Q9P2E7  PCD10_HUMAN

Gene name: PCDH10   Description: Protocadherin-10

Length: 1040    GTS: 1.678e-06   GTS percentile: 0.527     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 2      gnomAD_SAV: 521      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MIVLLLFALLWMVEGVFSQLHYTVQEEQEHGTFVGNIAEDLGLDITKLSARGFQTVPNSRTPYLDLNLETGVLYVNEKIDREQICKQSPSCVLHLEVFLE 100
gnomAD_SAV:     T Q    SFCVM    T  R      E#YC L R  TVE   G#   L   L M     IL    KRD EM  L K                  GI   
Conservation:  9212123412222244129544254682439534565656654528535575552441454846336463935252245796348543227384765665
STMI:          SSSSSSSSSSSSSSSSSS                                                                                  
SS_PSIPRED:     HHHHHHHHHHHHHHHHHH     HHHH   EEEEHHHHH    HHHHHH  EEE        EEEE    EEEE     HHHHH      EEEEEEEE 
SS_SPIDER3:    HHHHHHHHHH   HH H   E E  HH     EE  HHHH    HHHH     EEE      EEEEE    EEEE  E  HHHH       EEEEEEEE 
SS_PSSPRED:    HHHHHHHHHHHHHHHH        HHH     EEHHHHHHH   HHHHHH    E        EEEE    EEEE     HHHHH     EEEEEEEEEE
DO_DISOPRED3:  DDDDDDDDDDDDDD                                                                                      
DO_SPOTD:      DDDDDDDDDDD                                                                                         
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            NPLELFQVEIEVLDINDNPPSFPEPDLTVEISESATPGTRFPLESAFDPDVGTNSLRDYEITPNSYFSLDVQTQGDGNRFAELVLEKPLDREQQAVHRYV 200
gnomAD_SAV:    K V      M    V   SS  #  N R K     A  S   V         I   S  K  SSN    G#HA ENS                 VMY H 
Conservation:  4978666665853636685816444742667677646868796649375999475942745627349168568644856588566245888846526556
SS_PSIPRED:       EEEEEEEEEE             EEEEEE                    HHH  EEE      EEEEEE      EEEEEEE          EEEEE
SS_SPIDER3:        EEEEEEEEE             EEEEEEE      EEE               EEE      EEEEEEE     EEEEEEE          EEEEE
SS_PSSPRED:       EEEEEEEEEEE            EEEEEE                                   EEEE        HHHHHH     HHHHHHHHHH
DO_DISOPRED3:               D DDDD                               D                              D   D              
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                   DDDDDDDDDDDDDDDDDDDD DDDDDDDDDDD   DDDD  D        DD   D     D DDDDDDD         D D D

                       10        20        30        40        50        60        70        80        90     
AA:            LTAVDGGGGGGVGEGGGGGGGAGLPPQQQRTGTALLTIRVLDSNDNVPAFDQPVYTVSLPENSPPGTLVIQLNATDPDEGQNGEVVYSFSSHISPRAREL 300
gnomAD_SAV:          RSRREG #E#ESDR# # LLK   #  P  I Q       M   E      P     LSA V    #   A K ESSDIMF  R Y  S TW R
Conservation:  7452333333333333333385333515469767994768999999693825468554829646296667896969198818967596766644334665
SS_PSIPRED:    EEEE                           EEEEEEEEEE            EEEEE         EEEEEE          EEEEEE     HHHHHH
SS_SPIDER3:    EEEEE                       EEEEEEEEEEEEE            EEEEEE       EEEEEEE          EEEEE      HHHHHH
SS_PSSPRED:    HHEEE                           EEEEEEEEEE           EEEEEEE       EEEEEE          EEEEE      HHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                 DDDDDDDDDDD                                                                              
DO_IUPRED2A:   D     DDDDDDDDDDDDDDDDDDDDDDDD DDDDD D            DDDDDDDDD D    DDDDDDDDDDD   DDDDDDDDDD           
CARBOHYD:                                                                              N                           

                       10        20        30        40        50        60        70        80        90     
AA:            FGLSPRTGRLEVSGELDYEESPVYQVYVQAKDLGPNAVPAHCKVLVRVLDANDNAPEISFSTVKEAVSEGAAPGTVVALFSVTDRDSEENGQVQCELLGD 400
gnomAD_SAV:    LR #ASA *  I# #MECDDI  C  *       LS              S   T  V  C M K# R S #   M VI R #         MH   M Y
Conservation:  8244295884971665979763349558977969798766988856351829884868399984759692433899697799486974588333696464
SS_PSIPRED:    H       EEEEE         EEEEEEEEE         EEEEEEEEE       EEEEEE             EEEEEEEE        EEEEEE   
SS_SPIDER3:    HEE     EEEEEEE       EEEEEEEEEE        EEEEEEEEE        EEEEE             EEEEEEEEE    H  EEEEEE   
SS_PSSPRED:    H       EEEEE          EEEEEEEEE        EEEEEEEEEEE     EEEEEE            EEEEEEE           EEEE    
DO_DISOPRED3:                                                        DDDDDDDDDD                                    
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   D  DD      DDDD                                            D  D                  D        DDD       

                       10        20        30        40        50        60        70        80        90     
AA:            VPFRLKSSFKNYYTIVTEAPLDREAGDSYTLTVVARDRGEPALSTSKSIQVQVSDVNDNAPRFSQPVYDVYVTENNVPGAYIYAVSATDRDEGANAQLAY 500
BenignSAV:                                F                                                                        
gnomAD_SAV:       H MP    DHS  AKTSV      YH   L #W   QLT TIG  M#L            T SF # # S S    TF   AIS  L K S D  V 
Conservation:  6994994665997866956297990354845473845180958467697385869698858352422648594999999979488692839161971539
SS_PSIPRED:      EEEEE     EEEEE          EEEEEEEEEE       EEEEEEEEEE            EEEEEEE       EEEEEEEE        EEEE
SS_SPIDER3:      EEEEE    EEEEEE          EEEEEEEEEE  E    EEEEEEEEEEEE          EEEEEE        EEEEEEE        EEEEE
SS_PSSPRED:       EEE      EEEEE           EEEEEEEEE          EEEEEEEE            EEEEEE      EEEEEEE       HHHHHHH
DO_DISOPRED3:                                                           DDD                                        
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                  D                                                                    

                       10        20        30        40        50        60        70        80        90     
AA:            SILECQIQGMSVFTYVSINSENGYLYALRSFDYEQLKDFSFQVEARDAGSPQALAGNATVNILIVDQNDNAPAIVAPLPGRNGTPAREVLPRSAEPGYLL 600
gnomAD_SAV:     VP F T D  L PD  MS    C  #  FL C  Q YLNV   S# S    E    SA   ITL    IG  MLE I ESHR  G  # S #   S   
Conservation:  4836428669971689979276857898866855365363915263917231561374673535667666493546733636653747179747667665
SS_PSIPRED:    EE       EE EEEEEEE     EEE     HHHHEEEEEEEEEE          EEEEEEEEE       EE            EEE         EE
SS_SPIDER3:    EEEE EE  EE EEEEEEE     EEEE    H HHHE EEEEEEEE         EEEEEEEEE       EEE          EEEE E      EEE
SS_PSSPRED:    HHH      EEE EEEEEE     EEE     HHHHHH EEEEEEEE         EEEEEEEEEE                               EEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                            DDDDDD  D  DDDDDDDD        
CARBOHYD:                                                              N                                           

                       10        20        30        40        50        60        70        80        90     
AA:            TRVAAVDADDGENARLTYSIVRGNEMNLFRMDWRTGELRTARRVPAKRDPQRPYELVIEVRDHGQPPLSSTATLVVQLVDGAVEPQGGGGSGGGGSGEHQ 700
gnomAD_SAV:     S V L V G K T  A  T  D   K LSV    RD  I  * #TM  L W  G   #M  Q     F AGS  L   #  E S D D   SR LE   
Conservation:  3642529565679977776532766136777999567577494411462112054755779767577554553517167952132133333333304210
SS_PSIPRED:    EEEEEEE      EEEEEEEE        EE      EEE EE          EEEEEEEEE      EEEEEEEEEEE                     
SS_SPIDER3:    EEEEEE      EEEEEEEEE       EEE      EEEE E          EEEEEEEEE  E   EEEEEEEEEEEE                    
SS_PSSPRED:    EEEEEEE         EEE                 HHH               EEEEEEEE        EEEEEEEEE                     
DO_DISOPRED3:                                                                                    DDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                                        DDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                   D                      DDDDDDDD D     DDDDDD                         DDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            RPSRSGGGETSLDLTLILIIALGSVSFIFLLAMIVLAVRCQKEKKLNIYTCLASDCCLCCCCCGGGGSTCCGRQARARKKKLSKSDIMLVQSSNVPSNPA 800
gnomAD_SAV:     #I P DV    HFNF F   F  M S    VV L V# Y  VN    C S  R  SF    #D  C PR    DQEC   F        R  SI   LV
Conservation:  2224233362485778676797774766768579699669796775342597245661442143333336655246366997797995777534421234
STMI:                         MMMMMMMMMMMMMMMMMMMMM                                                                
SS_PSIPRED:                   HHHHHHHHHHHHHHHHHHHHHHHHHHH                           HHHHHHHH                       
SS_SPIDER3:                   HHHHHHHHHHHHHHHHHHHHHHHH          E                      HHHHHHH       HH            
SS_PSSPRED:                 HHHHHHHHHHHHHHHHHHHHHHHHHHH                                 HHHHHHH        EE          
DO_DISOPRED3:  DDDDDDDD                 D                                      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDD      DDDDDDDDDDDD       DD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD            
DO_IUPRED2A:   DDDDDDD                                                                                           D 

                       10        20        30        40        50        60        70        80        90     
AA:            QVPIEESGGFGSHHHNQNYCYQVCLTPESAKTDLMFLKPCSPSRSTDTEHNPCGAIVTGYTDQQPDIISNGSILSNETKHQRAELSYLVDRPRRVNSSAF 900
BenignSAV:        T                                                                                                
gnomAD_SAV:    R# TG  RDVS#  #SH  R      S  SR   L    YN LQIM N NK WRT  SC S#L   #     V  SKA Y Q    #    SHQ  R   
Conservation:  6374443449533442555779767466563647587675645542657434476323442475977677644744737359379453545965547759
SS_PSIPRED:                     EEEEEEE         EEEE                                                               
SS_SPIDER3:       E              EEEEEE         EEEE                                                 H            H
SS_PSSPRED:         E                E           EE                                                                
DO_DISOPRED3:  DDDDDDDDDDDDDDDDD  D D               DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD   DDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDD                                              DD          DDDDDDDDDD     DDDDDDDD    D   DDD

                       10        20        30        40        50        60        70        80        90     
AA:            QEADIVSSKDSGHGDSEQGDSDHDATNRAQSAGMDLFSNCTEECKALGHSDRCWMPSFVPSDGRQAADYRSNLHVPGMDSVPDTEVFETPEAQPGAERSF 1000
gnomAD_SAV:       #                       #VRAS  GV FS         Q  W   T I    AC V  CHG    LR N    NKAC    #HR E #  
Conservation:  5444447797977799999979994757343573779799757977999999975769443747773999977779779747549212110025722258
SS_PSIPRED:                         HHHHHHHHHH          HHHHH                          EEE                         
SS_SPIDER3:                         HHHHHHHHH         HHHHHHH                       HH EE                          
SS_PSSPRED:                          HHHH                                              EE                          
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                D DD                      DDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                               DDD       
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                        D      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40
AA:            STFGKEKALHSTLERKELDGLLTNTRAPYKPPYLTRKRIC 1040
gnomAD_SAV:       D   TV    GTR  E    SM#  #NSL F Q MMS
Conservation:  6779972242245554445363223223121323001333
SS_PSIPRED:                  HHHH                      
SS_SPIDER3:    EH            HHHHH H                 EE
SS_PSSPRED:                  HHHHHHHH                  
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDD  D D                D
DO_SPOTD:                                              
DO_IUPRED2A:   DDDDDDD   D  DDDDD DDDDD