Q9NXB0  MKS1_HUMAN

Gene name: MKS1   Description: Meckel syndrome type 1 protein

Length: 559    GTS: 2.431e-06   GTS percentile: 0.789     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 9      BenignSAV: 4      gnomAD_SAV: 300      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MAETVWSTDTGEAVYRSRDPVRNLRLRVHLQRITSSNFLHYQPAAELGKDLIDLATFRPQPTASGHRPEEDEEEEIVIGWQEKLFSQFEVDLYQNETACQ 100
PathogenicSAV:                   Y                                                            C                    
BenignSAV:                                           F                                                             
gnomAD_SAV:    TV S   I NR T      L C S FLA  R NI  S  YF   S   RNFT  V   L  A N  H  KEK  DTM V  G    EC  A       G 
Conservation:  6221022121223333322321333264232334211131132212121214340350101112100000010011011221221125734753433395
SS_PSIPRED:         EE    EEEEEE      EEEEEEEEE                     HHH                 EEEEEE       HHHHHHH       
SS_SPIDER3:        EEE     EEEEE      EEEEEEEEEE                    HHH                 EEEEEE       HHHHHHHH      
SS_PSSPRED:                EEEEE      EEEEEEEEEE           HHH      HHH                  EEEHHHHHHH  HHHHHHH       
DO_DISOPRED3:  DDDDDD                                  D    DDDDDDDDDDDDDDDDDDDDDDDDD                              
DO_SPOTD:      DD                                          DDDDDDD    DDDDDDDDDDDDDDDD                             
DO_IUPRED2A:    DD                                                      DDDDDDDDDDDDDDDDD                          

                       10        20        30        40        50        60        70        80        90     
AA:            SPLDYQYRQEILKLENSGGKKNRRIFTYTDSDRYTNLEEHCQRMTTAASEVPSFLVERMANVRRRRQDRRGMEGGILKSRIVTWEPSEEFVRNNHVINTP 200
BenignSAV:                           Q                                                                             
gnomAD_SAV:    T S SR H  V N D L  #  QQ S CA    C D D  # I N     AH*S DG*TTD  CHQ   *    #    CVII K   GII KD I    
Conservation:  4887279426622311232636186988783764642442222333211207548748864454855643124211243536474963683543644553
SS_PSIPRED:     HHHHHHHHHHHHHHH       EEEEEE       HHHHHH           HHHHHHHHHHHHH           HHH       HHHHHH       
SS_SPIDER3:      HHHHHHHHHHHHHH       EEEEE        HHHHH            HHHHHHHHHHHHH              EEE    HHHHHH       
SS_PSSPRED:     HHHHHHHHHHHHHHHH      EEEEEE       HHHHHHH          HHHHHHHHHHHHH                     HHHHHHH      
DO_DISOPRED3:                                             D          D DD   DDDDDDBDDDDDDDD                        
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                         D DD          D DD DD                     DDD  D                        D     

                       10        20        30        40        50        60        70        80        90     
AA:            LQTMHIMADLGPYKKLGYKKYEHVLCTLKVDSNGVITVKPDFTGLKGPYRIETEGEKQELWKYTIDNVSPHAQPEEEERERRVFKDLYGRHKEYLSSLVG 300
BenignSAV:                                                                                          G              
gnomAD_SAV:       V M     TCE   S    Y        T CA  G H  S  R     K# RKR#  R  M NS   NT LK   W WQ  QG   Q E     FI 
Conservation:  4688479776770328915139268236648449754589886325448653235564739263535471041166336942465897278575825879
SS_PSIPRED:     EEEEEEEE            EEEEEEEEE    EEEEE         EEEEE    EEEEEEEEE       HHHHHHHHHHHHHHHHHHHHHHHHH  
SS_SPIDER3:     EEEEEEE              EEEEEEEE    EEEEE         EEEEE   E EEEEEEEEE       HHHHHHHHH HHHHHH HHHHH    
SS_PSSPRED:      EEEEEEE             EEEEEEEEE   EEEEE         EEEEE     EEEEEEEE       HHHHHHHHHHHHHHHHHHHHHHHHH  
DO_DISOPRED3:                                                                               DDBDDD                 
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                   D                     DDDDDDD DDD D                 

                       10        20        30        40        50        60        70        80        90     
AA:            TDFEMTVPGALRLFVNGEVVSAQGYEYDNLYVHFFVELPTAHWSSPAFQQLSGVTQTCTTKSLAMDKVAHFSYPFTFEAFFLHEDESSDALPEWPVLYCE 400
PathogenicSAV:                 E                                E                                                  
gnomAD_SAV:     N  IA    HW  #  DII   D G V   I   #K     S*       LE A I IA   P # M QL  RIMS  V FR    # T L      F 
Conservation:  3799442373774346897599457555476748447991219544114148557747255115142463954774483351142322413428956864
SS_PSIPRED:             EEEEEEEEEEEEEE      EEEEEEEE          HHEEEEEEEEEEEE      EEEEE  EEEEEEEE             EEEEE
SS_SPIDER3:       E     EEEEEEEEEEEEEE      EEEEEEEE          H  E  EE EEEEE      EEEEE  EEEEEEE              EEEEE
SS_PSSPRED:       E     EEEEEEEEEEEEEE      EEEEEEEE                    EE         EEEE   EEEEEE              EEEEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            VLSLDFWQRYRVEGYGAVVLPATPGSHTLTVSTWRPVELGTVAELRRFFIGGSLELEDLSYVRIPGSFKGERLSRFGLRTETTGTVTFRLHCLQQSRAFM 500
PathogenicSAV:   L                 S                                         G                            W    K   
BenignSAV:                                                      T                                                  
gnomAD_SAV:    I L E R* CP   C      TI R YS   PM     PSMG    K LT S  QV   FC W      WQL  C V CI IPS   LL  WM  Y   V
Conservation:  9574849385959998333482179081344269773328426576889596559796166344734636146574553545462433253545465494
SS_PSIPRED:    EEEE     EEEEEEEEEE       EEEEEEEEEE    HHHHHHHHHH    EEE  EEEE         EEEE EEEEEEEEEEEEEEEEEE HHHH
SS_SPIDER3:    EEEE     EEEEEEEEEE       EEEEEEEEEE    HHHHHHHHHH    EE  H EEE        EE  E E EE  EEEEEEEEEEE   HH 
SS_PSSPRED:    EEE      EEEEEEEEEE       EEEEEEEEE     HHHHHHHHHH     E    EEE           EE EEEEEEEEEEEEEEEEE  HHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        6
AA:            ESSSLQKRMRSVLDRLEGFSQQSSIHNVLEAFRRARRRMQEARESLPQDLVSPSGTLVS 559
gnomAD_SAV:    *L     KV# M  H  E N   C  S  DG CQ QCLV   W # #      C   L 
Conservation:  62311333434314343323442331323333143514311431143122202211000
SS_PSIPRED:      HHHHHHHHHHHHHH    HHHHHHHHHHHHHHHHHHHHHHHH               
SS_SPIDER3:     H HHHHHHHHHHHH      HHHHHHHHHHHHHHHHHHHHHHH               
SS_PSSPRED:    H  HHHHHHHHHHHHH   HHHHHHHHHHHHHHHHHHHHHHHHHH              
DO_DISOPRED3:    DDDDDDDDDDDDDDD                           DDDDDDDDDDDDDDD
DO_SPOTD:                                                     DDDDDDDDDDDD
DO_IUPRED2A:                                             DDDDD