Q9Y2L9  LRCH1_HUMAN

Gene name: LRCH1   Description: Leucine-rich repeat and calponin homology domain-containing protein 1

Length: 728    GTS: 9.663e-07   GTS percentile: 0.209     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 3      gnomAD_SAV: 329      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MATPGSEPQPFVPALSVATLHPLHHPHHHHHHHQHHGGTGAPGGAGGGGGGSGGFNLPLNRGLERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTV 100
gnomAD_SAV:        R    S#  G  L I   VRQ    QRY  Q  R  T  EVD R    RC S          FK   D WE S    R  G  GA S WYYF  AM
Conservation:  2222222222222222222222222222222222222222222222222200000000001100101100100101010010001011022200100000
SS_PSIPRED:                                                             HHH  HHHHHHHHHH  EEE                       
SS_SPIDER3:                 HHHH                                             HHHHHHHHHH   EE    E  E  HHH     HHHHH
SS_PSSPRED:                                                                  HHHHHHHHHH   E        H HHHHH         
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                            
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD D                                            
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  D                  DD  D DD DDDDDDDDDDDDD 

                       10        20        30        40        50        60        70        80        90     
AA:            QADLSKNRLVEVPMELCHFVSLEILNLYHNCIRVIPEAIVNLQMLTYLNLSRNQLSALPACLCGLPLKVLIASNNKLGSLPEEIGQLKQLMELDVSCNEI 200
gnomAD_SAV:               I VQ  RL    L       V      MIS               T   SV         TR   V        H RE #   I Y K 
Conservation:  0034655542535154223246425464558452495433274474254458857436934673998698556898825595355453168696567955
SS_PSIPRED:    HH           HHHHH     EEE          HHHHH     EEE          HHH      EEE          HHHHH     EEE      
SS_SPIDER3:    HHH          HEHH      EEEE         HHHH  H   E            HHHH     EEEE         HHHH      EEE    E 
SS_PSSPRED:                HHHHHH     EEE          HHHHHHH            HHHHHHHH     EEEE        HHHHHHHH   EEE      
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   D                                                                                                   

                       10        20        30        40        50        60        70        80        90     
AA:            TALPQQIGQLKSLRELNVRRNYLKVLPQELVDLSLVKFDFSCNKVLVIPICFREMKQLQVLLLENNPLQSPPAQICTKGKVHIFKYLSIQACQIKTADSL 300
BenignSAV:                                      P                                                                  
gnomAD_SAV:     V   ET    F Q   IGI   Q  L    # P  R        PMM     QL   H  I      *A L        F TL C NV V P   T C 
Conservation:  4498354548248766846693624663543266744565778663278325536135615286789763755776499457468683454642823545
SS_PSIPRED:        HHHHH     EEE          HHHH     EEE          HHHHH     EEE          HHHHH       EEEE          HH
SS_SPIDER3:        HHHH      E E    EEEE  HHHH    EEE      E E  HHHH      EEE      E   HHHHH   E EEEEEE     E    H 
SS_PSSPRED:     H HHHHHH     HHH          HHHHH    EEE    EEEE HHHHHHHH   EEE         HHHHHHH  EEEEEEE           HH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                    DD               DDDDD
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            YLHTMERPHLHQHVEDGKKDSDSGVGSDNGDKRLSATEPSDEDTVSLNVPMSNIMEEEQIIKEDSCHRLSPVKGEFHQEFQPEPSLLGDSTNSGEERDQF 400
BenignSAV:                                                                                              R          
gnomAD_SAV:    F   # G     QM         E       R         K AI V  S L  T  QR V K L  HR #I  K L    LASFV VNG   VK     
Conservation:  5834344123243344234438686677496765643596878538554756523366321625122123211212233122212131123222221211
SS_PSIPRED:                                                           HHH EEE                                      
SS_SPIDER3:                                   E                           EH                                       
SS_PSSPRED:    H                                                       HHHH                                        
DO_DISOPRED3:                                     D      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:        DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  D DDD  DD     DDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:                                                                           S                              

                       10        20        30        40        50        60        70        80        90     
AA:            TDRADGLHSEFMNYKARAEDCEELLRIEEDVHWQTEGIISSSKDQDMDIAMIEQLREAVDLLQDPNGLSTDITERSVLNLYPMGSAEALELQDSALNGQI 500
BenignSAV:                                                                                          S              
gnomAD_SAV:       P    LKCV #Q  G N     WM   APRK   K N   E EIGV VNK      G     #R N  V   #   V# VE S G  F      C  
Conservation:  2131322122322453431124433325322150141221212222222113344544245422224442321422123633212221222222212221
SS_PSIPRED:                 HHH HHHHHHHHHH               HHHHH HHHHHHHHHHHHHH              HHH      HHHHHH  HHH    
SS_SPIDER3:            HHHH HHHHHHHHHHHHH  H H              H HHHHHHHHHHHHHHH                       HHHHHHHHHH     
SS_PSSPRED:                   HHHHHHHHH                       HHHHHHHHHHHHHHH            HHHH       HHHHH          
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDD DDDDD            DD        DDDDD   DDDD DDD   DDD  DD DDDDD DD DDDD             D DD DDDD   
MODRES_P:              S                                                                                           

                       10        20        30        40        50        60        70        80        90     
AA:            QLETSPVCEVQSDLTLQSNGSQYSPNEIRENSPAVSPTTNSTAPFGLKPRSVFLRPQRNLESIDPQFTIRRKMEQMREEKELVEQLRESIEMRLKVSLHE 600
gnomAD_SAV:        PLA GM  V#  R KR  H   DVG YPLS Y     IVA  RN Q     SHI WQFTEL   LW  I#    KE  # R HKN QK FN   YK
Conservation:  3111331232414122131321122132222141145311232599755964715324323337967768876875599474424963468369651864
SS_PSIPRED:          EEE                                                         HHH    HHHHHHHHHHHHHHHHHHHHH     H
SS_SPIDER3:                            HHH                                             HHHHHHHHHHHHHHHHHHHHHH     H
SS_PSSPRED:                                                                              HHHHHHHHHHHHHHHHHHH      H
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  D                  
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                           
DO_IUPRED2A:    DD       DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DDDD               DDDDDDDD DD  DDDDDD                 
MODRES_P:                                     S   S                               T                                

                       10        20        30        40        50        60        70        80        90     
AA:            DLGAALMDGVVLCHLVNHIRPRSVASIHVPSPAVPKLSMAKCRRNVENFLEACRKLGVPEADLCSPCDILQLDFRHIRKTVDTLLALGEKAPPPTSALRS 700
gnomAD_SAV:    H V V   V I   M  N CQQLF   D    T AR GT        KC KV Q F    S H F  V R    H  *     V  FRQ  R S    C 
Conservation:  6473596986688685955488583689999686646455696588878655866474443254452444322222222222222222222222222222
SS_PSIPRED:    HHHHHHH  HHHHHHHHHH                   HHHHHHHHHHHHHHHHHH   HHH   HHHHHH  HHHHHHHHHHHHHHH           H
SS_SPIDER3:    HHHHHHH  HHHHHHHHH       EEE          HHHHHH HHHHHHHHHH    HHH   HHHHHH   HHHHHHHHHHH              H
SS_PSSPRED:    HHHHHHH   HHHHHHHH       EE           HHHHHHHHHHHHHHHHHH   HHH   HHHHHHH HHHHHHHHHHHHHH             
DO_DISOPRED3:                                                                                            DDDDDDDDDD
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        
AA:            RDLIGFCLVHILFIVLVYITYHWNALSA 728
gnomAD_SAV:    S  #S Y  YT  VL I   *   S CT
Conservation:  2223342354234334332121111311
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHHHHHHHHH  
SS_SPIDER3:    HHHHHHHHHHHHHHHHHHHHH       
SS_PSSPRED:     HHHHHHHHHHHHHHHHHHHHHHHH   
DO_DISOPRED3:  D                           
DO_SPOTD:                              DDDD
DO_IUPRED2A: