Q9NWW5  CLN6_HUMAN

Gene name: CLN6   Description: Ceroid-lipofuscinosis neuronal protein 6

Length: 311    GTS: 2.847e-06   GTS percentile: 0.878     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 27      BenignSAV: 8      gnomAD_SAV: 179      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MEATRRRQHLGATGGPGAQLGASFLQARHGSVSADEAARTAPFHLDLWFYFTLQNWVLDFGRPIAMLVFPLEWFPLNKPSVGDYFHMAYNVITPFLLLKL 100
PathogenicSAV: V    T                     K                  F              H    P         K      N     K          
BenignSAV:                T         S       A   T                                     Q                            
gnomAD_SAV:     G MW  * V V D  DV  DT     K # L TN#PVLM LI  #   *  P        C V LVILLRK CS #  TA GCL V C IVMS#   R 
Conservation:  2222222222220000000022222222012110111012215435863243445444655655444248446695538545645644645359667855
STMI:                                                                 MMMMMMMMMMMMMMMMMMMMM    MMMMMMMMMMMMMMMMMMMM
SS_PSIPRED:       HH            HH  HHHHHH        HHHH     HHHHHHHHHHHHHHH    EEEEEEE          HHHHHHHHHHHHHHHHHHHH
SS_SPIDER3:         HHH             HHHHHH      HHHH      EEEHHHHHHHHHHHHH    EEEEEE HHH       HHHHHHHHHH HHHHHHHHH
SS_PSSPRED:     HHHHHHH               HHH                 HHHHHHHHHHHHHHHH   HHHHEEE             HHHHHHHHHHHHHHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                 
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                             
DO_IUPRED2A:       DDDDD  D                                                                                        

                       10        20        30        40        50        60        70        80        90     
AA:            IERSPRTLPRSITYVSIIIFIMGASIHLVGDSVNHRLLFSGYQHHLSVRENPIIKNLKPETLIDSFELLYYYDEYLGHCMWYIPFFLILFMYFSGCFTAS 200
PathogenicSAV:   QF                  D                         #         L         P                S              
gnomAD_SAV:    V QYLC V C  MDMTS #IMV  G         YH   I #R     C    V     KM  Y    PCC           V   F#F    IS VS  
Conservation:  4674433461333444533436744347544744468555854345555556444262723556445443536313742364485655433653466310
STMI:          M         MMMMMMMMMMMMMMMMMMMMM                                               MMMMMMMMMMMMMMMMMMMMM 
SS_PSIPRED:    HHH         EEEEEEEEEE    HHH   HHHHHH         HH   HHH   HHHH  HHHHHHHHH       HHHHHHHHHHHHHH     H
SS_SPIDER3:    HH         EEEEEEEEEE    E EE   H HEEH             HHHH   HHHH   HHHHHH          HHHHHHHHHHH H      
SS_PSSPRED:    HHH        EEEEEEEEEE    EEE                                     HHHHHHHHH    EEEHHHHHHHHHHHHH      
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            KAESLIPGPALLLVAPSGLYYWYLVTEGQIFILFIFTFFAMLALVLHQKRKRLFLDSNGLFLFSSFALTLLLVALWVAWLWNDPVLRKKYPGVIYVPEPW 300
PathogenicSAV:                     #            L   T  T          H      S                                     T LR
BenignSAV:                                                             G         T                                 
gnomAD_SAV:    E       T  P M   D  SR   PK R    L V## T# V I # TC CV V#GSS     F T P  FLV   T   TE    N  L#   IT LR
Conservation:  1211125124338326533557765684654266456355624334353343414636726542561334264236623873824673456434658574
STMI:             MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM              MMMMMMMMMMMMMMMMMMMMM                    
SS_PSIPRED:    HHHH     HHH     HH HHHHH HHHHHHHHHHHHHHHHHHHHHHH          HHHHHHHHHHHHHHHHHHHHHH  HHHHHH   EEEE    
SS_SPIDER3:            HHHH        EEEEEE  HHHHHHHHHHHHHHHHHHHHHH      H HHHHHHHHHHHHHHHHHHHHHH   HHHHH    EEEEE   
SS_PSSPRED:               EE      EEEEEEE  HHHHHHHHHHHHHHHHHHHHHH         HHHHHHHHHHHHHHHHHHHHHH  HHHHH    EEE     
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10 
AA:            AFYTLHVSSRH 311
BenignSAV:            T   
gnomAD_SAV:        F ITGQ 
Conservation:  53647431101
SS_PSIPRED:    EEEEHH     
SS_SPIDER3:    EEEEEE     
SS_PSSPRED:    EEEEEEE    
DO_DISOPRED3:            D
DO_SPOTD:              DDD
DO_IUPRED2A: