Q9H9A6  LRC40_HUMAN

Gene name: LRRC40   Description: Leucine-rich repeat-containing protein 40

Length: 602    GTS: 2.079e-06   GTS percentile: 0.682     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 3      gnomAD_SAV: 297      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MSRLKRIAGQDLRAGFKAGGRDCGTSVPQGLLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQSLTDD 100
BenignSAV:                                                         P                                               
gnomAD_SAV:    #*CRT MVE#Y  PDLQ   K  CS LLK   M S  N *  PLS S    LPR    S G H  TIP  PS  A K* *  V A  TM KSR      N
Conservation:  6110121000111132000012000126222211211121112111010146125453436263551244463336578653462764555636205436
SS_PSIPRED:                 HHHH           HHHHHHHHH  EEE          HHHHHHH   HHHH         HHHHH     EEE          HH
SS_SPIDER3:        H                       HHHHHHHHH  EEE          HHHH      HHHH         HHHH      EEEEE  E EE  HH
SS_PSSPRED:      HHHHHH                    HHHHHHHHH   EE          HHHHHHH   HHHHH        HHHHH     EEE        HHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDD D                                                                            
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDD                                                                             
DO_IUPRED2A:                                                                                                       
MODRES_P:                                                                            S                             

                       10        20        30        40        50        60        70        80        90     
AA:            LRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLV 200
gnomAD_SAV:     #  A    VV Q    #T T  T # #  R  K   S      Q   D   P YV VR      V      VPS  YV  LHD   A  GC    P# M
Conservation:  4276556437856774523560453272385482475646204815411812732524636361054134425029446646372611671344081272
SS_PSIPRED:    HHH     EEE          HHHHH     EEE          HHHHH     EEE          HHHHH     EEE          HHHHH     
SS_SPIDER3:    HH      EEE    E     HHHH      EEE          HHHH      EEE    E     HHHH      EEE          HHHH      
SS_PSSPRED:    HHH     EEE        HHHHHHHHH   HHH         HHHHHH     HHH         HHHHHH                  HHHHH     
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            RLNLSSNELKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNK 300
gnomAD_SAV:    # SP I GP  F V LS K    NM   AD #AI#LTQ         FF WSS  HL     F        IRK  V    T    R          HKE
Conservation:  4446227352076134316337537774181632564244181376565543757315925224118767436495630523436326145338688387
SS_PSIPRED:    EEE          HHHHH     EEE          HHHHH     EEE                   EEE          HHHHH      EEE     
SS_SPIDER3:    EEE       E  HHHH      EEE          HHHH      EEE       E           EEE          HHHH       EEE     
SS_PSSPRED:    EEE         HHHHHH                  HHHHH     HHHHH                 EEE          HHHHHHH     EE     
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            LKSVPDEIILLRSLERLDLSNNDISSLPYSLGNLHLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGPSQSESATETAMTLPSESRVNIHAIIT 400
BenignSAV:                                                                                            S            
gnomAD_SAV:      F  N     Q     NI  S   N   *  SID     S R   I T* * V#  I       GRNS H  S    T I  T   S  T     V VK
Conservation:  4424754512612758978499863358224535264353658786845586562669154697956744521011121020778787734165253515
SS_PSIPRED:         HHHHH     EEE          HHHH     EEE          HHHH    HHHHHHH                             HHH   
SS_SPIDER3:          HHHH     EEE       H  H HH     EEEE         HHHH    HHHHHH                           HHHHHH   
SS_PSSPRED:        HHHHHH      E                    EEE       HHHHHHHH   HHHHHHHH              HHH        HHHHHHH  
DO_DISOPRED3:                                                                                DD                    
DO_SPOTD:                                                                            DDDDDDDDDDDDDD                
DO_IUPRED2A:                                                                           DDDDDDDDDDDD D              

                       10        20        30        40        50        60        70        80        90     
AA:            LKILDYSDKQATLIPDEVFDAVKSNIVTSINFSKNQLCEIPKRMVELKEMVSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEMESLVRLQTI 500
BenignSAV:                                                                                                        V
gnomAD_SAV:      V* #    T V S *      GSFIAAV   R KV  MTESI  P       NF  #  A       M #  S   I KT *  #   #       RV
Conservation:  5629254465310785448353211163357767838134917434533343545568965224423450623824474778241386144236136235
SS_PSIPRED:      EEE          HHHHHHHH     EEE          HHHHHHH    EEE          HHHHH     EEE          HHHHH     EE
SS_SPIDER3:      EEE E  E     HHHHHHHH     EEE          HHHH  H    EEE          HHHH      EEE          HHHH      EE
SS_PSSPRED:       EE          HHHHHHH      EEE         HHHHHHHHHHHHHH           HHHHH     EEE         HHHHHH     EE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            NLSFNRFKMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRI 600
gnomAD_SAV:    S  S   N  #    S   I KV NN  RIR   S         AMVV    NV PML   S    IT    E#   Q LQ  M V     V      Q 
Conservation:  3833665414915882313643454457553245602420512829888498776358846849238836263877883987765259845465885588
SS_PSIPRED:    E          HHHHH     EEE          HHHHHH     EEE          HHHHH     EEE         HHHHH   HHHHHHHHH   
SS_SPIDER3:    E          HHHH      EEEE   E      HHHHH     EEE          HHHH      EEEEE        HHHH   HHHHHHHHH   
SS_PSSPRED:    E         HHHHHHH    EEE          HHHHHH     EEE          HHH       EEE         HHHHHHH HHHHHHHHH   
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                      D                                                                

                 
AA:            PT 602
gnomAD_SAV:    LA
Conservation:  63
SS_PSIPRED:      
SS_SPIDER3:      
SS_PSSPRED:      
DO_DISOPRED3:    
DO_SPOTD:       D
DO_IUPRED2A: