Q9UN70  PCDGK_HUMAN

Gene name: PCDHGC3   Description: Protocadherin gamma-C3

Length: 934    GTS: 1.116e-06   GTS percentile: 0.275     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


            gnomAD_SAV: 472      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MVPEAWRSGLVSTGRVVGVLLLLGALNKASTVIHYEIPEEREKGFAVGNVVANLGLDLGSLSARRFRVVSGASRRFFEVNRETGEMFVNDRLDREELCGT 100
gnomAD_SAV:         R  *     K # IF  P  S    KATQC VQ  TK A  MS #F#D D  ICC  S S WM  A  GK  #   KI#G C S G  # KQY I
Conservation:  1111111111110000001111001000012132724287311531564432563421115104235422111114314211261514134589715911
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                     
SS_PSIPRED:       HHHH     HHHHHHHHHHHHHHHHH        HHH        HHHHH    HHHHH   EEEE       EEE     EEEE     HHHHH  
SS_SPIDER3:      HHHHH     HHHHHHHHHHHHHHHH H  EEEE         EHHHHHHHH   HHHHHH   EEEE     EEEEE     EEE     HHHHH  
SS_PSSPRED:       HHHH       HHHHHHHHHHHHHHHHH              EEEHHHHH    HHH     EEEE     EEEEEE    EEE      HHHHH  
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDD                                                                          
DO_SPOTD:      DDDDDDDDDD                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            LPSCTVTLELVVENPLELFSVEVVIQDINDNNPAFPTQEMKLEISEAVAPGTRFPLESAHDPDVGSNSLQTYELSRNEYFALRVQTREDSTKYAELVLER 200
gnomAD_SAV:    RL   I     MDK      EK     N        AR V #K R#  T   PI   I#DG   E   S  #  R S H#T     Q      VAM   H
Conservation:  1229241144334233333131526195996290900101133519241161141511709193405353280510302615110111131322463621
SS_PSIPRED:       EEEEEEEEE    EEEEEEEEEE             EEEEEE                    HHH  EEE      EEEEEE      EEEEEEE  
SS_SPIDER3:        EEEEEEEE    EEEEEEEEEE            EEEEEE E        E               EEE E    EEEEEEE     EEEEEEEE 
SS_PSSPRED:       EEEEEEEEEE   EEEEEEEEEEEE           EEEEEEE                                 EEEEE        HHHHHHHH
DO_DISOPRED3:                               D                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                      DD DDDD          D DDDDDDD D D DDD                            D  

                       10        20        30        40        50        60        70        80        90     
AA:            ALDREREPSLQLVLTALDGGTPALSASLPIHIKVLDANDNAPVFNQSLYRARVLEDAPSGTRVVQVLATDLDEGPNGEIIYSFGSHNRAGVRQLFALDLV 300
gnomAD_SAV:       Q W  #I #   T  R  S  TVN SV  E P   H #   S P HWVH M G   S  M   I  EP G  S D     C P #       #FGFG
Conservation:  1584811102052526185716144523060616283775171713128231409531133043152919190414315180412011110002505400
SS_PSIPRED:            EEEEEEEEE        EEEEEEEEEE            EEEEEEE       EEEEEEEE       EEEEEEE      HHHHHEEE   
SS_SPIDER3:            EEEEEEEEEE  E  E EEEEEEEEEE        E   EEEEEEE       EEEEEE         EEEEEEE     HHHHHHEEE   
SS_PSSPRED:    HHHHHH HHHHHHHHHH         EEEEEEEEEE           EEEEEEE       EEEEEE          EEEEEE     HHHHHHHHE   
DO_DISOPRED3:                                           DDD D                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:               D                                                   DDDD                                
CARBOHYD:                                                  N                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            TGMLTIKGRLDFEDTKLHEIYIQAKDKGANPEGAHCKVLVEVVDVNDNAPEITVTSVYSPVPEDAPLGTVIALLSVTDLDAGENGLVTCEVPPGLPFSLT 400
gnomAD_SAV:     RL SVN          R FC  D   #TS#D T     L   #   ST #  L  M N #   GS  A MT      PG  #   L  K  #       
Conservation:  1815140204858101032406152912321113132425251928971914032421115173211332444436191842163130414111137151
SS_PSIPRED:      EEEE          EEEEEEEEE        EEEEEEEEEE       EEEEEE             EEEEEEEE        EEEEE      EEEE
SS_SPIDER3:      EEEEEEE       EEEEEEEEEE      EEEEEEEEEEEE       EEEEE             EEEEEEEEE       E EEE       EEE
SS_PSSPRED:      EEEEE          EEEEEEEE         EEEEEEEEEEE      EEEEE            EEEEEEE           EEEE       EEE
DO_DISOPRED3:                                                   DDDDD  D                                           
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                        D DD                                           

                       10        20        30        40        50        60        70        80        90     
AA:            SSLKNYFTLKTSADLDRETVPEYNLSITARDAGTPSLSALTIVRVQVSDINDNPPQSSQSSYDVYIEENNLPGAPILNLSVWDPDAPQNARLSFFLLEQG 500
gnomAD_SAV:     C          V   W   S    N   GGT S    V K L    F       E   AFHVI   A   L# L        S SLR   F VYVMV  
Conservation:  2311345252411057980031444442428081524221104051638397629150101603140976135134224170918121452525241100
SS_PSIPRED:    E     EEEEE           EEEEEEEEE       EEEEEEEEEE            EEEEEEE       EEEEEEEE        EEEEEEE   
SS_SPIDER3:    E    EEEEEE           E EEEEEEE      EEEEEEEEEEEE           EEEEEE        EEEEEE         EEEEEEEE   
SS_PSSPRED:    E     EEEEE            EEEEEEE           EEEEEEE              EEEEEE       EEEEE          EEEEEEE   
DO_DISOPRED3:                                                     DDDD D                                           
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                           DD                        D DDD  DDDDDDDD                                   
CARBOHYD:                             N                                                     N                      

                       10        20        30        40        50        60        70        80        90     
AA:            AETGLVGRYFTINRDNGIVSSLVPLDYEDRREFELTAHISDGGTPVLATNISVNIFVTDRNDNAPQVLYPRPGGSSVEMLPRGTSAGHLVSRVVGWDADA 600
gnomAD_SAV:    D  R MS C KV #  CV    M   *  W K   A   RY# I     T R SVV   #    L#          M # TPD   SL   W I   V  
Conservation:  1120233124443245815133036645111140305141739153423332414061727841625845121221143352352133455556448174
SS_PSIPRED:          EEEEEEE    EEEE        EEEEEEEEEEE         EEEEEEEEE       EE          EE         EEEEEEEEE   
SS_SPIDER3:          EEEEEEE    EEEEE     H  EEEEEEEEEEE        EEEEEEEEE       EE           E         EEEEEEEEE   
SS_PSSPRED:          EEEEEEE     EE      HHHHHHHEEEEEEE         EEEEEEEEE                  E          EEEEEEEEEE   
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                    DDDDDDDDDDDDDDDDD                  
CARBOHYD:                                                       N                                                  

                       10        20        30        40        50        60        70        80        90     
AA:            GHNAWLSYSLLGSPNQSLFAIGLHTGQISTARPVQDTDSPRQTLTVLIKDNGEPSLSTTATLTVSVTEDSPEARAEFPSGSAPREQKKNLTFYLLLSLIL 700
gnomAD_SAV:     N   V        K #  DV V A      HAA  I   KE#I      S KA   N  A I   I NPTGSG ##  DYVH  R  I I   I  V P
Conservation:  5375775514232453247144144855241513143622363634242336133453422524342313232222212110101112134236446532
STMI:                                                                                                       MMMMMMM
SS_PSIPRED:     HHHHHHEEE         EEE      EEEE         EEEEEEEEE      EEEEEEEEEEE   HHHH         HHH   HHHHHHHHHHH
SS_SPIDER3:      EEEEEEEEE       EEE     EEEEEEE         EEEEEEEE  E   EEEEEEEEEEEE   HHH          HH   HHHHHHHHHHH
SS_PSSPRED:      HHHHHHE          EE      EE             EEEEEEEE        EEEEEEEEE   HHHHH              HHHHHHHHHHH
DO_DISOPRED3:                                                                         DDDDDDDDDDDD                 
DO_SPOTD:                                                                                   DDDDDDDD               
DO_IUPRED2A:                                DDDDDDD    DDDDDDDDD         DDDDDD D D  D DDDDDDDDDD                  
CARBOHYD:                    N                                                                         N           

                       10        20        30        40        50        60        70        80        90     
AA:            VSVGFVVTVFGVIIFKVYKWKQSRDLYRAPVSSLYRTPGPSLHADAVRGGLMSPHLYHQVYLTTDSRRSDPLLKKPGAASPLASRQNTLRSCDPVFYRQV 800
gnomAD_SAV:            ALR  TIR      PTN C P#     G LELPF   SLW   I   R     I    SHR   #Q AR VR #  # #M W   Q#     
Conservation:  5522332432233224322211211111210101111211222324321321531324423242452133222122101223101011010011111110
STMI:          MMMMMMMMMMMMMM                                                                                      
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHHH   HHHH                            EEEEEE         EEEE                     HHHHH
SS_SPIDER3:    HHHHHHHHHHHHHHHHHHH    HHH                    E        EEEEEE        E EE                    HHHHHHH
SS_PSSPRED:    HHHHHHHHHHHHHHHHHH     HHHH                             EEEEE          EE                      HHHHH
DO_DISOPRED3:  D                           DD                                               D DDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                                           DDDDDD         
DO_IUPRED2A:                                 D        D    DD                     D  DDDDDDDDDDD DDD               

                       10        20        30        40        50        60        70        80        90     
AA:            LGAESAPPGQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIP 900
gnomAD_SAV:     R KRT# R K L  M  H   T  SRIRR R  N IS  S# P      H    V T  V   GP   RA D V   TH R  S RHYMLH H     L
Conservation:  1001011100011111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
SS_PSIPRED:                                                  HHHHHHHHHH    HH                                  EEE 
SS_SPIDER3:    H                    H                        HHHHHHHHHH   HH                                   EE  
SS_PSSPRED:                                                  HHHHHHHHHHH                                       EEE 
DO_DISOPRED3:  DDDDDDDDDDDDDDDDD  DDDDDDDDDDDDDDDDD                                              D                 
DO_SPOTD:        DDDDDDDD                   DD                             DDDDD                                   
DO_IUPRED2A:     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD   DDDD DDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDD

                       10        20        30    
AA:            GSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 934
gnomAD_SAV:    D S     TV  W D   E   S    L     *
Conservation:  1111111111111111111111111111111111
SS_PSIPRED:                                      
SS_SPIDER3:        EE                            
SS_PSSPRED:                                      
DO_DISOPRED3:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:             DDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD