Q9UHL9  GT2D1_HUMAN

Gene name: GTF2IRD1   Description: General transcription factor II-I repeat domain-containing protein 1

Length: 959    GTS: 1.053e-06   GTS percentile: 0.248     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 1      BenignSAV: 5      gnomAD_SAV: 433      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MALLGKRCDVPTNGCGPDRWNSAFTRKDEIITSLVSALDSMCSALSKLNAEVACVAVHDESAFVVGTEKGRMFLNARKELQSDFLRFCRGPPWKDPEAEH 100
gnomAD_SAV:          LR ILIKSYRTNC   T  C ED V  PM V   V  V  #  T     TMRN RT  L  K       TQ K          ASL N L  DQ
Conservation:  5312151321221221131112133032355334444545473544444454575443423343387456525333425451471356223012224120
SS_PSIPRED:                            HHHHHHHHHHHHHHHHHHHHHHHH      EEE     EEEEE   EEEE   HHHHHHHHH              
SS_SPIDER3:                             HHHHHHHHHHHHHHHHHHHHHH     E EEEE   EEEEE    EEEEE  HHHHHHHHHH             
SS_PSSPRED:                             HHHHHHHHHHHHHHHHHHHHHHHHHH   EEEE    EEEE     EEE  HHHHHHHHHH              
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDD                                                                     DDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDD                                                                          DDDDDDDDD
DO_IUPRED2A:                     D                                                                            DDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            PKKVQRGEGGGRSLPRSSLEHGSDVYLLRKMVEEVFDVLYSEALGRASVVPLPYERLLREPGLLAVQGLPEGLAFRRPAEYDPKALMAILEHSHRIRFKL 200
gnomAD_SAV:       L*QVKS DH  HQ     A      Q  G D                        #G E  V     QD   QS      R    F K   G H T 
Conservation:  0312111111111122122311544335464533262256445352222254545232344224241745342242272267214712674463353633
SS_PSIPRED:                           HHHHHHHHHHHHHHHHHHHHH         HHHHHH    EEEE               HHHHHHHHH    EEEEE
SS_SPIDER3:                           HHHHHHHHHHHHHHHHHHHHH     E   HHHH     HEEEEE              HHHHHHHHH     EEEE
SS_PSSPRED:                           HHHHHHHHHHHHHHHHHHHHH         HHHHH     EEEEE              HHHHHHHHHH   EEEEE
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDD                                                                                  
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDD                                                                               
DO_IUPRED2A:   DDDDDDDDDDDDDDDD                                                                                   D

                       10        20        30        40        50        60        70        80        90     
AA:            KRPLEDGGRDSKALVELNGVSLIPKGSRDCGLHGQAPKVPPQDLPPTATSSSMASFLYSTALPNHAIRELKQEAPSCPLAPSDLGLSRPMPEPKATGAQD 300
BenignSAV:             W                                           T                                               
gnomAD_SAV:       P H RW L DPA  KS F NT RLQ    QD #LME L   LS TA  FV      MV SS T *       FYR STNN #  Q #      A   
Conservation:  4522232132211121230121222111112122112221111111221324223544323242212161333022112113211111212212222147
SS_PSIPRED:                  EEE                                       EEE     HHHHH           HHH                 
SS_SPIDER3:                        E                                    E        HHHH          HHH                 
SS_PSSPRED:                                                                      HHHH                              
DO_DISOPRED3:       DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:           DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDD     D D                D  DDDDDDDDDDDDDDDDD  DD                    DD    DD DDDDDDDDDDDDDD  DDDD

                       10        20        30        40        50        60        70        80        90     
AA:            FSDCCGQKPTGPGGPLIQNVHASKRILFSIVHDKSEKWDAFIKETEDINTLRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIVGIPDKIPFKR 400
PathogenicSAV:                         C                                                                           
gnomAD_SAV:     YY  EH RIW     L  FDV  S #   IR R  E  T  R  K   M Q        R        N T A L # F     S A M #L   #  H
Conservation:  1263132221231432254211642335353233253742442266977785238436843776363322333367522444223441426455345544
SS_PSIPRED:                             EEEEEE   HH          HHHHHHHHHHHHHHHHHHHHH     EE  HHHHH     EEEE          
SS_SPIDER3:                             EEEEEE   HHHHHHHH     HHHHHHHHHHHH  HHHHH      EE   HHH      EEEE       EE 
SS_PSSPRED:                            EEEEEE                    HHHHHHHHHHHHHHHHH         HHHH     EEEEE          
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDD D   DDDD   DDDDDDDDDDDDDDD                                                   
DO_SPOTD:      DDDDDDDDDDDDDDDD                                                                                    
DO_IUPRED2A:   DDDDDD  D     DDD                                                                                   

                       10        20        30        40        50        60        70        80        90     
AA:            PCTYGVPKLKRILEERHSIHFIIKRMFDERIFTGNKFTKDTTKLEPASPPEDTSAEVSRATVLDLAGNARSDKGSMSEDCGPGTSGELGGLRPIKIEPED 500
gnomAD_SAV:      A    R  Q   K    N  V      *         V M    T Q V I   FC   I      #W  RS#I  E      RK  RM LV     V
Conservation:  5245747574667434626363545484334332232133112232123334112611212132121113432222222231222232323425535525
SS_PSIPRED:           HHHHHHHHH    EEE     HHHH         HH             HHHHHHHHH                          EEEEE    
SS_SPIDER3:           HHHHHHHH     EEE      H          H                    E                                      
SS_PSSPRED:          HHHHHHHHH    EEEEE    HHH                                                                     
DO_DISOPRED3:                                 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                       DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                        DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD       
MODRES_P:                                                     S                                                    

                       10        20        30        40        50        60        70        80        90     
AA:            LDIIQVTVPDPSPTSEEMTDSMPGHLPSEDSGYGMEMLTDKGLSEDARPEERPVEDSHGDVIRPLRKQVELLFNTRYAKAIGISEPVKVPYSKFLMHPEE 600
BenignSAV:                                                   V                                                     
gnomAD_SAV:           IS  LLN  G   L   Y  W N     GI    D G ESQ K  LMK TRS MLQL QE   V    Q  Q # VL  I  L  N   Y   
Conservation:  2564665475242135431312311243213122122112132111321211112422423532633365166314552445323323464326433631
SS_PSIPRED:       EE          HH                 HHHH                    HHHHHHHHHHHHHHHHHHHHHH          HHHHH  HHH
SS_SPIDER3:        E          H                  HHH                      HHHHHHHHHHHHHH  HHHHHH     EE  HHHH     H
SS_PSSPRED:                                                                HHHHHHHHHHHHHHHHHHHHH         HHHH     E
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                       
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DD                                   
DO_IUPRED2A:    DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                       

                       10        20        30        40        50        60        70        80        90     
AA:            LFVVGLPEGISLRRPNCFGIAKLRKILEASNSIQFVIKRPELLTEGVKEPIMDSQGTASSLGFSPPALPPERDSGDPLVDESLKRQGFQENYDARLSRID 700
BenignSAV:                                                        V                                              V 
gnomAD_SAV:       M    AV FH  S L  TN Q                K  S  IE  TV     DP    F    S GG  RHL M K   S  L K   VSFLWVN
Conservation:  6352735353334453436335534431251132545344354232211111001111111111111111211012011222022112242344543644
SS_PSIPRED:    EEEE               HHHHHHHHH     EEEEE HHH               HHH                    HHHH         HHH    
SS_SPIDER3:    EEEE      E        HHHHHHHHH     EEEEE HHH                                                   HH     
SS_PSSPRED:    EEE                HHHHHHHHHH   EEEEEE                                                     HHHHHH   
DO_DISOPRED3:                                            DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                  DDD     D   D DDDDDDDDDDDDDDDDDDDD                   

                       10        20        30        40        50        60        70        80        90     
AA:            IANTLREQVQDLFNKKYGEALGIKYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIKFTVTRPFQGLIPKPDEDDANRLGEKV 800
gnomAD_SAV:    F# I      E   R *R              #     S M  K      #       SF            VE    GS  R   N G   TSSFR   
Conservation:  5533452233154234465469322633663244333842516566646688658456555555468522345464523333233324535213435233
SS_PSIPRED:        HHHHHHHHHHHHHHHHH     EE  HHH       EEEEE                 HHHHHHHH   EEEE                 HHHHHH
SS_SPIDER3:        HHHHHHHHHHHHHHHHH     EE    HH      EEEE                  HHHHHHHH   EEEEE  E           HHHHHHHH
SS_PSSPRED:        HHHHHHHHHHHHHHHHH                   EEEEE                HHHHHHHH   EEEEE                    HHH
DO_DISOPRED3:  DDDDDDDDDDDDDD                                             D                              DDDDDDDDDD
DO_SPOTD:      DD                                                                                                  
DO_IUPRED2A:                                                                                          DD      D    

                       10        20        30        40        50        60        70        80        90     
AA:            ILREQVKELFNEKYGEALGLNRPVLVPYKLIRDSPDAVEVTGLPDDIPFRNPNTYDIHRLEKILKAREHVRMVIINQLQPFAEICNDAKVPAKDSSIPKR 900
gnomAD_SAV:      Q #      K         Q   F     Q N  TM  MSV  G S Q   M Y  Q  EF N Q        KRF R P M S    L  HR  H H
Conservation:  3744353346325453436421442564424212633424176614515556324331234456152213132621254322323221112122112345
SS_PSIPRED:    HHHHHHHHHHHHHHHHH          HHH       EEEE               HHHHHHHHHHH   EEEEEE                        
SS_SPIDER3:    HHHHHHHHHHHHHHHHHH     E   HHHE      EEEE               HHHHHHHHH HH HHHEEHH      HH                
SS_PSSPRED:    HHHHHHHHHHHHHHHHHH           E      EEEE                 HHHHHHHHHHH   EEEEE                        
DO_DISOPRED3:                                                                                 DDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                              DDD        DD D        DDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                            DDD                                               DDDDDDDDD
MOTIF:                                                                                                          PKR

                       10        20        30        40        50        6
AA:            KRKRVSEGNSVSSSSSSSSSSSSNPDSVASANQISLVQWPMYMVDYAGLNVQLPGPLNY 959
gnomAD_SAV:    NK # L   CDP  TLF   L   L#  T TS    M   V TL#C S  M RL     
Conservation:  56342131321123121121112001201222221331411111211111111111111
SS_PSIPRED:                                        EE                     
SS_SPIDER3:                                      E               EE       
SS_PSSPRED:                                       EEE           EE        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                          B
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                          
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDD                               
MOTIF:         KRKRV