Q9HBL6  LRTM1_HUMAN

Gene name: LRTM1   Description: Leucine-rich repeat and transmembrane domain-containing protein 1

Length: 345    GTS: 2.894e-06   GTS percentile: 0.886     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 5      gnomAD_SAV: 227      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MKGELLLFSSVIVLLQVVCSCPDKCYCQSSTNFVDCSQQGLAEIPSHLPPQTRTLHLQDNQIHHLPAFAFRSVPWLMTLNLSNNSLSNLAPGAFHGLQHL 100
BenignSAV:                                               K                                                         
gnomAD_SAV:    # D     #NLT  PPM RR#QE SFR     SA #I  VP#KNH #    IQM R  H E Q      SS  LSHV    PI   *  VRR  Y  K  
Conservation:  0031234222222321031378119193114226794256713591164226439396492720641149224307248683896640434157248218
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                         
SS_PSIPRED:      HHHHHHHHHHHHHHH        EE     EEE                  EEE                     EEE                    
SS_SPIDER3:      HHHHHHHHHHHHHH         EE     EEE    E  E          EEEE          H         EEE     H       H      
SS_PSSPRED:       HHHHHHHHHHHH          E       EE                  EEE           HHH       EEE            HHH     
DO_DISOPRED3:  BDDDDDDDDDDDDDDDD                                                                                   
DO_SPOTD:      DDDDDDDDDDDDDDD                                                                                     
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            QVLNLTQNSLLSLESRLFHSLPQLRELDLSSNNISHLPTSLGETWENLTILAVQQNQLQQLDRALLESMPSVRLLLLKDNLWKCNCHLLGLKLWLEKFVY 200
BenignSAV:                     V                                                                                   
gnomAD_SAV:     FFY  RD V   Q  V  F S P  RH   D  N  L   #     PNVFG K    **PEPE   YIRG KFSI#* SH*    YF S   CP  V  
Conservation:  3395862916024732351353193285693925107812333022466163433936335341385352253152543938395834357879893737
SS_PSIPRED:     EEE                     EEE                     EEE          HHH        EEE           HHHHHHHHHHH  
SS_SPIDER3:     EEEE    HE     HH       EEE       E             EEEE   EE E  H H        EEEE          HHHHHHHHHHHHH
SS_PSSPRED:     EEE       HHHHHH                                EEHHHHHHHHHHHHHHHH      EEEE         HHHHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:         N                                          N                                                     

                       10        20        30        40        50        60        70        80        90     
AA:            KGGLTDGIICESPDTWKGKDLLRIPHELYQPCPLPAPDPVSSQAQWPGSAHGVVLRPPENHNAGERELLECELKPKPRPANLRHAIATVIITGVVCGIVC 300
BenignSAV:                                                                     QL                           I      
gnomAD_SAV:    ##  # CTMR   EA   # F  SSR*   TYR  #   # LETL SS P S #PS L  #K#RKL* *Q*K R   #LV##H  TS     RI R T  
Conservation:  3991394529029414434574168564722731211111211010211120001221001112001111831847375468856468656676478465
STMI:                                                                                                  MMMMMMMMMMMM
SS_PSIPRED:            EE               HHH                                                          EEEEE      HHH
SS_SPIDER3:            E          E EH  HHH                                                           EEEEE     HHH
SS_PSSPRED:    H      EEE               HHH                                                     HHH   EEEEE    EEEH
DO_DISOPRED3:                                       DDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                  
DO_SPOTD:                                          DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                               
DO_IUPRED2A:                                          D  D       DD  DDDD       DDDD                               

                       10        20        30        40     
AA:            LMMLAAAIYGCTYAAITAQYHGGPLAQTNDPGKVEEKERFDSSPA 345
gnomAD_SAV:      T TV VC    V  I L   VS    SE  MG G GLSH P  
Conservation:  756747568785787448434231312102121023522121313
STMI:          MMMMMMMMM                                    
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHHH                         
SS_SPIDER3:    HHHHHHHHHHHHHHHHHHHH             HHHHH       
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHHHH                        
DO_DISOPRED3:                           DDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                             DDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                           DDDDDDDDDDDDDDDDDDDDD