Q9HC56  PCDH9_HUMAN

Gene name: PCDH9   Description: Protocadherin-9

Length: 1237    GTS: 8.996e-07   GTS percentile: 0.180     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


            gnomAD_SAV: 504      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAG 100
gnomAD_SAV:        E   SV   TY     S  L     VT    AS RV  TS   INF     I  G#R  HI       D M  A  N   #    ST       DD
Conservation:  4321122252333331222315568435343562455345555256644431112272423525656463762854552425645464326466534723
STMI:          SSSSSSSSSSSSSSSSSSSSSSS                                                                             
SS_PSIPRED:      HHHHHHHHHHHHHHHH HHHH                   HHHH                EEEEEE       EEE     EEEE      HHHH   
SS_SPIDER3:       HHHHHHHHHHHHHH  H  H  EEEEE        EE  HHHH                EEEEEE      EEEEE    EEEE       HHH   
SS_PSSPRED:      HHHHHHHHHHHHHHH  HHHHHHHH                                  EEEEEEE      EEEEE     EEE      HHHHHH 
DO_DISOPRED3:  BBDDDDDDDDDDDDDDDDDDDD                                                                              
DO_SPOTD:      DDDD DDDDDDDDDD                                                                                     
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                     N                                                    

                       10        20        30        40        50        60        70        80        90     
AA:            ASYAEENECFFELEVVILPNDFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYELLNGQSVFGLDIVETPEGEK 200
gnomAD_SAV:    #THV GS         F  S Y       VLI G    S I  A      L        H     EA A RS SS  N    IRKT L        V  R
Conservation:  2152152263664665686553857564632546478666695556566889865658657355453868391756435264476338486769768968
SS_PSIPRED:            EEEEEEEEE     EEEEEEEEEEE             EEEEEE                       EEEEEE      EEEEEEE     E
SS_SPIDER3:           EEEEEEEEEE      EEEEEEEEEE            EEEEEE        EEE             EEEEEE     EEEEEEEE     E
SS_PSSPRED:            EEEEEEEEEE    EEEEEEEEEEEEE           EEEEE                         EEEEE      EEEEEE       
DO_DISOPRED3:                                      D                                                               
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                              D               DDD     D     D                          
CARBOHYD:                                                     N                                                    

                       10        20        30        40        50        60        70        80        90     
AA:            WPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK 300
gnomAD_SAV:    R  M  HE   K       T  Q   R I     M     # G         RDS #   V  S SIDIFI     A G T      WF  R  IVH   
Conservation:  3988998419999479678986996999195799898997574949993879252337626796643859926839685949299362717737442156
SS_PSIPRED:    EEEEEE          EEEEEEEEEE       EEEEEEEEEE            EEEEEE        EEEEEEEE       EEEEEEE     HHHH
SS_SPIDER3:    EEEEEEE        EEEEEEEEEEE     EE EEEEEEEEEE       EEE EEEEEE        EEEEEE         EEEEEEE     HHHH
SS_PSSPRED:       EEE       HHHHEEEEEEEEE        EEEEEEEEEE           EEEEEE        EEEEEE         EEEEEEE     HHHH
DO_DISOPRED3:                                                DD                                                    
DO_SPOTD:                                                                                                          
DO_IUPRED2A:     DDDDD             DDDDDD      DDDDDDDD            DDDDDDDD  D      D D                            

                       10        20        30        40        50        60        70        80        90     
AA:            RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVI 400
gnomAD_SAV:      Y  K  #   I L  F    R#N         S   ST#VMF   II I     S      VG TSD M       L#A       A   A       
Conservation:  5492773368666664298962342976264979963376683637879979994938958895553977818897443699799786395955267573
SS_PSIPRED:    HHEEE     EEEE          EEEEEEEEE       EEEEEEEEE       EEEEEEE      EEEEE       EEEEEEEE        EEE
SS_SPIDER3:    HHEEE     EEEE E        EEEEEEEEE       EEEEEEEEE       EEEEEEEE      EEE        EEEEEEEE       EEEE
SS_PSSPRED:    HHHHH     EEEEE          EEEEEEEE       EEEEEEEEEE       EEEEEEE     EEE         EEEEEEEE        EEE
DO_DISOPRED3:                                                      D                                               
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                               D             DDDDDDD                                                   
CARBOHYD:           NN                                       N                    N                                

                       10        20        30        40        50        60        70        80        90     
AA:            CFIEREVPFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGK 500
gnomAD_SAV:      V      YFQV  G        YF     S      V    A   N  *N             R  CK   T        ##  H   VN A  N   
Conservation:  9766275986966775697979865399793444826474859494959847646356569899939593461534552899054338666593829472
SS_PSIPRED:    EEE     EEEEE    EEEEEE          EEEEEEEEEE       EEEEEEEEEE            EEEEEEE       EEEEEEEE      
SS_SPIDER3:    EEE     EEEEEEE  EEEEEE             EEEEEEE        EEEEEEEEE       EE   EEEEEEEEE     EEEEEEEE      
SS_PSSPRED:    EEE      EEEEEE  EEEEE            EEEEEEEE           EEEEEEEE           EEEEEEE        EEEEEE       
DO_DISOPRED3:                                                                 DDDDDDDD                             
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                         DDD            DDDDD              DDD         
CARBOHYD:                                                       N                                                  

                       10        20        30        40        50        60        70        80        90     
AA:            NADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD 600
gnomAD_SAV:       ## E  LSS    V Q         A      K L   L V    N      #V V IAQ    S#     K   Y L  K S CG       A   
Conservation:  8646283841542292682579586735366992353716763748591336447546264759499948299937769685989635798979968829
SS_PSIPRED:     EEEEEEE     EEEE     EEEEEE   HH EEEEEEEEEEE       EEEEEEEEEEE       EE                 EEEEEEEEE  
SS_SPIDER3:    EEEEEEEEE   EEEEE     EEEEEEE  H    EEEEEEEEEE     EE EEEEEEEEE       EEE                EEEEEEEEE  
SS_PSSPRED:      EEEEEE     EEE      EEEEEE   HHHHHHHEEEEEEEE        EEEEEEEEEE                          EEEEEEEE  
DO_DISOPRED3:                                                                                D D                   
DO_SPOTD:                                                                                                          
DO_IUPRED2A:    DD                                     DDDD      D    DDDDD                                        
CARBOHYD:                N                                                                                         

                       10        20        30        40        50        60        70        80        90     
AA:            AGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEV 700
gnomAD_SAV:      K  TMS  V  H#Y     TC     A I L GQ  N C   #E I   K LHF       SI             L  N     AF      M    
Conservation:  3959336466643133293786049796795798993858869174829393243462568996859688939455285492753674244365566328
SS_PSIPRED:        EEEEEEEE     EEE     EEEE EE  HHH  EEEEEEEEEE      EEEEEEEEEEE       EEE                   EEEEE
SS_SPIDER3:       EEEEEEEEE     EEEE    EEEEEEE  H H EEEEEEEEEEE  E  EEEEEEEEEEEE       EEE       EE         EEEEEE
SS_PSSPRED:        EEEEEEEE             EEEE          EEEEEEEEEE        EEEEEEEEE        E                   EEEEEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:         D                                  DDDDDDDDDDDDDDDDDDDDDDD                                    
CARBOHYD:                                   N                                                  N                   

                       10        20        30        40        50        60        70        80        90     
AA:            FAVDVDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGNASYIYDLIRRTMETPLDRNI 800
gnomAD_SAV:        I      Q   AL   S ED       I       N  R  G   H  ISV          M  F      N SV   CT GS H#A G    G  
Conservation:  2959274938745393533561649915521598866366311381897774746196949466442426557594742926262665442143522334
SS_PSIPRED:    EEEE      EEEEEEE        EEE     EEEE           EEEEEEEE         EEEEEEEEE        HHHHHHHHH         
SS_SPIDER3:    EEEE     EEEEEEEEEE      EEE      EEE       HHH  EEEEEEEE  E    EEEEEEEEEE         HHHHHHHH         
SS_PSSPRED:    EEEE      EEEEEEE          E      EEE          EEEEEEEEEE         EEEEEEEEE    HHHHHHHHHHHH         
DO_DISOPRED3:                                                                                        DDDDDDDDDDDDDD
DO_SPOTD:                                                                                  DDDDDDD        DDDDDDDDD
DO_IUPRED2A:                                                                                                  D DDD
CARBOHYD:                                       N                   N                    N    N                    

                       10        20        30        40        50        60        70        80        90     
AA:            GDSSQPYQNEDYLTIMIAIIAGAMVVIVVIFVTVLVRCRHASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI 900
gnomAD_SAV:    E  G      E  IF T F    I      LIAF L  C #        NR      PSS  I E     KRE  T   F  # L  K   TNNT R HV
Conservation:  2322121222664554494559545855455676649745264444466386549956976443725545545323555656657663536245222343
STMI:                        MMMMMMMMMMMMMMMMMMMMM                                                                 
SS_PSIPRED:            HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                                                    
SS_SPIDER3:           HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH       HH                                     EE              
SS_PSSPRED:           HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHH                  HHHHHH                           
DO_DISOPRED3:  DDDDD             DDDDDDDDD           DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDD                          DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDD                                            DDDDDDDDDDDDDDDDDDDDDDDDDDDD      DD        D DDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            NGTISLPAELEEQSIGRFDWGPAPPTTFKPNSPDLAKHYKSASPQPAFHLKPDTPVSVKKHHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQG 1000
gnomAD_SAV:           P     GTR#    LSL      K LHPT #   T  E #L       L MRN Q   A  S    F VFN    H P      #V   #   
Conservation:  4456455356564343453734376699952698983995746986696657789433599648869968999855755588466437456868666545
SS_PSIPRED:           HHH                        HHHHH                       EEEEE                         HHHH    
SS_SPIDER3:       E   HHH                        HHHH                       EEEEE E    EEE                         
SS_PSSPRED:                                    HHHH                                                                
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDD                   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDD  D       DDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD         D  DDD   DD  DDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            GFKTKGPLHTRQCNSHSKSDNIPVTPQKCPSSTGFHIQENEESHYESQRRVTFHLPDGSQESCSDSGLGDHEPVGSGTLISHPLPLVQPQDEFYDQASPD 1100
gnomAD_SAV:    V      S    #  #N   ISS  #H    FA YYV    #G CKLRSH M # #              Y LAA  A   Y   M KL #K D RV LN
Conservation:  4683354453542221101200111211110000001022222222233236436524535425424333141121222232244323246456523432
SS_PSIPRED:                                                     EEEEE     HH                            HHHHHH     
SS_SPIDER3:      E                                              EEEE                                     HHHH      
SS_PSSPRED:                                                                                              HHHHH     
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            KRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSDNCWMPPGLGPYQHPKSPLSTFAPQKEWVKKDKLVNGHTLTRAWKEDSNRNQFNDRKQYGS 1200
gnomAD_SAV:      N   D  N     #  LQR   P  T      F   P  W      SL   # P  # CT   AR   N PL  Y   T  NQE K  *SK H     
Conservation:  4555456455532222222132221222432344434435553353231122231212222212221022222222212311110211113101021221
SS_PSIPRED:                         HHHHHHHHHHHHHHH                                 HHH                      HHH   
SS_SPIDER3:                         HHHHHHHHHHHHHH       E                    HHHHHHHHHH         H                 
SS_PSSPRED:                         HHHHHHHHHHHHHHH                                 HHH                            
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDD                          DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDD                  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD    DDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30       
AA:            NEGHFNNGSHMTDIPLANLKSYKQAGGATESPKEHQL 1237
gnomAD_SAV:    S    I  R   H #R K  C   E  #A N  K  V
Conservation:  2223100212113323223122011012111112100
SS_PSIPRED:                EEE                      
SS_SPIDER3:               EE E                  E   
SS_PSSPRED:                                         
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDD