Q9NQV7  PRDM9_HUMAN

Gene name: PRDM9   Description: Histone-lysine N-methyltransferase PRDM9

Length: 894    GTS: 1.763e-06   GTS percentile: 0.564     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 6      gnomAD_SAV: 521      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MSPEKSQEESPEEDTERTERKPMVKDAFKDISIYFTKEEWAEMGDWEKTRYRNVKRNYNALITIGLRATRPAFMCHRRQAIKLQVDDTEDSDEEWTPRQQ 100
gnomAD_SAV:    #  # FR GG    I   *W S  T       MF   # *S V YL # LCKHM #DC  P  T V TSQ  L# Y*S* T  R  GPKVYN D IRK  
Conservation:  0000000000000000000000000000000000000000000000000000000000000000000000000310002001011222345334000000
SS_PSIPRED:                            EEEEEEEEEEE HHHHHH  HHHHHHHHHHHHHHHHHHH        HHHH                     HHH 
SS_SPIDER3:                           EEEEEEEEEEEE HHHHHH  HHHHHHHHHHHHHHHHHHH       HHHHH  HHHHH              HHH 
SS_PSSPRED:                              HHHHHHEE  HHHHHH  HHHHHHHHHHHHHHHHHHHH      HHHHHHHHH H                   
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDD                                                           DDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDD                                                         DDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDD                                                     DDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            VKPPWMALRVEQRKHQKGMPKASFSNESSLKELSRTANLLNASGSEQAQKPVSPSGEASTSGQHSRLKLELRKKETERKMYSLRERKGHAYKEVSEPQDD 200
gnomAD_SAV:    L LH*#VSKL EC     L  #    *A  N   S  H* T  V   #*  M  AE  NIF#  * Q PK K T  A   *R #   C    KIGKQ #E
Conservation:  0211022121221101210110100000011011110001010001001101001011111110010122001110000100211100001010122112
SS_PSIPRED:           HHHHHHHHH          HHHHHHHH HHHHH     HH                    HHHHHHHH HHHHHHH                 
SS_SPIDER3:           H HHHHH            HHHHHHHHHHHH                              H HHHH HHHHHH        E          
SS_PSSPRED:           HHHHHHHHH          HHHHHHHHHHHHHH                                   HHHHHHHH H               
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD       
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDD DDDDDDDDDDDDDD     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD    DDDDDDDDDDDDDDDDD      

                       10        20        30        40        50        60        70        80        90     
AA:            DYLYCEMCQNFFIDSCAAHGPPTFVKDSAVDKGHPNRSALSLPPGLRIGPSGIPQAGLGVWNEASDLPLGLHFGPYEGRITEDEEAANNGYSWLITKGRN 300
gnomAD_SAV:     * N  LY*T  T  S SR ASSC   N   NRR TSA#F  S          S  E    S    ML      SFK *V   *V D S   * VI R  
Conservation:  2121430420141214123312133121020031113311455144232132320342241411012324223532342231131211212231413221
SS_PSIPRED:         HHHHHH           EEE                     EE                                   HHHHH    EEEE    
SS_SPIDER3:         HHHHHHH  H       EEE                     EE            E        E  E      E   HHHHH   EEEEE    
SS_PSSPRED:         HHHHHHHHHH        E                                  EE                     HHHHHHH    EEE     
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                          DDDDDDDD  DDDDDDDDDDDD                                                       
BINDING:                                                                                                 Y         
METAL:             C  C       C  H                                                                                 
REGION:                                                               AGL                             NNGYSWL      

                       10        20        30        40        50        60        70        80        90     
AA:            CYEYVDGKDKSWANWMRYVNCARDDEEQNLVAFQYHRQIFYRTCRVIRPGCELLVWYGDEYGQELGIKWGSKWKKELMAGREPKPEIHPCPSCCLAFSSQ 400
BenignSAV:                                       H                                                                 
gnomAD_SAV:    YH#   ER    PKG  #   TQNE    M D      V CGP Q    A     *     SH   #  R      F  EGKRRLD PLR   S V L H
Conservation:  0113452112112322255112211131333222122123323222402324422322223111221012102011100010000112251030123201
SS_PSIPRED:      EE       HHHH  EEEEEE   HHHHHH      EEEE   EE    EEEEEEE                                          
SS_SPIDER3:       E        E EEEEEEEEEE     HHH       EEEEEEEE   EEEEEEE      E   E       E                        
SS_PSSPRED:       E       HHHHHHHHEE   HHHHHHHHHHHHHHHHEEEEEEE   EEE                  HHHHH                   HHH  
DO_DISOPRED3:                                                                       DDDDDDDDDDDDD DDDD      D      
DO_SPOTD:                                                                          DDDDDDDDDDDDDDDDDDD            D
DO_IUPRED2A:                                                                                                       
BINDING:                                                               Y                                           
METAL:                                                                                                  C  C       
ZN_FING:                                                                                              HPCPSCCLAFSSQ
REGION:                           NC                                                                               
MODRES_M:                                                                         K   K K                          

                       10        20        30        40        50        60        70        80        90     
AA:            KFLSQHVERNHSSQNFPGPSARKLLQPENPCPGDQNQEQQYPDPHSRNDKTKGQEIKERSKLLNKRTWQREISRAFSSPPKGQMGSCRVGKRIMEEESRT 500
gnomAD_SAV:     Y R QIKH    PHV #LA#  F *S    #RNR  GH H NT  C       DS  KF RF  GIR  K            V C#     VR  D IR
Conservation:  0120132200300101111101000021001201110101001000011011011110111100110000000011101122211111101200011100
SS_PSIPRED:          EEE                            EE                           HH                           EE   
SS_SPIDER3:          E        E                     E       EE      E           E     E                E   E       
SS_PSSPRED:       HHHHH                                                                                     EEE    
DO_DISOPRED3:                              DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDD DDDDD
DO_SPOTD:      DDDDDDDDDDDDDDD   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD        
DO_IUPRED2A:          DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD     DDDDDDD  DDDDDDDDDDDDDDDDDDDDDD
METAL:              H    H                                                                                         
ZN_FING:       KFLSQHVERNH                                                                                         

                       10        20        30        40        50        60        70        80        90     
AA:            GQKVNPGNTGKLFVGVGISRIAKVKYGECGQGFSVKSDVITHQRTHTGEKLYVCRECGRGFSWKSHLLIHQRIHTGEKPYVCRECGRGFSWQSVLLTHQR 600
BenignSAV:                                                                         N                               
gnomAD_SAV:     *EM   S#R  L WI         C   ER  #A AN L  RGA I  NP* G GS Q  N   Q  SL SVDIR*    YW    # I K*IF I   
Conservation:  0000000000000000000000000211232121011121121122222334071163336100107018022613343409100000000000000000
SS_PSIPRED:          HH            EEEEE                                                                           
SS_SPIDER3:          HH      EEEEEEEEEEEE           HHHH          E   HH                      E                    
SS_PSSPRED:                     EEEEEEEE                                      E   HHH                     E        
DO_DISOPRED3:   DDDD                                     D    DDD                   DD    DDD                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   DDDDDDDDDD                             DD                                                           
ZN_FING:                              VKYGECGQGFSVKSDVITHQRTH     YVCRECGRGFSWKSHLLIHQRIH     YVCRECGRGFSWQSVLLTHQR

                       10        20        30        40        50        60        70        80        90     
AA:            THTGEKPYVCRECGRGFSRQSVLLTHQRRHTGEKPYVCRECGRGFSRQSVLLTHQRRHTGEKPYVCRECGRGFSWQSVLLTHQRTHTGEKPYVCRECGRG 700
BenignSAV:                                                                                     S                   
gnomAD_SAV:    IQK    C GG     C Q *LR  # KI   *  F     RW   Q L# H      #          RW    KPD         AK L         
Conservation:  0000000000000000000000000000000000000000000061001051173216222243091284428201206106322121121011214330
SS_PSIPRED:                   EEE                 EE                                                              E
SS_SPIDER3:    E      E       EEEE                EE      EE      E    E      E                    E      EE      E
SS_PSSPRED:                           HHH                         HHH                                              
DO_DISOPRED3:                                                                                    D                 
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                           D                          DD                                               
ZN_FING:       TH     YVCRECGRGFSRQSVLLTHQRRH     YVCRECGRGFSRQSVLLTHQRRH     YVCRECGRGFSWQSVLLTHQRTH     YVCRECGRG

                       10        20        30        40        50        60        70        80        90     
AA:            FSWQSVLLTHQRTHTGEKPYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTG 800
BenignSAV:                                                                                            E H          
gnomAD_SAV:      RK  H IQ KR             QS RDT*#  S KTR   *    G D  WVLSG  DH T # R KE*  C      Q L  E HV GQ*    A
Conservation:  5100103114113223224305115132310110610823464534540612432261001120151225353443040122213201114003212313
SS_PSIPRED:    EE                                             EE             HHH                           EE      
SS_SPIDER3:    EEE    E           E       EE         E        E       E      HH           EE              HH       
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                      DDDD                        DDDD                        DDDD     
METAL:                              C  C            H   H       C  C            H   H       C  C            H   H  
ZN_FING:       FSWQSVLLTHQRTH     YVCRECGRGFSNKSHLLRHQRTH     YVCRECGRGFRDKSHLLRHQRTH     YVCRECGRGFRDKSNLLSHQRTH  

                       10        20        30        40        50        60        70        80        90    
AA:            EKPYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRNKSHLLRHQRTHTGEKPYVCRECGRGFSDRSSLCYHQRTHTGEKPYVCREDE 894
BenignSAV:                  R                                                                                
gnomAD_SAV:    D         WDLRDQ DF S   AY  KR CI* *  QS LD PN FSP*SRRIWA SFFF#D #Q#I#HKLRH  L*  QKEQ A*I   YD
Conservation:  1223140131123100000000000000000000000000000000000000000000000000000000000000000000000000000000
SS_PSIPRED:       EE             HHHH                                                                        
SS_SPIDER3:       EE      E       H  E        E   HH             E E      E   H   HH                  E      
SS_PSSPRED:                       HHH                                                                        
DO_DISOPRED3:                                                    D                  DDDD   DDDDDDDDDDDDD     
DO_SPOTD:                                                                                                   D
DO_IUPRED2A:                      DDDD                        DDDD                                           
METAL:              C  C            H   H                                                                    
ZN_FING:          YVCRECGRGFSNKSHLLRHQRTH     YVCRECGRGFRNKSHLLRHQRTH     YVCRECGRGFSDRSSLCYHQRTH