Q9H158  PCDC1_HUMAN

Gene name: PCDHAC1   Description: Protocadherin alpha-C1

Length: 963    GTS: 2.068e-06   GTS percentile: 0.677     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 1      gnomAD_SAV: 565      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MVGCGVAVLCLWVSCGAAAGQLEYSVPEETERGVAVGNLSADLRLPAAAMSSRNFRFLSSHRELYFGVDLPSGNLVVREPADREQLCRAKAACVLTYDLV 100
gnomAD_SAV:       S#  IFYF #   G  V  QC   * S Q     S       L DSRPLW  # F  YCQV L #E L# SF  T #  GDH G #  DYIFS*NPM
Conservation:  0110010210311111121334253426621183186363175353321522633441311221650441149252623437972472011272323443
STMI:          SSSSSSSSSSSSSSSSSS                                                                                  
SS_PSIPRED:     HHHHHHHHHHHHHHHHH        HHH    EE  HHHHH    HHHHHH  EEEE     EEEEE     EEEE     HHHHHH    EEEEEEEE
SS_SPIDER3:      HHHHHHHHHHHH  HHH  EEEEE        E   HHHH    HHHHHH   EEE      EEEEE    EEEE  E  HHHH      EEEEEEEE
SS_PSSPRED:       HHHHHHHHHHHHHHHHH              EEEHHHHHH   HHHH    EEEE      EEEE     EEEE     HHHHHHHH HEEEEEEEE
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDD                                                                                  
DO_SPOTD:      DDDDDDDDDDDDDDD                                                                                     
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                           N                                                              

                       10        20        30        40        50        60        70        80        90     
AA:            LEDPLELHKIRIHVLDTNDNSPLFPAGDVQLHIPEFLTPGARFTLPNAQDDDEGSNGILSYSLSPSQHFRLDMGSRVDGSEYPELVLEKALDREQRATHL 200
gnomAD_SAV:     K R  P RFQSDI NSSNS    LDD MR  NL    L  H I   T NG K    M  CGQ S  R C N *L#  SRK L S W    NGK C S  
Conservation:  3226332213243527376647183112225253723235544156373725243544328173243461732101013221435582334869212131
SS_PSIPRED:    EE   EEEEEEEEEE             EEEEE                         EEEEE     EEEEEE      EEEEHH           EEE
SS_SPIDER3:    E     EEEEEEEEE             EEEEEE       EEE               EEE      EEEEEEE     EEEEEEEE         EEE
SS_PSSPRED:    EE   EEEEEEEEEEE            EEEEE        EE                  E       EEE          HHHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                              DDDDDDD    DDDD               DD            DD           

                       10        20        30        40        50        60        70        80        90     
AA:            LVLTARDGGLPARSGDAQVTIIVVDTNDNAPVFERSVYRTKVPETAPNGTVLFRVQALDPDEGSNGEVQYSLSNSTQAELRHRFHVHPKSGEVQVAASLG 300
gnomAD_SAV:    PGVA#WNS  RD  EGSE AVT    SGSV  S H L H RF    SS# A  *A#    V R DE   *F  KIK V R* H  M LERR  RA V   
Conservation:  6374718671725663326261758387928183233835252854316565436295928772765507464424223454282442048752422044
SS_PSIPRED:    EEEEEE        EEEEEEEEEE            EEEEE         EEEEEEEE       EEEEEEEE    HHHHHHEEE     EEEE     
SS_SPIDER3:    EEEEEEE     EEEEEEEEEEEE        EE  EEEEEE       EEEEEEE         EEEEEEEE   HHHHHHHEEE     EEEE  E  
SS_PSSPRED:    HHHHEEE        EEEEEEEEEE           EEEEE        EEEEEEE          EEEEE      HHHHHHH       EEEE     
DO_DISOPRED3:                               DDDD D                                                                 
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                       D            DDDDDDDD        DDDDDDDDD     DDDDDDDDDD       DDDDD      DDDD DD  
CARBOHYD:                                                     N                         N                          

                       10        20        30        40        50        60        70        80        90     
AA:            PPETLLEAYIEARDEGVFGLASTAKLLVEVTDVNDHAPELDFLTLSNPVPEDAAPGTVIALFSVKDEDLDSNGRVICGMSSAGPFQLTASFDNYYSLLID 400
gnomAD_SAV:    L  PP   ST #   V# V VI  R    A  LKNRT KM LV PWK    G VS    TF  L N  F   V   G    V R   MS  N#C  V F 
Conservation:  2531257446683628224335355556473858773844142444556386412465786455183824184461514211399263244353946463
SS_PSIPRED:        EEEEEEEEE        EEEEEEEEEE       EEEEEE             EEEEEEEE        EEEEE      EEEEE     EEE   
SS_SPIDER3:       EEEEEEEEEE        EEEEEEEEEEE       EEEEE             EEEEEEEEE        EEEEE     EEEEE    EEEEEE 
SS_PSSPRED:         EEEEEEEEE       EEEEEEEEEEEE      EEEE             EEEEEEE           EEEE       EEEE    EEEEE  
DO_DISOPRED3:                                    D  DDDDD DD                                                       
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                           DDDDDDDD                                                    

                       10        20        30        40        50        60        70        80        90     
AA:            GPLDREQISEYQVLITASDSGSPPLSTRRTITVSVADVNDNTPNFPQPQQELFVAENNGPGASLGRVFAQDPDLGKNGLVSYELLDVISEGPSASSLLAV 500
BenignSAV:                                                                                                      V  
gnomAD_SAV:     S   K LGK #   A  E  ## F IQGI  M    M    L L  LLE   LGKII    CPD*#   NSN R      * V  IT   L S N V  
Conservation:  4189691121856462728392744442335161639698759091211333351888135334215271826133761739253101215234443525
SS_PSIPRED:               EEEEEEE       EEEEEEEEEEE            EEEEEEE       EEEEEEEE        EEEEEEE         EEEEEE
SS_SPIDER3:        HH   EEEEEEEEEE       EEEEEEEEEE            EEEEEE        EEEEEEE       EEEEEEEEE         EEEEEE
SS_PSSPRED:               EEEEEEE          EEEEEEEEEE           EEEEE         EEEEEEE        EEEEEEE         EEEEEE
DO_DISOPRED3:                                         DDD                                                          
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                D           DDDDDDDDD DDDDDDDDD DDDDDDDDDDDD       DDDD                                

                       10        20        30        40        50        60        70        80        90     
AA:            ESSSGAITAKTSFDFEQLRGFHFQVEGRDGGIPPRSATVTINLFVVDRNDNYPVILFPLPRNGSVPVEIVPRSARTGHLVTKVVAEDADSGSNAWLSYHI 600
gnomAD_SAV:        EV   N #    H   V      Q# D        SV  VM GK VSFLIM    L S  I M VL C     YV  T  T   NN  D RIF #T
Conservation:  3423924493248969356261536383929183674234424462917752706427221435122525332412527666636292737299873705
SS_PSIPRED:    E    EEEEEE   HHH  EEEEEEEEE         EEEEEEEEE       EE                       EEEEEEEEE    HHHHHHEEE
SS_SPIDER3:    E    EEEEEE   H HHEEEEEEEEEEE        EEEEEEEEEE      EEEE         EEE         EEEEEEEE      EEEEEEEE
SS_PSSPRED:    E     EEEE    HHHHHHEEEEEEEE        EEEEEEEEEE                                EEEEEEEEE     HHHHHHHE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                      D                                
CARBOHYD:                                                                   N                                      

                       10        20        30        40        50        60        70        80        90     
AA:            SRASDSSLFRISANIGELRTARLVLPTDAVKQRVVVVVRDHGDPPLSSSVTLGVLLSNSVPQLLPDFEDVWEPGGQLSAQNLYLVIALACISFLFLGCLL 700
gnomAD_SAV:     WP    I     KV KF# T *     G   M  I AL L  A V C  S   RWN C L*      VD  S R I   K DF         *    F 
Conservation:  1323322562511339864536241333222324262637471736665334252535124322742120131020351154474457334545744354
STMI:                                                                                             MMMMMMMMMMMMMMMMM
SS_PSIPRED:    EE       EEE      EEEEE         EEEEEEEE      EEEEEEEEEEE  HHH                HHHHHHHHHHHHHHHHHHHHHH
SS_SPIDER3:    EE      EEE      EEEEEE         EEEEEEEE  E   EEEEEEEEEEE          H         HHHHHHHHHHHHHHH HHHHHHH
SS_PSSPRED:    E        EEE    HHHHHHHH      EEEEEEEEE         EEEEEEEEE                     HHHHHHHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                   DD DBDDD                           
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            FFVCTKLHQSPGCCAQSCCRSTEDLRYGSKMVSNPCMTSATIDVTTVERLSQTYLYRASLGLGSDNNSLLLRGEYNAADLRNLATGVGLNLPISCIQIRN 800
gnomAD_SAV:    CLM IN Y #   RS   YC#RGE K  N VI  LFV   AT#I AI T    C C TA E CFGST  Q #EGH  TN *H    IE    MA TH W 
Conservation:  3422253222113622126212110201022223213243245534365434452544343233342223324231232222321422321321112213
STMI:          MMMM                                                                                                
SS_PSIPRED:    HHHHHHHH              HHH               EE          EEEEEEEE        EEEE    HHHHHHH           HH HHH
SS_SPIDER3:    HHHHHHH                                 EEEE        EEEEEEEE        EEEE    HHHHHHH           HHHHH 
SS_PSSPRED:    HHHHHHHH             HHHH               EEE             EEEE        EEE     HHHH               HHHHH
DO_DISOPRED3:                  DDDDDDDDDDDDDDDDD                                           DDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                                                       DDD
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            RKGDHANVNAMPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDK 900
gnomAD_SAV:      RGR   SDTRL     #H  DFP  RVNGA Y #Q D  Q A  R E RCRAL I A#G  V       SV I         E D RR CSH    NI
Conservation:  2252212332322132454545446322322433343343334435344543543412111211311233334323225315243421232227553454
SS_PSIPRED:                          HHH         HHH                                                               
SS_SPIDER3:                          HH          HHH                                         EE  E               H 
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                  DDDDDDDDDDDDDDDDDDDD                         
DO_SPOTD:      DDDDDDDDDDDDDDD  D      D  DDDDDD                      DDDDDDDDDDDDDDDDDDD                          
DO_IUPRED2A:       DDDDDDDDDDDDDDDDDDDD           DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60   
AA:            FIIPGSPAIISIRQEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ 963
gnomAD_SAV:      VAV   MF  Q  #  G TGN  Y I S M  I#    TRR  T    N  RK M E    
Conservation:  533434364445553423132566699797997759766665223323344443222221210
SS_PSIPRED:    EE      EEE              HH    HHH            HHHHHHH          
SS_SPIDER3:    EEE     EEE                E                                   
SS_PSSPRED:    EE      E                           HHH        HHHHH           
DO_DISOPRED3:           DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                    DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD