Q9UN73  PCDA6_HUMAN

Gene name: PCDHA6   Description: Protocadherin alpha-6

Length: 950    GTS: 2.28e-06   GTS percentile: 0.746     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 1      gnomAD_SAV: 669      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MVFTPEDRLGKQCLLLPLLLLAAWKVGSGQLHYSVPEEAKHGTFVGRIAQDLGLELAELVPRLFRMASKDREDLLEVNLQNGILFVNSRIDREELCGRSA 100
gnomAD_SAV:    VM  #G#     #  HL P F S # RR HP#NC SK  T RN   Q V# V  KV#KPLQPMVGV   ESKEVP  SV  D   A Y  #H K  WQRV
Conservation:  1100000000000010021110121021243242427532263135334455242213311414331222011142331344132512144441381121
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                       
SS_PSIPRED:             HHHHHHHHHHHHHHHHHHH       HHHH   EE  HHHHHH   HHHHH  EEEEE       EEEE    EEEE     HHHHH    
SS_SPIDER3:                HHHHHHHHHHHHHH H  EEEEE HHH    EE  HHHH    HHHH     EEE      EEEEE    EEEE     HHHHH    
SS_PSSPRED:              HHHHHHHHHHHHHHHH         HHH     EE HHHHHH   HHHHHHH HEEE       EEE     EEEE     HHHH     
DO_DISOPRED3:  DDDDDDDDDDDBBBDDDDDDDDD                                                                             
DO_SPOTD:      DDDDDDDDDDD                                                                                         
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            ECSIHLEVIVDRPLQVFHVDVEVRDINDNPPLFPVEEQRVLIYESRLPDSVFPLEGASDADVGSNSILTYKLSSSEYFGLDVKINSDDNKQIGLLLKKSL 200
gnomAD_SAV:     G T   MTAE##  F   NM  KN  H#L # LE  E L  D Y  LV   T *## HE F *    N   RTR#H R  M      S  TRF    P 
Conservation:  1523144434215213333341617344316161110003042721113213251160718331542225152133371421111111100316351316
SS_PSIPRED:     EEEEEEEEE    EEEEEEEEEE          HHEEEEEEE                    HHH  EEE      EEEEEEE     EEEEEEE    
SS_SPIDER3:      EEEEEEEEE   EEEEEEEEEE            EEEEEEE EE    EEE              EEEE      EEEEEE      EEE EEE E  
SS_PSSPRED:     EEEEEEEEE    EEEEEEEEEEE           EEEEEEE                                   EEE          HHHHHH   
DO_DISOPRED3:                              D                                                               D   D   
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            DREEAPAHNLFLTATDGGKPELTGTVQLLVTVLDVNDNAPTFEQSEYEVRIFENADNGTTVIRLNASDRDEGANGAISYSFNSLVAAMVIDHFSIDRNTG 300
gnomAD_SAV:    GGDD L  H C I AG#  S   D A RMASA   SY  A#LG  GCQ# ML     R A #KV  C Q  ETY EV H  SRR#V          PHMR
Conservation:  5771121216252519463523363205060528376417171312612140842003314214172819261732417130101110000170531038
SS_PSIPRED:          EEEEEEEEE       EEEEEEEEEEE            EEEEEEE       EEEEEE          EEEEEE     HHHHHHEEE     
SS_SPIDER3:          EEEEEEEEE   E  EEEEEEEEEEEEE           EEEEEEE      EEEEEEE          EEEEEE     HHHHHHEEE     
SS_PSSPRED:     HHHHHHHHHHHEEE         EEEEEEEEEE           EEEEEEE       EEEEEE           EEEE     HHHHHHHEEE     
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:             D D                                                 DDDD                                  
CARBOHYD:                                                              N       N                                   

                       10        20        30        40        50        60        70        80        90     
AA:            EIVIRGNLDFEQENLYKILIDATDKGHPPMAGHCTVLVRILDKNDNVPEIALTSLSLPVREDAQFGTVIALISVNDLDSGANGQVNCSLTPHVPFKLVST 400
gnomAD_SAV:     VM P T H   *  H   #   G D  HTE     S T M    K## KT#AT T SLLK PRS  I  QL LKHV L G R# T     QL   PEPS
Conservation:  1514120575910122251525182601331435242526282774172413332112527431034354353418191305413130302013515113
SS_PSIPRED:    EEEEE         EEEEEEEEE        EEEEEEEEEE       EEEEEE             EEEEEEEE        EEEEEE     EEEEE 
SS_SPIDER3:    EEEEEEE       EEEEEEEEEE      EEEEEEEEEEE        EEEEE   E         EEEEEEEE         EEEEE      EEE  
SS_PSSPRED:    EEEEE          EEEEEEEEE        EEEEEEEEEEE      EEEEE            EEEEEEEEEE        EEEE       EEEE 
DO_DISOPRED3:                                                 DDDDD DDD                                            
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                                                           N              

                       10        20        30        40        50        60        70        80        90     
AA:            FKNYYSLVLDSALDRESVSAYELVVTARDGGSPSLWATASLSVEVADMNDNAPAFAQPEYTVFVKENNPPGCHIFTVSARDADAQENALVSYSLVERRVG 500
gnomAD_SAV:      T *L  P  VV CK#EW H S  N # R    P SI #V   GSHK  SVL  S* K    MRK SSLAR   K C #E    K  PA H* M W # 
Conservation:  3232444351216636111051415241425143423111303164834433414111111313223211411302315062221243131512021002
SS_PSIPRED:        EEEE            EEEEEEEEE       EEEEEEEEEE            EEEEEEE       EEEEEEEE        EEEEEEE     
SS_SPIDER3:       EEEEEE          EEEEEEEEEE        EEEEEEEEE            EEEEEE       EEEEEEE E       EEEEEEEEE    
SS_PSSPRED:       EEEEE             EEEEEEE         EEEEEEEEEE           EEEEEEE       EEEEEEE    H H   EEEEEE     
DO_DISOPRED3:                                                   DDDD                                               
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                              DD                       

                       10        20        30        40        50        60        70        80        90     
AA:            ERALSSYISVHAESGKVYALQPLDHEELELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPALLAPRVGGTGGAVSELVPRSLGAGQVVAKVRAVDAD 600
BenignSAV:                                                                                         V               
gnomAD_SAV:    DCSFWTC#LL # GR #HSP QV  K   MP    RP  SDMRH S KA  HM L NQ   EQT RESG#SVI  EAR#V #W P TDHL VM HT  V 
Conservation:  1012111323221342312112453732113131312142312321322342534252543151311211211112121112123123233454242413
SS_PSIPRED:     EE  EEEEEE     EEE     HHHHEEEEEEEEEEE        EEEEEEEEE                     EEEE        EEEEEEEEE  
SS_SPIDER3:     EE EEEEEEE     EEEE    HHHHH  EEEEEEEE        EEEEEEEEEE      EEE          EE E         EEEEEEEE   
SS_PSSPRED:         EEEEEE    EEEE     HHHHHHHHHEEEEEE        EEEEEEEEEE                    EEE        EEEEEEEEEE  
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                    DDDD                               
CARBOHYD:                                                     N                                                    

                       10        20        30        40        50        60        70        80        90     
AA:            SGYNAWLSYELQPPASSARFPFRVGLYTGEISTTRVLDEADSPRHRLLVLVKDHGEPALTATATVLVSLVESGQAPKASSRASVGAAGPEAALVDVNVYL 700
gnomAD_SAV:     SHY  FW K  SLTN PHL  H#R       I       # LSYW   QG H S LT  GM K     A TD V#  *TWV#    # KSV    K * 
Conservation:  3333334131411111111154133123725222313231211130214241544231424132313122221111121111011101011121233346
STMI:                                                                                                           MMM
SS_PSIPRED:       EEEEEEEE          EEEE    EEEE           EEEEEEEEE      EEEEEEEEEEE                  HHHH  HHHHHH
SS_SPIDER3:       EEEEEEEE E        EEE      EEEEE   H     EEEEEEEEE  E   EEEEEEEEEEEE                 HHH    HHHHH
SS_PSSPRED:        EEEEEEE          EEEE    EEEE            EEEEEEEE        EEEEEEEEE                         HHHHH
DO_DISOPRED3:                                                                          DDDDDDDDDDDDDDDDDD          
DO_SPOTD:                                                                               DDDDDDDDDDDDDDDDDDD        
DO_IUPRED2A:                                                                                  DDD                  

                       10        20        30        40        50        60        70        80        90     
AA:            IIAICAVSSLLVLTLLLYTALRCSAPPTEGACTADKPTLVCSSAVGSWSYSQQRRQRVCSGEGPPKMDLMAFSPSLSPCPIMMGKAENQDLNEDHDAKPR 800
gnomAD_SAV:     M  WVICGV  #K    AG W W QL D####V   M L  R# R   C#   W MG FADD HR   TV TRN  S S I # VQ  YF AERED RQ
Conservation:  4435325224453233232324411120121222113122221113331121131222123311121221212311210000000000000111111111
STMI:          MMMMMMMMMMMMMMMMMM                                                                                  
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHHHHHH              EEEE            EEEEEE         EEEE                            
SS_SPIDER3:    HHHHHHHHHHHHHHHHHHHHHH                EEE            EEEEEE       EEEEEE                            
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHHHHHH                EE          HHH              EEE                             
DO_DISOPRED3:           D                      DDDDD DDDDDDDDDDDDDDDDD                    DDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                                       DDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                          DDDDDDDDDD    D            DDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            QPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIR 900
gnomAD_SAV:         #H  DFP  RVNGA P #Q D  W A  R E RCTAL N A#G  V       SV I         E D RR CSH    NI  VAV   SF  Q
Conservation:  1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
SS_PSIPRED:             HHH         HHH                                                               EEE          
SS_SPIDER3:             H           HHHHH H                                                           EE       EE  
SS_PSSPRED:                                                                                           EE           
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD      D                             DDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD       DDDDDDDDDDD        DDDDD DD
DO_IUPRED2A:   DDDDDDDDDDD         DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50
AA:            QEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ 950
gnomAD_SAV:      #  G VGN  Y I S M  I#    TRR  T    N  RK M E    
Conservation:  11111111111111111111111111111111111111111111111111
SS_PSIPRED:                      HHHH           HHHHHHH          
SS_SPIDER3:                 E                      HH            
SS_PSSPRED:                                      HHHHHH          
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD