Q9NRJ7  PCDBG_HUMAN

Gene name: PCDHB16   Description: Protocadherin beta-16

Length: 776    GTS: 2.322e-06   GTS percentile: 0.759     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 5      gnomAD_SAV: 530      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MEIGWMHNRRQRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARIISQGNKQHLQLKAQTGDLLINEKLDREELCGPTE 100
BenignSAV:                                                                                               E         
gnomAD_SAV:    V   R NS#     V  SA  NFCRV D ##FH  M  M#K CSMT P RG A # I IT #  # VFR K    * E#    M  SK  E#K P #   
Conservation:  0100000010067511223120010200010062417711222252441134432012510622341221110161520043262404247672593024
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                        
SS_PSIPRED:        HH    HHHHHHHHHHHHHHHH         HHH    EEEEHHHHH    HHHHHH  EEEEE   EEEEEE      EEE     HHHHH    
SS_SPIDER3:              HHHHHHHHHHH HHH     EEE  EHE    EEEE HHHH    HHHHHH   EEEE   EEEEEE      EEE     HHH      
SS_PSSPRED:             HHHHHHHHHHHHHH             EE    EEEHHHHHHH   HHHHH   EEEEE     EEEE      EEE     HHHH     
DO_DISOPRED3:  BBBBBBBBBBBBBBDDDDDDDDDDDDD                                                                         
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDD D                                                                             
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            PCILHFQVLMENPLEIFQAELRVIDINDHSPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDGRKYPELVLDKEL 200
gnomAD_SAV:    T  RQLLL TK T    LTQ   # T H F #   R  VQ TQ KCS#V       T E E     A YCTS   F# W  MLK   R   H P   EQ 
Conservation:  4833286545229334311250417398428191213315463932125116251072928260635218151131262413100123122536452217
SS_PSIPRED:     EEEEEEEEE    EEEEEEEEEE             EEEE         EEE               EEEE     EEEEEEE     EEEEHHH    
SS_SPIDER3:     EEEEEEEEE    EEEEEEEEEEE           E EEEE        EEE     E         EEE      EEEEEEE     EEE EEE    
SS_PSSPRED:      EEEEEEEEE   EEEEEEEEEEEE           EEEEEE        E                  E      EEEEEEE       HHHH     
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                       D   D           D                                          DDDD 

                       10        20        30        40        50        60        70        80        90     
AA:            DREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKVQIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGE 300
gnomAD_SAV:    EQ GGALR  NP V NC C Q#  A   ##    NSN TLG   #VC  ETAD  R    I   PT# S   TSA M * H  HL G    S  YLV R 
Conservation:  7272113316362729562624343305161428368737281201613232941112304314270819251351419153312112022614310382
SS_PSIPRED:          EEEEEEEEE        EEEEEEEEEE            EEEEE         EEEEEEEE        EEEEEEE   HHHHH EEE     E
SS_SPIDER3:          EEEEEEEEEE     EEEEEEEEEEEEE       E   EEEEEE        EEEEEEEE        EEEEEEE    HH   EEE     E
SS_PSSPRED:     HHHHHHHHHHHHHH         EEEEEEEEEE            EEEE         EEEEEEEE       EEEEEEEE    HHH          E
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:         DDDDDDDDDDDDDDDDDD DDDDDD            D DDDD            D              D            DDDDDDD    

                       10        20        30        40        50        60        70        80        90     
AA:            VRLRKQVDFEMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSPEIVVAVFSVSDPDSGNNGKTISSIQEDLPFLLKPSVKNF 400
BenignSAV:                                                   L                                                     
gnomAD_SAV:    LQ   KI# # AR  DG # PAY#R    Q ##   M  GKGDS HL  T   RA L  *  TA    CD#  ETR SA KM  LE HILV P  AFE L
Conservation:  4041005669020150314261833342433240415273767163423323120627611322435534082634153231334222366153221244
SS_PSIPRED:    EEEE         EEEEEEEEEE     EEEEEEEEEEE      EEEEEE            EEEEEEEE        EEEEE      EEEEE     
SS_SPIDER3:    EEEE         EEEEEEEEEE     EEEEEEEEEEE      EEEEEE           EEEEEEEE          EEEE      EE       E
SS_PSSPRED:    EEEE         EEEEEEEEEE      EEEEEEEEEE       EEEEE           EEEEEEEEE         EEEE            HHHH
DO_DISOPRED3:                                              D  D   D                                                
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                               DDDDDDDDDDD           DD        DDDDDD                  

                       10        20        30        40        50        60        70        80        90     
AA:            YTLVTERALDREARAEYNITLTVTDMGTPRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPL 500
gnomAD_SAV:    H     K R T EKP  T I  I VTR       ##VKMHV   SYK   C    CI #L Q   STQ TRNIN K #N CS  R N*L   S N Y S 
Conservation:  5262320277660112535442317362622222113151416466426161212213141423123203112130213131220211110210100001
SS_PSIPRED:    EEEE              EEEEEEE      EEEEEEEEEEE            EEEEEEE       EEEEEEEE        EEEEEE          
SS_SPIDER3:    EEEEE      H      EEEEEEE        EEEEEEEEE          E EEEEEEE      EEEEEEEEE     EEEEEEEEE          
SS_PSSPRED:    HHHHH    HHHHHHHH EEEEEE          EEEEEEEEE           EEEEEEEE       EEEEE         EEEEEE           
DO_DISOPRED3:                                               DDD                                                    
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                      D     D D D DDDDDDDDD DDDD          D             DDDDDDD  D    DDDDDDD          
CARBOHYD:                       N                 N                                                                

                       10        20        30        40        50        60        70        80        90     
AA:            ASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
BenignSAV:            T                Q      G                                                                    
gnomAD_SAV:    #F   FST YD   VP  M  *T       #    H# T     V   LV PNTK KLL L *S RSS    A    QTSQT C  N      R LD S 
Conservation:  0002111101211212113413122131213121223221212111312141313442211112211111211112110112102311224050414033
SS_PSIPRED:    EEEEEEE     EEEEE   HHHH EEEEEEEEE         EEEEEEEEE                                EEEEEEEEE    HHH
SS_SPIDER3:    E EEEEE     EEEEE   HHHHH  EEEEEEEE        EEEEEEEEE       EEE          EEE         EEEEEEEEE     HH
SS_PSSPRED:    EEEEEEE    HHHHHHHHHHHHHHHHHEEEEEE         EEEEEEEEE                                EEEEEEEEE    HHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:    D                                                                      DD                          
CARBOHYD:                                                                        N                                 

                       10        20        30        40        50        60        70        80        90     
AA:            WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQPFLPLPEAAPGQTQANSLTVYLVVALASVSSL 700
gnomAD_SAV:    S  C      D  P S #V #  GGITS  R*LGSV H  MM  NVKDQ#RC  A M QM  #NSL K Y LFA ED #HI  DLF  F L SSVL    
Conservation:  1222131221111110201013221111112131102312112424132111121113031213122131201100000010110131102011110010
STMI:                                                                                                    MMMMMMMMMM
SS_PSIPRED:    HHHHEE        EEEE     EEE     HHH    EEEEEEEE       EEEEEEEEEE                       HHHHHHHHHHHHHH
SS_SPIDER3:    HHHHHEH      EEEEE     EEEEE        H  EEEEEEE  E   EEEEEEEEEEE                      HHHHHHHHHHHHHHH
SS_PSSPRED:    HHHHHHHH       EEEE   EEEHHH   HHHHHHHHEEEEEEE      HHHEEEEEEEE                       HHHHHHHHHHHHHH
DO_DISOPRED3:                                                                               DDDDDD                 
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70      
AA:            FLFSVLLFVAVRLCRRSRAASVGRCSMPEGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPIIPNFSP 776
gnomAD_SAV:       L# Q LVLL   S ST W RCFWV  DRL  H   I  IAAQ R   *  #PR D  I     MR   HI  H
Conservation:  2111211211212111010000000111111212212221111120202112211021011120011111110000
STMI:          MMMMMMMMMMM                                                                 
SS_PSIPRED:    HHHHHHHHHHHHHHHHH                               EE EEEE        EEE          
SS_SPIDER3:    HHHHHHHHHHHHH  H HHH               E        E   EEEEEEE       EEE           
SS_PSSPRED:    HHHHHHHHHHHHHH                     EEE             EEE                      
DO_DISOPRED3:                                                                           DDD
DO_SPOTD:                                                                              DDDD
DO_IUPRED2A: