Q9HCL0  PCD18_HUMAN

Gene name: PCDH18   Description: Protocadherin-18

Length: 1135    GTS: 1.499e-06   GTS percentile: 0.447     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


            gnomAD_SAV: 567      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MHQMNAKMHFRFVFALLIVSFNHDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKLPNPSTVRFRAMQRGNSPLLVVNEDNGEISIGATIDREQLCQK 100
gnomAD_SAV:    VN I    R T   VFV#A   Q# RR      M    KF   T G T  M E S  R Y#PI Q * V KR  L  AA KN   MRV  RTNC E    
Conservation:  6100001001011105221211012152554844488624845454836663435244933233798563443335627372596677542699938933
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                         
SS_PSIPRED:         HHHHHHHHHHHHHHHHHHHHH    EE  HHH    EEEEEHHHHHHHHH          EEEE       EEE     EEEE     HHHHH  
SS_SPIDER3:         H HHHHHHHHHHHHHHHHH  E EEEE          EEE HHHHH HH           EEEEE      EEEE    EEEE     HHHHH  
SS_PSSPRED:           HHHHHHHHHHHHHHH       EE          EEEEEHHHHH              EEEEE      EEEE    EEE      HHHHHH 
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDD                                                                             
DO_SPOTD:      DDDDDDD                                                                                             
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            NLNCSIEFDVITLPTEHLQLFHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSANDFFNIEVRTRTDGAKYAELIV 200
gnomAD_SAV:         V       S DQ #V    AK  N  N F       V TV   N TAE # S     YT I   CFYACLH TS  V V  Q M E       TG
Conservation:  4469365899598986696965738665979974949564476578697867948459959296958685935969536239267755747857557958
SS_PSIPRED:        EEEEEEEE      EEEEEEEEEE          HH EEEEEE                        EEEE      EEEEEE      EEEEEEE
SS_SPIDER3:        EEEEEEEE      EEEEEEEEEE              EEEEEE      EEE              EEEE E    EEEEEEE     EEEEEEE
SS_PSSPRED:        EEEEEEEE     EEEEEEEEEEEEE             EEEEE                         EE       EEEEE      EHHHHHH
DO_DISOPRED3:                                  DD                                                              D   
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:        N                                                                                                 

                       10        20        30        40        50        60        70        80        90     
AA:            VRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIMETFKID 300
gnomAD_SAV:     KAV #     HK  P VL  E  RMP #          S    T     CVT      LI#     M  # R   TY  #  Y N    L T#  L #H
Conservation:  4569999234467947494929384758674778475999997939555583626396543845666899996969396674969749654472759466
SS_PSIPRED:    E         EEEEEEEEE       EEEEEEEEEEE            EEEEEEE       EEEE            EEEEEE     HHHHHH EE 
SS_SPIDER3:    E         EEEEEEEEE      EEEEEEEEEEEE            EEEEEE        EEEEEE         EEEEEE      HHHHHHEEE 
SS_PSSPRED:    H     HHHHHHHHHHHEE         EEEEEEEEEE          EEEEEEEEE     EEEEEEE          EEEEE      HHHHHHH   
DO_DISOPRED3:  D                                       DDDDDD DD                                                   
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                    D                                DD                                
CARBOHYD:                                                                          N                               

                       10        20        30        40        50        60        70        80        90     
AA:            SERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLMSPGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLH 400
gnomAD_SAV:      G        M   N     THA V Y VTS  S     #  I           VH IF    DLY T     T A           FE Y  TI   R
Conservation:  5639466634359692216876869899599986866986474549699859574655544446647464946536565956454929582996628684
SS_PSIPRED:        EEEEE         EEEEEEEEE           EEEEEEEE      EEEEEE                   EEEEEEEE        EEEEEE 
SS_SPIDER3:        EEEE E  E     EEEEEEEEEE       EEEEEEEEEEE       EEEEEE       EE         EEEEEE           EEEEE 
SS_PSSPRED:        EEEEE         EEEEEEEEEE         EEEEEEEEEE      EEEE                   EEEEEEEEEE       EEEEEE 
DO_DISOPRED3:                                                           DD                                         
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                         DD                                            

                       10        20        30        40        50        60        70        80        90     
AA:            GHGHFKLQKTYENNYLILTNATLDREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFVISENNSPGAYITTVTATDPDLGENGQV 500
gnomAD_SAV:     #     HM  D   ST   D  NT E  Q RW  VTK  R# NVFA  Y    T    G L Q    Q  L  AG   SR#  #  IDS      #R L
Conservation:  6684958545686884949637999948667486669994936658576686956295999493945348844449994995665641939695419758
SS_PSIPRED:        EEEEE     EEEEE           EEEEEEEEE      EEEEEEEEEEE            EEEEEEE       EEEEEEEE        EE
SS_SPIDER3:        EEEEE    EEEEEE     H    EEEEEEEEEE     EEEEEEEEEEEEE E         EEEEEEE       EEEEEEEE      EEEE
SS_PSSPRED:              HHHHHEEE            EEEEEEEEE         EEEEEEEEEE          EEEEEEE       EEEEEEE         EE
DO_DISOPRED3:                                                             DDDDDDDD                                 
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                    D                                  DDD             DDDDDD          
CARBOHYD:                         N                                                                                

                       10        20        30        40        50        60        70        80        90     
AA:            TYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVSQITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPALRNNTAEITIPKGAESGFHV 600
gnomAD_SAV:      IT  N    IALA *    L  V V    N #    # V   I TKEE#RLQ P  YS#A F TTND  SI  FT  T CSS#S V  H  # NS R 
Conservation:  6945572151445756678696959559998499697454439365859482216624957535665959992937219262826665254325416235
SS_PSIPRED:    EEEE       EE  EEEEE      EEE     HHHEEEEEEEEEEEE         EEEEEEEEE       EEE        EEEEE        EE
SS_SPIDER3:    EEEE E EE  EE EEEEEEE     EEEE      HEEEEEEEEEEEE         EEEEEEEEE       EEE        EEEEEE      EEE
SS_PSSPRED:    EEEEEE     EEEEEEEEE     HHHH     HHH   EEEEEEEEE         EEEEEEEEEEE                EEEE         EE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                                N                       N                 

                       10        20        30        40        50        60        70        80        90     
AA:            TRIRAIDRDSGVNAELSCAIVAGNEENIFIIDPRSCDIHTNVSMDSVPYTEWELSVIIQDKGNPQLHTKVLLKCMIFEYAESVTSTAMTSVSQASLDVSM 700
gnomAD_SAV:       # # SYF     F  S#E D KK V T   *P V    ARVHYASCIKR M  V   E  LK  A # V YV      L KR  T     P W I V
Conservation:  7244449496939674392632555333826544595623929410210102541537595922252656366424052130110211301322224163
STMI:                                                                                                             M
SS_PSIPRED:    EEEEEEE      EEEEEEE        EEE     EEEE          EEEEEEEEE       EEEEEEEEEEE                    HHH
SS_SPIDER3:    EEEEEE      EEEEEEEEEE     EEEE     EEEEE E       EEEEEEEEEE  E   EEEEEEEEEEE                    HHH
SS_PSSPRED:    EEEEEEE        EEEE                  EE           EEEEEEEEEE       HHHHHHHHHHH                   HHH
DO_DISOPRED3:                                                                    D               DDDDDDDDDDDD      
DO_SPOTD:                                                                                     DDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                              N                                                           

                       10        20        30        40        50        60        70        80        90     
AA:            IIIISLGAICAVLLVIMVLFATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSPSSSPTLERGQMGSRQSHNSHQ 800
gnomAD_SAV:       T    V TL  IVVA  TI   HK  A K#   M   T        AFWKV     I L P    MS I    LT P   I      SIQP QY  H
Conservation:  4595594578539637943543453577763469999688567648977968786957989888468699667864589437823687455556544878
STMI:          MMMMMMMMMMMMMMMMMMMM                                                                                
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHHHHHHHH                                   EE                                      
SS_SPIDER3:    HHHHHHHH    HHHHHHHHHHH                                     E  E                                    
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHHHHHHH                                                                            
DO_DISOPRED3:          DD DD DDD                DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                DD            DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                  D  DDDDDDDDD DDDDDDDDDDDDDD           DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            SLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLHQGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG 900
gnomAD_SAV:     P      L KRMAD LP QFIQS S A KF     V            *          T   L         H      E    *AQ   VG    A 
Conservation:  8989869689985497959874856869986686665988855886856858555566965856589999998968997999996749978966966866
SS_PSIPRED:     HHH                       HHHHHHHHHHH                            HH HHH                      HHHHHH
SS_SPIDER3:                      H       HHHHHHHHHH H                   H HH                                 HH HHH
SS_PSSPRED:                                HHHHHHH                     HHHHHHH                                     
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDD         DD DDDDDD     D D DDDDDDDDDD DDDDDD   D              DDDDDDDDDDDDDDDDDDDDDDDDD       

                       10        20        30        40        50        60        70        80        90     
AA:            FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPTQPQQQHPHQSLEDDAQPADSGEKKKSFSTFGKDSPNDEDTGDTS 1000
gnomAD_SAV:    CGEV         VV R   K     Q  H C  LP  S  N  G #   ##D  A A K    HI  EN  #  YDK R        E LKHDN   I 
Conservation:  8373422634247355565566548886658768542356488849575856775344232132211443022232322448856888601124223416
SS_PSIPRED:    HHHHHH      HHHHH                                                                EEE                
SS_SPIDER3:    H HHH       HHHH    H                       HEEE                                 EHE                
SS_PSSPRED:                HHHHH                                                                                   
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDD                    DDDDD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD    DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                               DDDDDDDDDD   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            TSSLLSEMSSVFQRLLPPSLDTYSECSEVDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTTNCGPPLGTHSSVQPSSKWLPAMEEIPENYEEDD 1100
gnomAD_SAV:          A TTL  H# SRFV A YKYN M # SY DH E #M  R AA#Q WIVS   NM    A I   LS ESQYI     RC  D         K  
Conservation:  4386846764575686843261426336121233363363254452125545565656554668933313111224122342356868899898858886
SS_PSIPRED:      HHHH   HHHHHH                    HH                HHH                              HHH         HH
SS_SPIDER3:      HHHH   HHHHHH                    H                 EE HH H                        HHHHH        HHH
SS_PSSPRED:       HHHHHHHHHHHH                                                                    HHHHHHHH         
DO_DISOPRED3:  DD               DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDBBBBB
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD               
DO_IUPRED2A:   DDDDDDDDD  D  D      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD D DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDD

                       10        20        30     
AA:            FDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS 1135
gnomAD_SAV:      KLV   SG N Q T S KV TD  Q     #  
Conservation:  47654444262335244455864898669366554
SS_PSIPRED:    HHHHHHHHH        HHHHHHHHHHHHHHHH  
SS_SPIDER3:    HHHHHHH          HHHHHHHHHHHHHHH   
SS_PSSPRED:      HHHH           HHHHHHHHHHHHHHHH  
DO_DISOPRED3:  BBBBBBBBBBDDDDDDDD DD     DD     DD
DO_SPOTD:                                       DD
DO_IUPRED2A:   DDDDDDDDDD DDD DD  DD