Q9UQF0  SYCY1_HUMAN

Gene name: ERVW-1   Description: Syncytin-1

Length: 538    GTS: 1.603e-06   GTS percentile: 0.493     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 4      gnomAD_SAV: 284      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MALPYHIFLFTVLLPSFTLTAPPPCRCMTSSSPYQEFLWRMQRPGNIDAPSYRSLSKGTPTFTAHTHMPRNCYHSATLCMHANTHYWTGKMINPSCPGGL 100
gnomAD_SAV:        *          P    E H  HYII I    V VRTR L R TNT ##MNFP   LP NV   R HKRC   #I      R   E    S  L E 
Conservation:  9324110111111111122101112141125211211121111222211111101111123316311111111122215110011112122201100112
STMI:          SSSSSSSSSSSSSSSSSSSS                                                                                
SS_PSIPRED:          EEEEEEE                                                 EEE          EEEEE   EEEEEEEEE        
SS_SPIDER3:           EEEEEE            E EE         EE           E          EH      HHHHHHEEEEE  EEEEEEEEE        
SS_PSSPRED:        HHHHHHHHHE                                                         HHHHHHH       EEEEEE         
DO_DISOPRED3:  DDD DDDDDDDDDDDDDDDDDDDDD                                                                           
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                    DD                                                 

                       10        20        30        40        50        60        70        80        90     
AA:            GVTVCWTYFTQTGMSDGGGVQDQAREKHVKEVISQLTRVHGTSSPYKGLDLSKLHETLRTHTRLVSLFNTTLTGLHEVSAQNPTNCWICLPLNFRPYVSI 200
BenignSAV:                                 A        Q                                                              
gnomAD_SAV:            LIRNS# HRD #*H   QNRI VL AH  Q  S T   ## EIL     #HI  C  N # N   E#   L *H A  C  RSVSC  H   
Conservation:  3112341112232232432313112111110312121221101141211111111111113212122402221242022101203535321112112212
SS_PSIPRED:        EEE               HHHHHHHHHHHH                           HHHHHHHHHHHHHHHH        EEE            
SS_SPIDER3:      EEEEE            H HHHHHHHHHHHH                            HHHHHHHHHHHHHHHHH       EEEE           
SS_PSSPRED:       EEE                 HHHHHHHHHHH                           HHHHHHHHHHHHHHHH        EEEEE          
DO_DISOPRED3:                        DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                           
DO_SPOTD:                                     D  DDDDDDDDDDDDDDDDDDDDDD                                            
DO_IUPRED2A:                   DDDDDDDDDDDD  DD  D                                                                 
MOTIF:                                                                                              CWIC           
DISULFID:                                                                                           C  C           
CARBOHYD:                                                                          N                               

                       10        20        30        40        50        60        70        80        90     
AA:            PVPEQWNNFSTEINTTSVLVGPLVSNLEITHTSNLTCVKFSNTTYTTNSQCIRWVTPPTQIVCLPSGIFFVCGTSAYRCLNGSSESMCFLSFLVPPMTIY 300
gnomAD_SAV:    AALGER     # T IPI I #  FD    YI   I        H NS  S     H  RM W       A  I V C F#  A AT    V #S R   
Conservation:  3211111111111111111111002013302010422013312111221141100101111111123123243223410440321304223132523142
SS_PSIPRED:                      EE      EEEEEE     EE           EEEEE     EEE     EEEE  EE            EEE     EEEE
SS_SPIDER3:         E                      E       E E            EEE      EEE     EEE                 E       EEE 
SS_PSSPRED:                               E                                EEEE    EEE                          EE 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:             N     N                   N       N                                      N                   

                       10        20        30        40        50        60        70        80        90     
AA:            TEQDLYSYVISKPRNKRVPILPFVIGAGVLGALGTGIGGITTSTQFYYKLSQELNGDMERVADSLVTLQDQLNSLAAVVLQNRRALDLLTAERGGTCLFL 400
BenignSAV:           N                                                                                             
gnomAD_SAV:    A K  HN  MC LC RT      IT#G   SV V  TSD    #H C R        VKW TN   AF*       SAD   QK S    T   *A   S
Conservation:  2312224231022034322224432312221322342232312111301441342142102313301341433334153343243432522244337436
SS_PSIPRED:       HHHH                     HHHHH   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH   EEE 
SS_SPIDER3:        E EE              HHHHHHHHHH    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH  HHHHHHHHHH     E  
SS_PSSPRED:                                             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH    EE  
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
MOTIF:                                                                                                         CLFL
REGION:                           ILPFVIGAGVLGALGTGIGGI                                       LQNRRALDLLTAERGGT    
SITE:                          RV                                                                                  
DISULFID:                                                                                                      C   

                       10        20        30        40        50        60        70        80        90     
AA:            GEECCYYVNQSGIVTEKVKEIRDRIQRRAEELRNTGPWGLLSQWMPWILPFLGPLAAIILLLLFGPCIFNLLVNFVSSRIEAVKLQMEPKMQSKTKIYRR 500
BenignSAV:                                                                                 F                       
gnomAD_SAV:     Q  YH    YR I       Q # #HT D  *   #      R SRL S  R   PT    F E #N K     AF   K      D        T*H 
Conservation:  4427544443455432343133324211121211231522234323333545434223232225451343132134323321111112111111202100
STMI:                                                     MMMMMMMMMMMMMMMMMMMMM                                    
SS_PSIPRED:         EEE      HHHHHHHHHHHHHHHHHHH     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH  EE         
SS_SPIDER3:      E EEEE     E HHHHHHHHHHHHHHHHHHH     HHHHHHHHH H   HHHHHHHHH HHHHHHHHHHHHHHHHHHHHHH     E         
SS_PSSPRED:       EEEEE       HHHHHHHHHHHHHHHHHH     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH              
DO_DISOPRED3:                                                                                                DDDDDD
DO_SPOTD:                                                           DDDDDDDDDDDDDDDDD               DDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                                                  DDDDD
MOTIF:         GEECCY                                                                                              
REGION:                                                                        GPCIFNLLVNFVSSRIEAVK                
DISULFID:         CC                                                                                               
CARBOHYD:              N                                                                                           

                       10        20        30        
AA:            PLDRPASPRSDVNDIKGTPPEEISAAQPLLRPNSAGSS 538
gnomAD_SAV:    S YW VR P#N SN   NL   N  V    CS#    R
Conservation:  10101000010011111111111111111111111111
SS_PSIPRED:                       HHHHH              
SS_SPIDER3:                H       HHHHH             
SS_PSSPRED:                       HHHHHHH            
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   D DD   DDDDDDDDDDDD   DD DDDDD     DD