Q9UN71  PCDGG_HUMAN

Gene name: PCDHGB4   Description: Protocadherin gamma-B4

Length: 923    GTS: 1.66e-06   GTS percentile: 0.519     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


            gnomAD_SAV: 529      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MGSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSEKPYFTVSAESGELLVSSRLDREEICGKKP 100
gnomAD_SAV:    L C  EG    DK    V            G  C M  Q  #M  I  K        IR    *   F     *   RV IR   A  K YWGD # M  
Conservation:  0000000000000002000101111000102331624186111431553442552311013004232413111450431139161412258980493111
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                      
SS_PSIPRED:              HHHHHHHHHHHHHHHHHHHHH                HHHHHH    HHHHH    EEE     EEE     EEEE     HHHHH    
SS_SPIDER3:                  HHHHHHHHH   HH H  EEEE  H      EE  HHHH    HHHHHH   EEEE   EEEEE     EEE     HHHHH    
SS_PSSPRED:               HHHHHHHHHHHHHHHHHHHHH             EE HHHHHH   HHH     EEEEE    EEEE    EEEE     HHHHH    
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDBBDD                                                             
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDD                                                                              
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            ACALEFEAVAENPLNFYHVNVEIEDINDHTPKFTQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSLINKEKSDGSKYPEMVLKTPL 200
gnomAD_SAV:         SVV  G S #  Q       S  #  E RHY    R  KFT*T  *   R    V VRG I RT**       L   #K  NA    Q# S KL 
Conservation:  0823134323328423214151619489628090000104141912124224161091929331734208062141261501101032111446462217
SS_PSIPRED:     EEEEEEEEEE   EEEEEEEEEE            EEEEEEE       EEE          HH   EEEE     EEEEEEE       EEE      
SS_SPIDER3:      EEEEEEEEE    EEEEEEEEEE       E   EEEEEEEEE     EEE               EEE      EEEEEEE     EEEEEEE    
SS_PSSPRED:      EEEEEEEEE    EEEEEEEEEEE           EEEEEE       EE                          EEE             E     
DO_DISOPRED3:                             DDDDDD DD                                                                
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                    D  DDDDD                       DDD               DD      DDDDDDD   

                       10        20        30        40        50        60        70        80        90     
AA:            DREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDVYRVSLSENVYPGTTVLQVTATDQDEGVNAEITFSFSEASQITQFDLNSNTGEIT 300
gnomAD_SAV:        R   PVI SV   RS     I HM  PE  DS  GL  N # H # I   GC VPM    A#MN   CG DKS L  I V PF         WK  
Conservation:  8691110316173619481313453215051729299719181111323040732102214304182809251652407161121101070531039141
SS_PSIPRED:          EEEEEEEEE        EEEEEEEEEE            EEEEEE        EEEEEEEE       EEEEEEEE     EEEEE     EEE
SS_SPIDER3:         EEEEEEEEEEE     E EEEEEEEEEE        E   EEEEEEE       EEEEEE       E EEEEEEEEE   EEEEEE     EEE
SS_PSSPRED:     HHHHHHHHHHHHHHH        EEEEEEEEEE           EEEEEEEE      EEEEEEE        EEEEEEE      EEEE      EEE
DO_DISOPRED3:                                             D                                                        
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                D                               DDD DDD                                

                       10        20        30        40        50        60        70        80        90     
AA:            VLNTLDFEEVKEYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAELGTHIALLKVRDKDSRHNGEVTCKLEGDVPFKILTSSRNTY 400
gnomAD_SAV:      K  YVKDF   ALD  E#GSEETTV F AA G #  K  T   MLR  SKI T ##  *  T     #H VFTDS            L #    T R 
Conservation:  3120485811105140516291613132505151619178619351414021042844113426645231818330442404040001281511221126
SS_PSIPRED:    E        EEEEEEEEEEE     EEEEEEEEEEE       EEEEEE             EEEEEEEE        EEEEEE     EEEEE     E
SS_SPIDER3:    E     H    EEEEEEEEEE    EEEEEEEEEEEE       EEEEE   E         EEEEEE       H  EEEEEE     EEEEE    EE
SS_PSSPRED:    E          EEEEEEEEEE     EEEEEEEEEEE       EEEEE              EEEEE           EEEE       EEEE     E
DO_DISOPRED3:                                            DDDDD  D                                                  
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                               DDDDD                   

                       10        20        30        40        50        60        70        80        90     
AA:            KLVTDAVLDREQNPEYNITVTATDRGKPPLSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLGPNGQVSYCIMASDLEQRELS 500
gnomAD_SAV:     VM    VNS RD   D SIKTI WC A #CA    N R  N    TL  *R YCT  LGD  LSE  V RL    T S## S F  GSVVTY K W   
Conservation:  2534110576900205152515181915241101040405295996170902003131419811341241150609190206405262411101010022
SS_PSIPRED:    EE               EEEEEE        EEEEEEEEEE            EEEEEEE       EEEEEEEE        EEEEEEE          
SS_SPIDER3:    EEEE             EEEEEEE  E     EEEEEEEEE            EEEEEE        EEEEEEEE       EEEEEEEEE      E E
SS_PSSPRED:    EEE              EEEEEE          EEEEEEEEE           EEEEEEE        EEEEEE         EEEEEE           
DO_DISOPRED3:                                              DDD                                                     
DO_SPOTD:                                                                                                          
DO_IUPRED2A:      DD        DDDDDDDDDDDD D D DDDDDDDD                      D    DDDDDDDDDDDD                       
CARBOHYD:                      N                                                                                   

                       10        20        30        40        50        60        70        80        90     
AA:            SYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVDDRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNA 600
gnomAD_SAV:    C##PV SK RM LT    YQKL H  GFI HPH * L P   K   CM  G#HD Y  W Q    D NR V  GT  RV K S    TL VL E  #  V
Conservation:  4434532137153322356562130514051518182313134324152619186618053371010111201214303401223337536380656396
SS_PSIPRED:    EEEEEE     EEEEE   HHHEEEEEEEEEEE         EEEEEEEEE       EEE                       EEEEEEEEE    HHH
SS_SPIDER3:    EEEEEE     EEEEE       EEEEEEEEEEE        EEEEEEEEE       EEE           EEE         EEEEEEEEE      H
SS_PSSPRED:    EEEEEE     HHHHHH HHHHHHHHHHHHEEE         EEEEEEEEE                                 EEEEEEEEE     HH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                               D                              DD                                       
CARBOHYD:                                                N                                                         

                       10        20        30        40        50        60        70        80        90     
AA:            WLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLPDITDRPDPSDLQAELQFYLVVALALISVL 700
gnomAD_SAV:         E HGNKHR LT     AQML  S   VTHPLH S V DL#  E A# L#SVS # G TG F GLPTG  YC##S GP T    S AA S  L  P
Conservation:  6726240221211130420238552312030404001214232424361512644324041313110111111010000100001333595446425324
STMI:                                                                                                   MMMMMMMMMMM
SS_PSIPRED:    HHHHEE         EE          HHH        EEEEEEEE      EEEEEEEEEEE  HHHH                HHHHHHHHHHHHHHH
SS_SPIDER3:     HHHHHHH      EEE      EEEEEE         EEEEEEEE  E   EEEEEEEEEEE  HHHH              HHHHHHHHHHHHHHHHH
SS_PSSPRED:    HHHHHHHE       EE     HHHHHHHH    HHHEEEEEEEEE        EEEHHHHHHHHHHHH              HHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                       DDD  D DD                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            FLVAMILAIALRLRRSSSPASWSCFQPGLCVKSESVVPPNYSEGTLPYSYNLCVAHTGKTEFNFLKCSEQLSSGQDILCGDSSGALFPLCNSSELTSHQQ 800
gnomAD_SAV:    LF# # P#VVWC L         G         A    SS*G    L  CH    N   M V    RG R N     PRD # RT   I    QS  D*K
Conservation:  4323322322043201000000000000000001001120121111121412222021002213110000001000100000000000000000000000
STMI:          MMMMMMMMMM                                                                                          
SS_PSIPRED:    HHHHHHHHHHHHHH     HHHH                   EE    EEEEEEE      EEE                                    
SS_SPIDER3:    HHHHHHHHHHHHHHH      HH      EE                  EEEEEE     EEEEE             E                     
SS_PSSPRED:    HHHHHHHHHHHHHHH    HHHH                          EEEEEE      EEE                                    
DO_DISOPRED3:                                                                      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                               DDDD  DDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                                                    D D

                       10        20        30        40        50        60        70        80        90     
AA:            APPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG 900
gnomAD_SAV:     L  M  H   T  SRIRS R  N IS  S# P      H    V T  V   GP   AA D V   TH R  S RHYMLH C     LD S     TV 
Conservation:  0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
SS_PSIPRED:          EEE HHH                      HHHHH   EEEHHHHH                                  EE             
SS_SPIDER3:          E                            HHHHH EHEEEHHHH                                 H EE      H      
SS_PSSPRED:           E                           HHHHHHHHHHHHHHH                                   EE             
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDD                                    D    DDDDDDDDD   D D              DDDDDDD
DO_SPOTD:      DDDDD       DDDDDDDDDDDDDD                                                                   D  DDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD     D    DD   D DDDDDDDDDDDDDD  DDDDDDDDDD D DDDDDDDDDDDDDDDDDDDD

                       10        20   
AA:            KRDGKAPAGGNGNKKKSGKKEKK 923
gnomAD_SAV:     L D   E   S    L     *
Conservation:  00000000000000000000000
SS_PSIPRED:                           
SS_SPIDER3:                           
SS_PSSPRED:                           
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDD