Q9NZC9  SMAL1_HUMAN

Gene name: SMARCAL1   Description: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1

Length: 954    GTS: 1.638e-06   GTS percentile: 0.509     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 14      BenignSAV: 13      gnomAD_SAV: 463      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MSLPLTEEQRKKIEENRQKALARRAEKLLAEQHQRTSSGTSIAGNPFQAKQGPSQNFPRESCKPVSHGVIFKQQNLSSSSNADQRPHDSHSFQAKGIWKK 100
BenignSAV:                          G                    T                                                         
gnomAD_SAV:    LF   S   #  TK  * Q   C         RH   L   VT        S FE   ##    M RS    LR      D    L    #      RR 
Conservation:  1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
SS_PSIPRED:          HHHHHHHHHHHHHHHHHHHHHHHHHHH              HH                                                   
SS_SPIDER3:          HHHHHHHHHHHHHHHHHHHHHHHHHH                                    E                               
SS_PSSPRED:          HHHHHHHHHHHHHHHHHHHHHHHHHH                                                                    
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
REGION:         SLPLTEEQRKKIEENRQKALARRAEKLLA                                                                      

                       10        20        30        40        50        60        70        80        90     
AA:            PEEMPTACPGHSPRSQMALTGISPPLAQSPPEVPKQQLLSYELGQGHAQASPEIRFTPFANPTHKPLAKPKSSQETPAHSSGQPPRDAKLEAKTAKASPS 200
BenignSAV:                  H                                                                                      
gnomAD_SAV:        L   S    C   GPI N S  PE          F CK R  Y *S L   LI I  QN  S  R#Q C  IQ    EHLSSN #  T RS V  L
Conservation:  1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
SS_PSIPRED:                                      HHH                                                  HHHHHH       
SS_SPIDER3:                                      HHHH  H                                              HHHHH        
SS_PSSPRED:                                       HHHH                                                 HHHH        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:                 S          S     S                     S                                              S  

                       10        20        30        40        50        60        70        80        90     
AA:            GQNISYIHSSSESVTPRTEGRLQQKSGSSVQKGVNSQKGKCVRNGDRFQVLIGYNAELIAVFKTLPSKNYDPDTKTWNFSMNDYSALMKAAQSLPTVNLQ 300
BenignSAV:           F                                                                                             
gnomAD_SAV:     KY F MR # AI MSSAK I # N R     A#KCK RN I  SN#        V* T EL  M G     E  M SST# GCRS  TTV   LM    
Conservation:  1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
SS_PSIPRED:         HH                          EEEEEEEEEEE  EEEEEE   HHHHHHHHH                HHHHHHHHHHHH        
SS_SPIDER3:        HH                           EEEEEEEEEEE  EEEEEE   HHHHHHHH             EE  H  HHHHHHHH         
SS_PSSPRED:                                       EEEEEEEE   EEEEE   HHHHHHHHHH           EEEE   HHHHHHHHHHH       
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                              DDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                    
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                               D                           

                       10        20        30        40        50        60        70        80        90     
AA:            PLEWAYGSSESPSTSSEGQAGLPSAPSLSFVKGRCMLISRAYFEADISYSQDLIALFKQMDSRRYDVKTRKWSFLLEEHSKLIAKVRCLPQVQLDPLPTT 400
PathogenicSAV:                                                                                                 P   
BenignSAV:     A             R                                                             Q                       
gnomAD_SAV:    A  C   #NK AF R K  VDH PS PV*    Q         K       # TVFI #V  T     SS     SQG    NE  C#         LM 
Conservation:  1111111111111111111111111111111111111111111111111111111111211111111111111101011001010100111111111111
SS_PSIPRED:                                 EEEEEEEEE   EEEE     HHHHHHHHH            EEEEHHHHHHHHHHHH           HH
SS_SPIDER3:       H                        EEEEEEEEEEE HEEEEE    HHHHHHHH      EE    EEEEEHHHHHHHHHHHH           HH
SS_PSSPRED:                                  EEEEEEE    EEEEE   HHHHHHHHHHHHHHHH      EE  HHHHHHHHHHHHH          HH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                        
DO_SPOTD:            DDDDDDDDDDDDDDD                                                                               
DO_IUPRED2A:            DD D DDDDDD                                                                                

                       10        20        30        40        50        60        70        80        90     
AA:            LTLAFASQLKKTSLSLTPDVPEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRW 500
PathogenicSAV:                                                                    P                                
BenignSAV:                   G        V                                                                            
gnomAD_SAV:       E T   #    G MSAAA  V        MF    L*  # S  V R  C   TE    E IV    VT   QRDRL  L   F MHI   P   Q 
Conservation:  0101201000111000001001123107511310264455215505461327554455476666645554543263288858764996566492654249
SS_PSIPRED:    HHHHHHHHHHH          HHHHHH  HHHHHH HHHHHHHHHHHHH    EEEE      HHHHHHHHHHHHHH   EEEEE   HHHHHHHHHHHH
SS_SPIDER3:    HHHHHHHHHH           HHHHH   HHHHHHHHHHHHHHHHHHHH    EEEE      HHHHHHHHHHHH     EEEEEEHH HHHHHHHHHH 
SS_PSSPRED:    HHHHHHHHHHHHHH               HHHHHHHHHHHHHHHHHHHHH   EEEEE    HHHHHHHHHHHHHH    EEEEE    HHHHHHHHHHH
DO_DISOPRED3:                   D                                                                                  
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
NP_BIND:                                                                DDMGLGKT                                   

                       10        20        30        40        50        60        70        80        90     
AA:            LPSLSPDCINVVVTGKDRLTAGLINIVSFDLLSKLEKQLKTPFKVVIIDESHFLKNSRTARCRAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPT 600
PathogenicSAV:                                                N                              L      W              
BenignSAV:                M                                                                                        
gnomAD_SAV:     Q  R G  SIL   R H  T     G    F R K EV N   AL V    I    S SC Q VT#   I R  F     AT  W P   M T T R  
Conservation:  6656141152552442313113363747768743212230014265548857567523527433445444160855997999956883886365145171
SS_PSIPRED:         HHEEEEE           EEEE HHHHHHHHHHH     EEEEE HHH   HHHHHHHHHHHHHHH  EEEE         HHHHHHHHHHH   
SS_SPIDER3:          EEEEEE           EEEE HHHHHHHHHHH     EEEEEHHHH   HHHHHHHHHHHHH H  EEEEE        HHHHHHHHHHH   
SS_PSSPRED:          EEEEEE    EE     EEEE HHHHHHHHHHHH    EEEEE       HHHHHHHHHHHHHHH  EEEEE        HHHHHHHHHHH   
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
MOTIF:                                                         DESH                                                

                       10        20        30        40        50        60        70        80        90     
AA:            FFPQFHAFGLRYCDAKRMPWGWDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRKIVVIAPGRINARTRAALDAAAKEMTTKDKTKQQQKDALIL 700
PathogenicSAV:                                            WC #                                                     
BenignSAV:                                                     NI                                                  
gnomAD_SAV:      LRV T   H YE  WLA##RGC*      #   P    D  WH E NI#    GRKH  A  SS L SP#IKV  G T  K I   N  R    T  P
Conservation:  1631412541469464110488664666580696239221674875714863679394642524132132222222421342142000111111123642
SS_PSIPRED:        HHHHHHHH                 HHHHHHHHHHHHHHHHHHHHHHH     EEEEEE    HHHHHHHHHHHHHHHHHH     HHHHHHHHHH
SS_SPIDER3:    H   HHHHHHHH               HHHHHHHHHHHHHHHHHHHHHHHHH     EEEEEEE   HHHHHHHHHHHHHHHHH    HHHHHHHHHHHH
SS_PSSPRED:        HHHHHHHH                HHHHHHHHHHHHHHHHHHHHHHHH  HHHHEEEEEE   HHHHHHHHHHHHHHHHHHH    HHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                  DDDDDDDDDD           

                       10        20        30        40        50        60        70        80        90     
AA:            FFNRTAEAKIPSVIEYILDLLESGREKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTFSSADLVV 800
PathogenicSAV:     I                                                          Q                                    
BenignSAV:                                              M                                                          
gnomAD_SAV:      SGI     L  TDC  #     K T VI   RN    #V#     #YM   HSNS     KQ     RL  L   D  #    D  V  # FL N # 
Conservation:  4722853573345259624554242288968589414632421351221302556782444236214332651111004548653655476584663466
SS_PSIPRED:    HHHHHHH  HHHHHHHHHHHHHH   EEEEEHHHHHHHHHHHHHHHH    EEEE     HHHHHHHHHHHHH    EEEEEEEE            EEE
SS_SPIDER3:    HHHH  H  HHHHHHHHHHHHH    EEEEE   HHHHHHHHHHHHH    EEEEE    HHHHHHHHHHHH     EEEEEEE        E E  EEE
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHHHHHH   EEEEEE HHHHHHHHHHHHHHH   EEEE     HHHHHHHHHHHH     EEEEEE              EEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                          D                                            

                       10        20        30        40        50        60        70        80        90     
AA:            FAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKVLAEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQKSFEKEGSDMELL 900
PathogenicSAV:                E   H                                    E                                           
gnomAD_SAV:    VT     A       EHL        M  # VL  D    C  HQ E*TL I   TR P  SL  #I    H  E     QV Y#C   SDR    TK P
Conservation:  7577596995439999979968822473797679447392369366427217742693341433213121151133114317124522101101031112
SS_PSIPRED:    EE     HHHHHHHHHHHHH      EEEEEEEE   HHHHHHHHHHHHHHHHHHH             HHHHH  HHHHHHHHHHHHHH     HHHHH
SS_SPIDER3:    E      HHHHHHHHHHHHH      EEEEEEE    HHHHHHHHHHHHHHHHHHH      HHHHH    H    H HHHHHHHHHHH       HHHH
SS_PSSPRED:    EE     HHHHHHHHHHHH        EEEEEEE   HHHHHHHHHHHHHHHHHHH                     HHHHHHHHHHHHH     HHHHH
DO_DISOPRED3:                                                           DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                DDDDDDDDDDDDDDDDDDDDDDDDDDD   DDDDDDDDDDDD
DO_IUPRED2A:                                                                        D                              

                       10        20        30        40        50    
AA:            EAAESFDPGSASGTSGSSSQNMGDTLDESSLTASPQKKRRFEFFDNWDSFTSPL 954
gnomAD_SAV:    V      S   L ACA  F KTR     NP  T   R  #       NT  FS 
Conservation:  223331213300101101111033121100000110352133212002431222
SS_PSIPRED:    HHHHH                                   HH    HHH     
SS_SPIDER3:    HHHH                                   HHHH           
SS_PSSPRED:    HHHHH                              HHHH H             
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD