Q9NVE5  UBP40_HUMAN

Gene name: USP40   Description: Ubiquitin carboxyl-terminal hydrolase 40

Length: 1235    GTS: 2.205e-06   GTS percentile: 0.724     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 3      gnomAD_SAV: 622      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MFGDLFEEEYSTVSNNQYGKGKKLKTKALEPPAPREFTNLSGIRNQGGTCYLNSLLQTLHFTPEFREALFSLGPEELGLFEDKDKPDAKVRIIPLQLQRL 100
gnomAD_SAV:     SRV   K  P    # H E   V IT    S S    S  *   R ES   S V *     L       Y  S        R   N  DQ FA  S C 
Conservation:  7895896551212312112231113011146645940228797498889999879888955898687398485338991736223345458588879965
SS_PSIPRED:                                              EE     HHHHHHHHHHH  HHHHHHHHH  HHH                HHHHHHHH
SS_SPIDER3:                                        H   E EE   H HHHHHHHHHH   HHHHHHHH    HH           HHH  HHHHHHHH
SS_PSSPRED:                                           EEEE      HHHHHHHHHHH  HHHHHHHHH                    HHHHHHHHH
DO_DISOPRED3:  BBBDDDDDDDDDDDDDDDDDDDDDDDDD                                                 DDDDDDDDDDD            
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                            DDDDDDDDD             
DO_IUPRED2A:                        DDDDD  DDDD  DDDDDDD                                                           
ACT_SITE:                                                       C                                                  

                       10        20        30        40        50        60        70        80        90     
AA:            FAQLLLLDQEAASTADLTDSFGWTSNEEMRQHDVQELNRILFSALETSLVGTSGHDLIYRLYHGTIVNQIVCKECKNVSERQEDFLDLTVAVKNVSGLED 200
gnomAD_SAV:      L       #T   Y IV  R ARS    E  AR   *N#  TS  CVIR  RRGF CS  RAIT K    N R  I KG  YC GVRIG   LCS  N
Conservation:  8538853652557923894999944284349799999897996998399479566368249998455736184692549545566887743635426844
SS_PSIPRED:    HHHHHH        HHHHHH     HHHHHHHHHHHHHHHHHHHHHHH     HHHHHHHH  EEEEEEEEE     EE  EEEEEEEEEEE     HHH
SS_SPIDER3:    HHHHH        HHHHHHH      HHHHHHHHHHHHHHHHHHHHHH      HHHHHHH  EEEEEEEEE     E   EEEEEEEEEEE     HHH
SS_PSSPRED:    HHHHHH       HHHHHHHH     HHHHHHHHHHHHHHHHHHHHHHH    HHHHHHHHH EEEEEEEEE                EEEEE    HHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            ALWNMYVEEEVFDCDNLYHCGTCDRLVKAAKSAKLRKLPPFLTVSLLRFNFDFVKCERYKETSCYTFPLRINLKPFCEQSELDDLEYIYDLFSVIIHKGG 300
gnomAD_SAV:        TF Q     G #WH R  SG       L   C        L    H   L  K#CR*  *SA   #    L   E G   S CM YR         
Conservation:  5754576778297149993941933771847586626996969499999789426489686543429923346597684121363432859686878686
SS_PSIPRED:    HHHHHH   EEE     EE      EEEHHHHHHH      EEEEE  EEE      EEEE   EE   EE               EEEEEEEEEEEE  
SS_SPIDER3:    HHHHH E EEE      EE      EEEEEEEEEE      EEEEE EEEE     EEEEE EEEE    E               EEEEEEEEEEE   
SS_PSSPRED:    HHHHH   EEEE            HHHHHHHHHHHHH    EEEEE  EEE HHHHHHHH                         HHHEEEEEEEEEE  
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            CYGGHYHVYIKDVDHLGNWQFQEEKSKPDVNLKDLQSEEEIDHPLMILKAILLEENNLIPVDQLGQKLLKKIGISWNKKYRKQHGPLRKFLQLHSQIFLL 400
gnomAD_SAV:    RFR  CR         E RPC# K   AE                 # Q V    T V T  H SL #F  TRMFCK *  EHR Q W   L#Y  L  P
Conservation:  9898899656584736829322332011210111110011034641362155342221424546685452233247663766258452877425543934
SS_PSIPRED:       EEEEEEEEE      EEE          HHHH        HHHHHHHHHHHHH    HHHHHHHHHHHH     HHHHHHH HHHHHHHH   EEEE
SS_SPIDER3:       EEEEEEEEE     EEEE H        HHHH        HHHHHHHHH H       HHHHHHHHHHH     HHHHHH  HHHHHHHH   EEEE
SS_PSSPRED:        EEEEEEE                    HHH         HHHHHHHHHHHHH      HHHHHHHHHH      HHHHHH HHHHHHHHHHHHHH 
DO_DISOPRED3:                             DDDDDDDDDDDDDDDDDD                    D D        D                       
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                  DDD                                                                  
ACT_SITE:          H                                                                                               

                       10        20        30        40        50        60        70        80        90     
AA:            SSDESTVRLLKNSSLQAESDFQRNDQQIFKMLPPESPGLNNSISCPHWFDINDSKVQPIREKDIEQQFQGKESAYMLFYRKSQLQRPPEARANPRYGVPC 500
gnomAD_SAV:    G G#  AC  T G FR   G R H **T Q  L          # LQ* N#DG E   V  N        E #D LF CW   S TS K L     A  R
Conservation:  2243228372110101001010100000011011110000111132588758963935816257358869798999999963271881382275272680
SS_PSIPRED:                             HHHHH                 EEE    EEEE  HHHHHHHH    EEEEEEEE       HHHH        H
SS_SPIDER3:          EEEE           HH HHHH                   EEEE    EE   HHHHHHH     EEEEEEE        HHHH        H
SS_PSSPRED:                            HHHH                   EEE          HHHHHHHH     EE E          HHH         H
DO_DISOPRED3:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                           
DO_SPOTD:                  DDDDDDDDDDDDDDDDDDDDDDDDDD D                                                            
DO_IUPRED2A:                            DDD DDDDD                         D DDD                        DDD   D     

                       10        20        30        40        50        60        70        80        90     
AA:            HLLNEMDAANIELQTKRAECDSANNTFELHLHLGPQYHFFNGALHPVVSQTESVWDLTFDKRKTLGDLRQSIFQLLEFWEGDMVLSVAKLVPAGLHIYQS 600
gnomAD_SAV:      V   V   #        YN TSS LDF# YQ HH    S   # I # I TM H   G  E SRAFQK M       D #VI  I   # TE Q  H 
Conservation:  3751342247126512925373215234558854429221497854211013323244484856665673445535427686447536505879985522
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHHHHHHH  EEEEEEE  EEEEE   EE        EEEEEEE    HHHHHHHHHHHHHH    EEEEEEEE   EEEEEEE
SS_SPIDER3:    HHHHHHHHHHHHHHHHHHHHHH    EEEEEE    EEEE  EEEE      EEEEEEEEE   HHHHHHHHHHHHHH    EEEEEEE    EEEEEEE
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHHHHHH  EEEEEE    EEEE              EEEEEEE    HHHHHHHHHHHHHH    EEEEEEE    EEEEEE 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                DD                                                                                     

                       10        20        30        40        50        60        70        80        90     
AA:            LGGDELTLCETEIADGEDIFVWNGVEVGGVHIQTGIDCEPLLLNVLHLDTSSDGEKCCQVIESPHVFPANAEVGTVLTALAIPAGVIFINSAGCPGGEGW 700
BenignSAV:                                                                      A                                  
gnomAD_SAV:    F R Q  #S    V     SL TRMK  RIYS A   S SV   A  V IRN E  #  AT    F     K C  FKT T  V  T  S   Y   # *
Conservation:  6144223712355055356989692783820523804358565555431011121112232322245533415225314541215344111221131129
SS_PSIPRED:           EEEE       EEEE  EEE  EE      EEEEEEEEEE          EEEEE          HHHHHHHH      EEEE          
SS_SPIDER3:    E    EEEEE EE    EEEEE  EEE  EE       EEEEEEEEEEE       EEEEEE         EHHHHHHH      EEEEE         E
SS_PSSPRED:           EEE        EEEE  EEE  EEEE      EEEEEEE             EEE         HHHHHHHHH     EEEEE          
DO_DISOPRED3:                                                    DDDDDDDDDD DD                                 D  D
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                      D

                       10        20        30        40        50        60        70        80        90     
AA:            TAIPKEDMRKTFREQGLRNGSSILIQDSHDDNSLLTKEEKWVTSMNEIDWLHVKNLCQLESEEKQVKISATVNTMVFDIRIKAIKELKLMKELADNSCLR 800
gnomAD_SAV:    M   RG  # M# K    SE  V   YC A  R VNRA     GVS*F   #  D  P         T#  I   E  T* EV  *I             
Conservation:  1332124314844224726343566423112132321142112121312654622121031312034625513544246613752462525321112977
SS_PSIPRED:    EE  HHHH   HHH       EEEEE              EE  HHH EEEEEE           EEEE      HHHHHHHHHHHH   HHH    EEE
SS_SPIDER3:    E   HHHHHHHHHH       EEEEEE                 HHHEEEHEEE          EEEEE  HHHHHHHHHHHHHHH H  HHH     E 
SS_PSSPRED:    EE  HHHHHHHHHHH      EEEEE                  HHHHHHHHH           EEEEE    HHHHHHHHHHHHHHHHHHHHHH     
DO_DISOPRED3:   DDDD D      D     DD    DDDDDDDDDDDDD                                                              
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   D   DD    D                        DD                                                               

                       10        20        30        40        50        60        70        80        90     
AA:            PIDRNGKLLCPVPDSYTLKEAELKMGSSLGLCLGKAPSSSQLFLFFAMGSDVQPGTEMEIVVEETISVRDCLKLMLKKSGLQGDAWHLRKMDWCYEAGEP 900
gnomAD_SAV:             G  LN N        V      Y ANGS L#  IVY  V#  I  R  V   IGK V  S R   I    C K  G*RS* T  RC     
Conservation:  5232286683973722653554552544717727247234756847236221114164554583616644772165223452720998664787364755
SS_PSIPRED:    EE               HHHH      EEEE         EEEEEEEE         EEEEEE    HHHHHHHHHHH       EEEEE          
SS_SPIDER3:    EE     E        EHHHH      EEEEEE       EEEEEEEEE        EEEEEE    HHHHHHHHHHHH      EEEEE          
SS_PSSPRED:                     HHHHHH     EEE         EEEEEEEE        EEEEEEE    HHHHHHHHHHHH      EEEE           
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            LCEEDATLKELLICSGDTLLLIEGQLPPLGFLKVPIWWYQLQGPSGHWESHQDQTNCTSSWGRVWRATSSQGASGNEPAQVSLLYLGDIEISEDATLAEL 1000
gnomAD_SAV:    F      V  H  YF   WV   E   SVSVP  S #C    V#L  **N  A#A YI#     *  A #H  PEDK VH     FVVR L   VM V P
Conservation:  7136443924425229767563782863395855256440100002101000121101100112322232131210000110312381445325527145
SS_PSIPRED:      HH   HHHH      EEEEE        EEEEEEEEEE                                         EEEEEE EEE     HHHH
SS_SPIDER3:      HHH EHHHH      EEEEE       EEEEEEEEEE                        EEEE               EEEEEEEEE    EHHHH
SS_PSSPRED:      HHHHHHHHHH     EEEEE        EEEEEEEEE                                          EEEEE  EEE    HHHHH
DO_DISOPRED3:                                               DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                       
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                    D DD              D   D                            

                       10        20        30        40        50        60        70        80        90     
AA:            KSQAMTLPPFLEFGVPSPAHLRAWTVERKRPGRLLRTDRQPLREYKLGRRIEICLEPLQKGENLGPQDVLLRTQVRIPGERTYAPALDLVWNAAQGGTAG 1100
BenignSAV:                             M                                                                           
gnomAD_SAV:    M *     S R  SIL   #   #M DK C  S S   QERP      WKS NS   V   K  SR  M P S LS L    CT T   A# T#ECR  S
Conservation:  7264438402111134222558562462335246980211284347521423574718125827642556834444484441621216458543253531
SS_PSIPRED:    HHHHH  HHHHH     HHHHHHHHHH              HHH      EEEEEEE           EEEEEEEE          EEEEEE      HH
SS_SPIDER3:    HHHH   HHHHH     HHHHEHHHHH     EEEE    EHHHE E   EEEEEEE    EE    EEEEEEEEE      E   EEEEEE      HH
SS_PSSPRED:    HHHHHH HHH       HHHHHHHHHH             HHHHH      EEEEE           EEEEEEEE             EEEE      HH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            SLRQRVADFYRLPVEKIEIAKYFPEKFEWLPISSWNQQITKRKKKKKQDYLQGAPYYLKDGDTIGVKNLLIDDDDDFSTIRDDTGKEKQKQRALGRRKSQ 1200
BenignSAV:               C                                                                                         
gnomAD_SAV:      K I #Y CSP M #M TVT#  VR KL L C * *H S S  EER    HE L H   RN #  TT  V N#N  I #  N R A   *QG       
Conservation:  4942267115474362545994355543933434836526666585513485339546588845758776472235826115412432332120123231
SS_PSIPRED:    HHHHHHHHHH   HHHEEEEE     EEEEE     HHHHH        HH           EEEEEE           HHHHHHHHHHHHHHHHHHHHH
SS_SPIDER3:    HHHHHHHHH    HHHEEEEEE   EEEEEE                        EEEE   EEEEEEE              HHHHHHHHHH     HH
SS_PSSPRED:    HHHHHHHHHH   HHHHHHHH     EEEEE     HHHHHHHHHHHHHHHH         EEEEEE                HHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                       DDDDDDDDDDDD                              DDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                          DDDDDDDDDDDD                         DDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                D                                 DDDDDDDDDDDDDDDDDDDD 

                       10        20        30     
AA:            EALHEQSSYILSSAETPARPRAPETSLSIHVGSFR 1235
gnomAD_SAV:    A   #*N  VVC  DM  L QTR*A V   M   *
Conservation:  11012211100100202142442523554364243
SS_PSIPRED:    HHHHHH                    EEEE     
SS_SPIDER3:    HHHHH                      EEE     
SS_PSSPRED:    HHHHHHH                  EEEEE     
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDD   D       
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDD       DDDD
DO_IUPRED2A:         D DDDDDDDDDD DDDDDDDDDDD