  N #     E  C     EHI         CL F   E  S       DA E N     V
Conservation:  2222267567566756869875919325512111405648725386162895695489736627663577999979999999997576269196946566
SS_PSIPRED:           EEEEEE            HH                          HHHHHHHHHH      EEE         HHHHHHHHH          
SS_SPIDER3:          EEEEEEE    E        HH             E  E      E HHHHHHHHH   HH EEE          HHHHHHHH    HHHH E 
SS_PSSPRED:            EEEE                                         HHHHHHHHHH     EEEE         HHHHHHHHHH HHHHH   
DO_DISOPRED3:                                     DDD                                                              
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                          DD                           D  DDD        D                 

                       10        20        30        40        50        60        70        80        90     
AA:            PAQSGSSRVLEAMRRGYSREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSLLREVQYNMGFLFAYSMRQKTRAYHRLKDDVPEEVKLRRLE 500
gnomAD_SAV:      *# #TCM    Q #C   T LG#  Y G  VTDM    N V      M QG I IA  VW  ** #S  SV  V R  W  PG  G  LQ  RV HW 
Conservation:  9689685379349399755648439524551266452646768488949463883465655538365357576864947736575829684214825764
SS_PSIPRED:          HHHHHHH     HHHHHHHHHHHHHH    EEE  EE       HHHHHHHHHHHHH     EEE EE      HHHHH      HHHHHHHHH
SS_SPIDER3:           HHHHHHH    HHHHHHHHHHHHHH    EEEEEEEE      HHHHHHHHHHHHH      EEE         HHH       HHHHHHHHH
SS_PSSPRED:          HHHHHHHHH   HHHHHHHHHHHHHH    EEE           HHHHHHHHHHHHHHHHHH  EEE      HHHHHH      HHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:             D                                                                         D               

                       10        20        30        40        50        60        70        80        90     
AA:            ELITIFREEATKANQTSVGCTQLVLVEGLSKRSATDLCGRNDGNLKVIFPDAEMEDVNNPGLRVRAQPGDYVLVKITSASSQTLRGHVLCRTTLRDSSAY 600
gnomAD_SAV:    G   # *V  A    I     HV    AV  CPT E   K        S#  Q     KS P  ST   Y  V   I  G RI KA G  K    Y    
Conservation:  7642368468244711256314869788196682148599676636857621321100201012141384693655254333355612222234110100
SS_PSIPRED:    HHHHHHHHHHHHHHHHH   EEEEEEE          EEE     EEE   HHH                EEEEEEEE    EEEEEEEEEEE       
SS_SPIDER3:    HHHHHHHHHHHHHHH     EEEEEEE      HHHH EE     EEEE              E      EEEEEEEEE   EEEEEEEEEEEE     E
SS_PSSPRED:    HHHHHHHHHHHHHHHHH  EEEEEEEE                  EEE                     EEEEEEEEE    EE EEEEEEE HHH    
DO_DISOPRED3:                                                                                                     D
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                             DDD                                       

                
AA:            C 601
gnomAD_SAV:    W
Conservation:  1
SS_PSIPRED:     
SS_SPIDER3:    E
SS_PSSPRED:     
DO_DISOPRED3:  D
DO_SPOTD:       
DO_IUPRED2A: