Q9BY66  KDM5D_HUMAN

Gene name: KDM5D   Description: Lysine-specific demethylase 5D

Length: 1539    GTS: 7.858e-07   GTS percentile: 0.134     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 1      gnomAD_SAV: 261      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MEPGCDEFLPPPECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVDNFRFTPRVQRLNELEAQTRVKLNYLDQIAKFWEIQGSSL 100
gnomAD_SAV:      Q#          L I       R     V   M   GT      C          AQ  S     CI                      L        
Conservation:  1110001001100121012111110111000011111111001211111125354544432253647556655685734566855664456554344525
SS_PSIPRED:                        HHHH  HHHHHHHHHHHHHHH  EEE                     EEEEHHHHHHH    HHHHHHHHHHHHHH    
SS_SPIDER3:                   EEE  HHHH  HHHHHHHHHHHHHH  EEEEE         EE      E  EEE HHHHHH   HHHHHHHHHHHHHHH     
SS_PSSPRED:                        HHHH  HHHHHHHHHHHHHH  EEEEE         EEE           HHHHHHHHH HHHHHHHHHHHHHHHH    
DO_DISOPRED3:  BBBBBBBBBBBBDD   DDDDDDDDDDDD                                                                       
DO_SPOTD:      DDDD                                                                                                
DO_IUPRED2A:    DD                                                                                                 

                       10        20        30        40        50        60        70        80        90     
AA:            KIPNVERKILDLYSLSKIVIEEGGYEAICKDRRWARVAQRLHYPPGKNIGSLLRSHYERIIYPYEMFQSGANHVQCNTHPFDNEVKDKEYKPHSIPLRQS 200
gnomAD_SAV:     T S          F  F            GHQ         H     T C       LV            RM G   Q  #           M     
Conservation:  4471334326554173456135877425555638546524517335653855552756544575336326342220111310131121301014313121
SS_PSIPRED:            EEEHHHHHHHHHHH  HHHHH    HHHHHHH        HHHHHHHHHHHHHHHHHHHHH                               
SS_SPIDER3:       E   EEE HHHHHHHHHH   HHHHH    HHHHHHH        HHHHHHHHHHH  HHHHHH                                 
SS_PSSPRED:        E      HHHHHHHHHHH  HHHHHHH HHHHHHHHH       HHHHHHHHHHHHH  HHHHH                                
DO_DISOPRED3:                                                                          DDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                                DDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                               DDDDDDDDDDDDDD DDDDDDD  

                       10        20        30        40        50        60        70        80        90     
AA:            VQPSKFSSYSRRAKRLQPDPEPTEEDIEKHPELKKLQIYGPGPKMMGLGLMAKDKDKTVHKKVTCPPTVTVKDEQSGGGNVSSTLLKQHLSLEPCTKTTM 300
gnomAD_SAV:           N  GW       R  #      P    N  MH  R      V    G V  L     Y    S   V   D     A    #      #    
Conservation:  1311212102455453313121113222334354232211231312110101114251111111111111111410010011111111110002011111
SS_PSIPRED:                             HHH   HHH                                   EE           HHHHHH            
SS_SPIDER3:              HH           HHHHH  HHH                                    E            HHHHHHH          H
SS_PSSPRED:                                                                                         HHH            
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDD DD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD          DDD          DDDDDDDDDDDDDDDDDDDDDD                
MODRES_P:                                                                                                S         

                       10        20        30        40        50        60        70        80        90     
AA:            QLRKNHSSAQFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILAECKQPPEAFGFEQATQEYSLQSFGEMADSFKSDYFN 400
gnomAD_SAV:                  C     F                   V     L                   E         E               F  FN  S
Conservation:  3031120312355243833722533456654755844347545828761536452856836433542462455656551335554445554536544686
SS_PSIPRED:                  EE            EEE                                       HH        EE HHHHHHHHHHHHHHH  
SS_SPIDER3:    H             EEEH          EEE         HEH                  E EE      H           HHHHHHHHHHHHHHH  
SS_PSSPRED:                HHHE             E                                 HHH                 HHHHHHHHHHHHHHH  
DO_DISOPRED3:  DDDDDDDDDD                                                                                          
DO_SPOTD:      DDDDDDDDDD                                                                                          
DO_IUPRED2A:                                                                                                       
ZN_FING:                      ICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCI                                      
MODRES_P:            S                                                                                             

                       10        20        30        40        50        60        70        80        90     
AA:            MPVHMVPTELVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVSNSKQNLSPEEKEYATSGWNLNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSA 500
gnomAD_SAV:              A      Q       M       T                         V N R    IA          ST       S          
Conservation:  4756754544575476476236556769778677355558688820241016223551931576565546452245746544576776677777776675
SS_PSIPRED:           HHHHHHHHHHHH      EEEEEE                      HHHHHHH                HHHH          EEEEEE EEE
SS_SPIDER3:           HHHHHHHHHHHH      EEEEEEEE                    HHHHHHHH               EH            EEEE EEEEE
SS_PSSPRED:           HHHHHHHHHHHHH     EEEEE                       HHHHHH                HHH            HHHHHHHHHH
DO_DISOPRED3:                                               DDDDDDDDDDD                                            
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:                                    Y                                                                      

                       10        20        30        40        50        60        70        80        90     
AA:            FCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKMLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYN 600
gnomAD_SAV:       R        T C   A         P           I      E            V       R                   H           
Conservation:  7777797777696767658475766848506653561543244676522668798688848886395344486477697797775697576556666667
SS_PSIPRED:    EEEE       EEEEEE    EEEEEE HHHHHHHHHHHHHH HHHHHH   HHHHHH    HHHHHH    EEEEE    EEEEE              
SS_SPIDER3:    EEEEE    E EEEEE      EEEE  HHHHHHHHHHHHHH HHHH     HHHHHHH   HHHHHH    EEEEEE    EEEE              
SS_PSSPRED:    H                     EEEE  HHHHHHHHHHHHHH HHHHHH HHHHHHHHHH  HHHHHH    EEEEEE   EEEEE              
DO_DISOPRED3:                                                        DDDDDDDD                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:                  S N       K                                                                              
METAL:            H E                                                                                     H        

                       10        20        30        40        50        60        70        80        90     
AA:            FAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPETLDLNLAVAVHKEMFIMVQEERRLRKALLEKGVTEAEREAFELLPDDERQCIKC 700
gnomAD_SAV:                    SR      Q Q S   F       V         D P  LR   LV     QC         I Q DQ     F          
Conservation:  7667655674675428627628861618788877577464772343065426833515640144248216720403374112232145246965697039
SS_PSIPRED:     HHH         HHHHHHHHHHHHH       HHHHHHHHHH      HHHHHHHHHHHHHHHHHHHHHHHHHHH    HHHHHHHH        HHHH
SS_SPIDER3:    HHH      HHH H HHHHHHHHHH        HHHHHHHHH       HHHHHHHHHHHHHHHHHHHHHHHHHHH    HHHHH           H   
SS_PSSPRED:              HHHHHHHHHHHHHHHHH H    HHHHHHHHHH      HHHHHHHHHHHHHHHHHHHHHHHHHHHH   HHHHHHHH    HHHHHHHH
DO_DISOPRED3:                            D DDDD                                                DDDDDDDDDD          
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
ZN_FING:                                                                                                       CIKC

                       10        20        30        40        50        60        70        80        90     
AA:            KTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPTMLHKLKIRAESFDTWANKVRVALEVEDGRKRSFEELRALESEARERRFPNSE 800
gnomAD_SAV:        L    T  N  G        S      #       Q               Q     S  D  Q        H              H  S     
Conservation:  5888667652723242136963821278063011216266624438224413631463254183127112521302152240263163145214176332
SS_PSIPRED:           EE          HHHHHHHH       EEEEEEE HHHHHHHHHHHHHHHH HHHHHHHHHHHHH        HHHHHHHHHHHHH     HH
SS_SPIDER3:      EEEEEEEE       E  H HHHHH        EEEEEE HHHHHHHHHHHHHHH  HHHHHHHHHHHHH        HHHHHHHHHHHH       H
SS_PSSPRED:    HHHHHHHHHH       EEEE HHHH      HHHHHHHH  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH        HHHHHHHHHHHHHH    HH
DO_DISOPRED3:                                                                          D  DDDDDDDDDDDD             
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
ZN_FING:       KTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPTM                                                   

                       10        20        30        40        50        60        70        80        90     
AA:            LLQRLKNCLSEVEACIAQVLGLVSGQVARMDTPQLTLTELRVLLEQMGSLPCAMHQIGDVKDVLEQVEAYQAEAREALATLPSSPGLLRSLLERGQQLGV 900
gnomAD_SAV:     H *       A               G      Q     Q      V     L  T   N      QT     C  M     R    QF   S      
Conservation:  5423730330333061114226521221211112453147326623301658141431254246114425412421350113111326317561511616
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHHHHHHH            HHHHHHHHHHH         HHHHHHHHHHHHHHHHHHHHHHH     HHHHHHHHHHHHHH  
SS_SPIDER3:    HHHHHHHHHHHHHHHHHHHHHHH             HHHHHHHHHHH         HHHHHHHHHHHHHHHHHHHHHH      HHHHHHHHHHHHH   
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHHHHHHHHH          HHHHHHHHHHHH         HHHHHHHHHHHHHHHHHHHHHH     HHHHHHHHHHHHHH  
DO_DISOPRED3:                        DDDDDDDDDDDDDD                                                                
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
MODRES_P:                                                                                         S                

                       10        20        30        40        50        60        70        80        90     
AA:            EVPEAHQLQQQVEQAQWLDEVKQALAPSAHRGSLVIMQGLLVMGAKIASSPSVDKARAELQELLTIAERWEEKAHFCLEARQKHPPATLEAIIRETENIP 1000
gnomAD_SAV:     A        K    R        PS     D    L          # G      Q           C  K  R          A       H      
Conservation:  1464200631333542972273131130111248216628522722534322563346387867656535766521562255232312722431532063
SS_PSIPRED:      HHHHHHHHHHHHHHHHHHHHHHH        HHHHHHHHHHHHHH     HHHHHHHHHHHHHHHHHHHHHHHHHHH      HHHHHHHHHHHH   
SS_SPIDER3:        HHHHHHHHHHHHHHHHHHHHH        HHHHHHHHHHHHH       HHHHHHHHHHHHHHHHHHHHHHHHHH      HHHHHHHHHHHH   
SS_PSSPRED:     HHHHHHHHHHHHHHHHHHHHHHHH        HHHHHHHHHHHHHH     HHHHHHHHHHHHHHHHHHHHHHHHHHH      HHHHHHHHHHHHH  
DO_DISOPRED3:     DDDDDDDD DDDD D DDDDDDDDDDD     D                                                                
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                D         DDD          

                       10        20        30        40        50        60        70        80        90     
AA:            VHLPNIQALKEALTKAQAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASKTFLKKNSCYTLLEVLCPCADAGSDST 1100
gnomAD_SAV:                            A      H   G         Q          E      A       T     R     A V        T   N 
Conservation:  3275532294435158339315542431332241421713542373245617215136525422432955263338303441347577657214231010
SS_PSIPRED:       HHHHHHHHHHHHHHHHHHHHHHHH       HHHHHHHHHHHH     HHHHHHHHHHHHHHHHHHHHHHHHH     HHHHHHHHHHH       H
SS_SPIDER3:       HHHHHHHHHHHHHHHHHHHHHHHH       HHHHHHHHHHHH     HHHHHHHHHHHHHHHHHHHHHHHHH      HHHHHHHHHH      HH
SS_PSSPRED:       HHHHHHHHHHHHHHHHHHHHHHHH       HHHHHHHHHHHH     HHHHHHHHHHHHHHHHHHHHHHHHH     HHHHHHHHHHH        
DO_DISOPRED3:                                                                                        D   DDDDDDDDDD
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            KRSRWMEKALGLYQCDTELLGLSAQDLRDPGSVIVAFKEGEQKEKEGILQLRRTNSAKPSPLAPSLMASSPTSICVCGQVPAGVGVLQCDLCQDWFHGQC 1200
BenignSAV:                                                                                          L              
gnomAD_SAV:     H      V    HY     R       N    T  LN       A V   CL   G S LQ      P          L  R                 
Conservation:  1413021230111211112324253523444344136222414933232057129216212011111100201374922113122336938954268218
SS_PSIPRED:    HHHHHHHHHH      HHHH   HHHH    HHHHHHHH HHHHHHHHHHHHHHH                 EEEE          EE      EE HHH
SS_SPIDER3:    HHHHHHHHH        H           HHHHHHHHHH  HHHHHHHHHHHHH                   EE           EEE     EE   H
SS_PSSPRED:    HHHHHHHHHH                       E       HHHHHHHHHHHHHH                 EEE          EEEEE         E
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDD D               DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                            
DO_SPOTD:                                                          DDDDDDDDDDDDDDDDD                               
DO_IUPRED2A:                                                  DDDD          DD                                     
ZN_FING:                                                                                ICVCGQVPAGVGVLQCDLCQDWFHGQC

                       10        20        30        40        50        60        70        80        90     
AA:            VSVPHLLTSPKPSLTSSPLLAWWEWDTKFLCPLCMRSRRPRLETILALLVALQRLPVRLPEGEALQCLTERAIGWQDRARKALASEDVTALLRQLAELRQ 1300
gnomAD_SAV:                    P        N         H        V            Q                *  C   #   G  S   G     HR
Conservation:  5111111121011101111223641131679529257367483364386458334456765756834556764298355533322023102110110201
SS_PSIPRED:                       HHHHH    EE           HHHHHHHHHHHH       HHHHHHHHHHHHHHHHHHHHHHH  HHHHHHHHHHHHHHH
SS_SPIDER3:    EE                HHHHH     EE HHH       HHHHHHHHHHHH       HHHHHHHHHHHHHHHHHHHHHHH    HHHHHHHHHHHHH
SS_PSSPRED:    E                                       HHHHHHHHHHHHHH      HHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHH
DO_DISOPRED3:       DDDDDDDDDDDDDDD              DDDDDDDDDDD                                            DDDDDDDDDDD
DO_SPOTD:                                                                                           DDDDDDDDD DDDDD
DO_IUPRED2A:                                                                                                       
ZN_FING:       VSVPHLLTSPKPSLTSSPLLAWWEWDTKFLCPLCM                                                                 

                       10        20        30        40        50        60        70        80        90     
AA:            QLQAKPRPEEASVYTSATACDPIREGSGNNISKVQGLLENGDSVTSPENMAPGKGSDLELLSSLLPQLTGPVLELPEAIRAPLEELMMEGDLLEVTLDEN 1400
gnomAD_SAV:                  I  I    V  D              E  M  L  VV       D                      LM   V#            
Conservation:  1111101111111111111111112211121122224213222112221121111121213132252324345343212202543844474576648572
SS_PSIPRED:    HHH     HH                                               HHHHH   HHH        HHH HHHHHHHHH   EE  HHHH
SS_SPIDER3:    HHH                                                      HHHH               HHHHHHHHHH           HHH
SS_PSSPRED:    HHH                                                      HHHHH              HHHHHHHHHHH         HHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:    DD  DDDDDDDDDDDDDDD    DD    DD DDDDDDDDDDDDDDDDDDDDDDDDDD DD             D  DDD    D   DDD        
MODRES_P:                                                   S                                                      

                       10        20        30        40        50        60        70        80        90     
AA:            HSIWQLLQAGQPPDLDRIRTLLELEKFEHQGSRTRSRALERRRRRQKVDQGRNVENLVQQELQSKRARSSGIMSQVGREEEHYQEKADRENMFLTPSTDH 1500
gnomAD_SAV:      V     S   L                   Q  I#    Q WQ      KKA     R                 Q   R     EH          R
Conservation:  2154125221104001101120111001111010211113431410211111101110311201422111111035231433121111111111111111
SS_PSIPRED:    HHHHHHHH      HHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHH    HHHHHHHHHHHHHHHH  HHH  HHHHHHHHHHHHHH         
SS_SPIDER3:    HHHHHHHH      HHHHHHHHHHHHHHH          HHHHHHHHH        HHHHHHHH HH            HHHHHHHHHH           
SS_PSSPRED:    HHHHHHHHH      HHHHHHHHHHHHHHH        HHHHHHHHH         HHHHHHH                   HHHH              
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDD    DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:      D DDDDD    D  DDDDDD  DD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        4
AA:            SPFLKGNQNSLQHKDSGSSAACPSLMPLLQLSYSDEQQL 1539
gnomAD_SAV:           K              H       F      H 
Conservation:  111111111111122002102020111110123311111
SS_PSIPRED:                            HHH            
SS_SPIDER3:                                           
SS_PSSPRED:                                           
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDD   D  D