Q96T60  PNKP_HUMAN

Gene name: PNKP   Description: Bifunctional polynucleotide phosphatase/kinase

Length: 521    GTS: 3.493e-06   GTS percentile: 0.954     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 6      BenignSAV: 7      gnomAD_SAV: 389      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MGEVEAPGRLWLESPPGGAPPIFLPSDGQALVLGRGPLTQVTDRKCSRTQVELVADPETRTVAVKQLGVNPSTTGTQELKPGLEGSLGVGDTLYLVNGLH 100
PathogenicSAV:                                                  E                                                  
BenignSAV:                       VS                                          V                                     
gnomAD_SAV:         TLALFC  TS # VLALL S  E*   V  ESR   RY      LM      * QRMV  ER#  LT       NRES    RA YI   #S  Q
Conservation:  4200120312051211201366316025126347846233316444541474546521031514263636632341008216123051132473658327
SS_PSIPRED:            EEEEE        EE      EEEE                 EEEEEE    EEEEEE          EEE    EEE     EEEEE    
SS_SPIDER3:       E    EEEEE        EE      EEEE       EEE       EEEEEE    EEEEEE          EE     EEE     EEEE     
SS_PSSPRED:            EEEEE         E      EEEE       EEE       EEEEE     EEEEEE          EE     EEE    EEEEEE    
DO_DISOPRED3:  DDDDDD                                                                                              
DO_SPOTD:      DDDDD                                                                                               
DO_IUPRED2A:       DDDDDDDDDDDDDDDDDDDDDDDDDD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                

                       10        20        30        40        50        60        70        80        90     
AA:            PLTLRWEETRTPESQPDTPPGTPLVSQDEKRDAELPKKRMRKSNPGWENLEKLLVFTAAGVKPQGKVAGFDLDGTLITTRSGKVFPTGPSDWRILYPEIP 200
PathogenicSAV:                                                                            F                        
BenignSAV:                                                                                    S               N    
gnomAD_SAV:      I H   NCIR  * HSL   H M       #  AR PTQN D V  S       NS EA   D  T L   R P AAC E   S  RGA T SF# M 
Conservation:  4425031100021121324202301120103100200410400121742222443633364144187958857765866386888643539966863564
SS_PSIPRED:      EEEE                                         HH  EEEEEE         EEEE     EEE          HHHHHHH   HH
SS_SPIDER3:    EEEEEE                      H                      EEEEEEE      EEEEEE    EEEE     E    HHHHHHH   HH
SS_PSSPRED:      EEEE                      HHHHHH  HHH             EEEEE         EE      EEEE              EE  HH H
DO_DISOPRED3:              DDDDDDDDDDDDDDDDD                                                                       
DO_SPOTD:                DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                         
DO_IUPRED2A:       DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                    D D                 
MODRES_P:                   S   T   T                                                                              

                       10        20        30        40        50        60        70        80        90     
AA:            RKLRELEAEGYKLVIFTNQMSIGRGKLPAEEFKAKVEAVVEKLGVPFQVLVATHAGLYRKPVTGMWDHLQEQANDGTPISIGDSIFVGDAAGRPANWAPG 300
gnomAD_SAV:    HN    KSK  E    II  NMRCR V TK  *    D M*  #IS  M   M  CFCQ L M T     KP D#RMS F E  V   ETGRCLTSCV V
Conservation:  3692291129585565866759366662533974948474119355376757634943888418863564343435206220153665456686224255
SS_PSIPRED:    HHHHHHHH   EEEEEE           HHHHHHHHHHHHHHH   EEEEEE           HHHHHHHHHH           EEEE            
SS_SPIDER3:    HHHHHHHH   EEEEEEE          HHHHHHHHHHHHHHH   EEEEEE          HHHHHHHHHH        H EEEEE             
SS_PSSPRED:    HHHHHHHHH  EEEEEE           HHHHHHHHHHHHHHH   EEEEEE           HHHHHHHHHH          EEEE             
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                      DDD                              

                       10        20        30        40        50        60        70        80        90     
AA:            RKKKDFSCADRLFALNLGLPFATPEEFFLKWPAAGFELPAFDPRTVSRSGPLCLPESRALLSASPEVVVAVGFPGAGKSTFLKKHLVSAGYVHVNRDTLG 400
PathogenicSAV:                          K                                                W                         
gnomAD_SAV:    L    LPWTH#  TF F  L  S     F *S V  K  #  L A CCPR#F#F#*F  F #TNLGAA V  ##  R  A # Q   WS#  Y  G AP#
Conservation:  4566665535546755334361455536834305150361556512110214326433173311384666686956886553224455287144476456
SS_PSIPRED:              HHHHH        HHHHH                           HHHHH     EEEEEE        HHHHHH     EEEE HHH  
SS_SPIDER3:              HHHHH        HHHHHH                            H       EEEEEE        HHHHHHHH    EEE  HH  
SS_PSSPRED:            HHHHHHHH        HHHH                            HHHH     EEEEEE        HHHHHHHH    EEEE     
DO_DISOPRED3:                                                     DDDDDD                                           
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
NP_BIND:                                                                              GFPGAGKS                     

                       10        20        30        40        50        60        70        80        90     
AA:            SWQRCVTTCETALKQGKRVAIDNTNPDAASRARYVQCARAAGVPCRCFLFTATLEQARHNNRFREMTDSSHIPVSDMVMYGYRKQFEAPTLAEGFSAILE 500
PathogenicSAV:         R                                                    P                                      
BenignSAV:                                             G                                    G                      
gnomAD_SAV:      *C GP#   T   R PIS#ND S#AT#NH# NDH  #TVSIL HR I I  V LVHQ DQLPKT N FLTLM N#GLH# S  LQ##  DASV  LPK
Conservation:  4742853262149223234467784551244276313321243347741624444346653566444111712445553245332411713157412452
SS_PSIPRED:     HHHHHHHHHHHHH    EEEE     HHHHHHHHHHHHH    EEEEEEE  HHHHHHHHHHH           HHHHHHHHHH     HHH    EEE
SS_SPIDER3:     HHHHHHHHHHHHH   EEEEE     HHHHHHHHHHHHH    EEEEEE   HHHHHHHHHHHHH       HHHHHHHHHHHH     HH    EEEE
SS_PSSPRED:     HHHHHHHHHHHHHH   EEE      HHHHHHHHHHHHHH   EEEEEE   HHHHHHHHHH            HHHHHHHHHH           EEEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                               D D DD                                  

                       10        20 
AA:            IPFRLWVEPRLGRLYCQFSEG 521
gnomAD_SAV:    ML GQ*LK   AQ * * CQS
Conservation:  434250122212194165524
SS_PSIPRED:    E  EE   HHHHHHHHHHH  
SS_SPIDER3:     E      HHHHHHHH     
SS_PSSPRED:    EEEEEE  HHHHHHHHHH   
DO_DISOPRED3:                       
DO_SPOTD:                          D
DO_IUPRED2A: