Q9UQ13  SHOC2_HUMAN

Gene name: SHOC2   Description: Leucine-rich repeat protein SHOC-2

Length: 582    GTS: 6.665e-07   GTS percentile: 0.092     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 3      BenignSAV: 6      gnomAD_SAV: 153      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MSSSLGKEKDSKEKDPKVPSAKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSAAQPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREE 100
PathogenicSAV:  G                                                                                                  
BenignSAV:        R        A                                                                                       
gnomAD_SAV:      GIS    #C G  R I T    GR  E C  LRRQN          V       FN S L     I  M      V  A    R G     FK  Q Q
Conservation:  4332375567266543621234633432762312445345453949776475977544432657473797499777762426994976970953277755
SS_PSIPRED:                        HHHHHHHHHH                       HH              HHH               HHHHHHHHHH   
SS_SPIDER3:                        HHHHHHHH       H H                         EEEE HHH                 HHHHHHHH    
SS_PSSPRED:                        HHHHHHHHH                                   EE                     HHHHHHHHHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                     
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD              
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD    

                       10        20        30        40        50        60        70        80        90     
AA:            NSMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLR 200
PathogenicSAV:                                                                         #                           
BenignSAV:                              I                                                                          
gnomAD_SAV:      #       #TRL L  V  S   I          F    GE   D #            AV  G#    Q         K       K E  S V   
Conservation:  4524997567754079234546464374666476654663444563392397957967597754764453625755779775799274747049479799
SS_PSIPRED:       EEE          HHHHH     EEE          HHHHH     EEE          HHHHH     EEE          HHHHH     EEE  
SS_SPIDER3:      EEEE    E  E  HHHH      EEE          HHHH      EEE    E     HHHH      EEE          HHHH      EEE  
SS_PSSPRED:       EEE         HHHHHH     EEHHH        HHHHH     EEE         HHHHHH                  HHHHH     EEE  
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:     D    D                                                                                            

                       10        20        30        40        50        60        70        80        90     
AA:            FNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIP 300
BenignSAV:         A                                                                                               
gnomAD_SAV:       VAAM E M                 K    V    S     I  S    F EDTA      S                I    G     C    T  
Conservation:  9974959925373933744755777666477757979549477797995775594777474475577777759757977477942527775755575354
SS_PSIPRED:            HHHHH     EEE          HHHHH     EEE          HHHHH     EEE          HHHHH     EEE          
SS_SPIDER3:      E EE  HHHH      EEE    E     HHHH      EEE   E   E  HHH       EEE          HHHH      EEE       E  
SS_PSSPRED:           HHHHHHH                HHHHHHH    EEE          HHHH      EEE         HHHHH                H H
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT 400
gnomAD_SAV:    G  T  GV         S  A            S               S      TC       Q                    T           A 
Conservation:  4645255377577497757937774775993555595747549574747994575797599797949799979997977797799979799757999799
SS_PSIPRED:    HHHHH     EEE          HHHHHH     EEE             HHH     EEE          HHHHHH     EEE          HHHHH
SS_SPIDER3:    HHHH      EEE           HHH       EEEE   E          H     EEE            HH       EEE           HHH 
SS_PSSPRED:    HHHHH     EEE          HHHHHHH    EEE                     EEE          HHHHHHH    EE                
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            WTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLG 500
BenignSAV:                                                  S                                                      
gnomAD_SAV:      #         H           I    FF   SRI  I R   S  R           Q  S        I        R  SV      FSDV    
Conservation:  9459557999799737757744992577594577757745747564744579797997975357479497455449777777533594577353553454
SS_PSIPRED:         EEE          HHHHH     EEE          HHHHH     EEE          HHHHH     EEE          HHHHH     EEE
SS_SPIDER3:         EEE          HHHH      EEEE          HHH      EEE    E     HHHH      EEE          HHHH      EEE
SS_PSSPRED:         EEE          HHHH      EEE         HHHHHH                 HHHHHH     EEE         HHHHHH     EE 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80  
AA:            LGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV 582
BenignSAV:                                    G                                                  
gnomAD_SAV:        V            S        S SV T A       R  V  T     G  S   A      T R  N      TV 
Conservation:  5747593459757734545955577433452346355457574455574777944545555574595554574447532235
SS_PSIPRED:              HHHHH     EEE           HHHHH     EEE          HHHH   HHHHHHHHH         
SS_SPIDER3:               HH       EEE           HHHH      EEE          HHHH   HHHHHHHHHH        
SS_PSSPRED:              HHHHH     EE           HHHHHH     EEE          HHHHH    EHHHHHHHH       
DO_DISOPRED3:                                                                                 DDD
DO_SPOTD:                                                                                   DDDDD
DO_IUPRED2A: