Q9Y5E3  PCDB6_HUMAN

Gene name: PCDHB6   Description: Protocadherin beta-6

Length: 794    GTS: 2.168e-06   GTS percentile: 0.712     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 6      gnomAD_SAV: 554      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MMQTKVQNKKRQVAFFILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVFKGNRQHLQFDPQTHDLLLNEKLDREELCGSTEP 100
gnomAD_SAV:    ITR EIH Q #R  L V  #F  Q       DYE KA   DR A S         R  VLWDV   YRA       HL*NRN   Y    #D   V A L
Conservation:  0000000001675113231201102000001624177112222524411344320125106223412211101615200432624042476725931244
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                         
SS_PSIPRED:             HHHHHHHHHHHHHHHH        HHHH    EEHHHHHHH    HHHHHH   EEEE   EEEEEE      EEE     HHHH      
SS_SPIDER3:         H     HHHHHHH H H HH    EEEE HHEE    EEE HHHH    HHHHHH   EEEEE   EEEEE     EEEE     HHHH      
SS_PSSPRED:          HHHHHHHHHHHHHHHHHH                  EEEEHHHHH   HHHHHH   EEEE    EEEE       HHH     HHHH      
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDD                                                                          
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDD D                                                                              
DO_IUPRED2A:   DD                                                                                                  
DISULFID:                                                                                                    C     
CARBOHYD:                                                   N                                                      

                       10        20        30        40        50        60        70        80        90     
AA:            CVLPFQVLLENPLQFFQASLRVRDINDHAPEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEGRKFPELVLDKPLD 200
gnomAD_SAV:       S R  QA # R     F   HV #YP  I  GKTFQ*M  M   RT#L WT T   NNS     #  T# #S # I N# L   G  S  M E R  
Conservation:  8332865452293343112505174984281912133154639321251162510729282606352281511312624131001231225364522187
SS_PSIPRED:    EEEEEEEEE     EEEEEEEEE          HHHEEEEE        EEE               EEEE     EEEEEEE       EEEHH     
SS_SPIDER3:    EEEEEEEE     EEEEEEEEEEE             EEEE        EEE                EE E    EEEEEEE     EE EEEE     
SS_PSSPRED:      EEEEEEEE   EEEEEEEEEEEE           EEEEEE       EE                EEEE      EEE          HHHH      
DO_DISOPRED3:                              D                                                                       
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                         D        DDDDD             D         DDDDD    
DISULFID:      C                                                                                                   
CARBOHYD:                                                                                        N                 

                       10        20        30        40        50        60        70        80        90     
AA:            REEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYEAQVPENNPLGSLVITVSARDLDAGSFGKVSYALFQVDDVNQPFEINAITGEIR 300
BenignSAV:                                   IF                                                                    
gnomAD_SAV:    SKK  H   M  S  DRFLLL  P     #IF  YG F   T G CD RI KKH FS  I I#PVGY HS P W   *S    HE  *R    STP   W
Conservation:  3721123163627295626243433051614283687372812016132329411123043142708192513514192533211202261431038240
SS_PSIPRED:         EEEEEEEEE        EEEEEEEEEE            EEEEE         EEEEEEEE        EEEEEEEE       EEE     EEE
SS_SPIDER3:         EEEEEEEE E     EEEEEEEEEEEEE          EEEEEEE        EEEEEEE         EEEEEEEE  H E  EEE     EEE
SS_PSSPRED:    HHH HHHHHHHHHHH         EEEEEEEEE        HHHHHHEE         EEEEEEEE        EEEEEEE        EEEE    EEE
DO_DISOPRED3:                                         DDDDD                                                        
DO_SPOTD:                                                                                                          
DO_IUPRED2A:            DDDDD        D DDD DD              DD                                                      

                       10        20        30        40        50        60        70        80        90     
AA:            LRKALDFEEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEITVAVFSVSDADSGHNQQVICSIENNLPFLLRPSVENFYT 400
gnomAD_SAV:       P N  KM  CHM # DA R D P T   L#  #E K  DS  ILL  TNHNL   TDTPMELL#   T   Y HKI   TK  FL P  #       
Conservation:  4100566902015031426183334243324042527376716342332322062861132243553418163415333133422236615322124452
SS_PSIPRED:    E         EEEEEEEEEEE      EEEEEEEEEE      EEEEEE            EEEEEEEE        EEEEE      EEE       EE
SS_SPIDER3:    E       EE EEEEEEEEEE    EEEEEEEEEEEE       EEEEE            EEEEEEE         EEEEE      EE       EEE
SS_PSSPRED:    EE         EEEEEEEEE       EEEEEEEEEEE     HHHHHHHH         EEEEEEEEE        EEEEE            HHHHHH
DO_DISOPRED3:                                          D D DDD  D                                                  
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            LVTEGALDRESRAEYNITITVTDLGTPRLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTYSLLPPQDPHLPLSS 500
BenignSAV:                                                  A                                                      
gnomAD_SAV:    P   #  N KN TQH  IVMI N EA  PQ L* T MRAF #KVK   V EI   PLILKDH RT  #A#LGVAV    TY#  N    L *NR MSVA 
Conservation:  6232027866012253534231535262322121415141645552516121221313142212220321114031414131021111011010000110
SS_PSIPRED:    E              EEEEEEEE      EEEEEEEEEEE            EEEEEEE       EEEEEEEE        EEEEEE          EE
SS_SPIDER3:    EEE          E  EEEEEEE        EEEEEEEEEE         EEEEEEEEE      EEEEEEEEE     EEEEEEEEE            
SS_PSSPRED:    HH              EEEEEE          EEEEEEEEE           EEEEEEEE       EEEEEE         EEEEE           EE
DO_DISOPRED3:                                             D                                                        
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                     D                                DDD             DD              D
CARBOHYD:                     N                                                                                    

                       10        20        30        40        50        60        70        80        90     
AA:            LVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVRLLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWL 600
gnomAD_SAV:    RLF  G KS  LV M  #C VR ASD L  VAHH#F G  #QVQ GVRM HVK SP L F A  KS    A*   WV GSS P I     N  ##H S  
Conservation:  1211211122222111332411212120213121222131311221214131344221221321111131211211021120221121303021402212
SS_PSIPRED:    EEEEE     EEEEE   HHHHEEEEEEEEEE         EEEEEEEEE                                EEEEEEEEE    HHHHH
SS_SPIDER3:    EEEEE     EEEEE   H  HHEEEEEEEEEE        EEEEEEEEE       EEE          H E         EEEEEEEE      HHHH
SS_PSSPRED:    EEEEE    HHHHHHHH HHHHHHHEEEEEEE        HHHHHEEEEE                                EEEEEEEEE    HHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                                      N                                   

                       10        20        30        40        50        60        70        80        90     
AA:            SYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFL 700
BenignSAV:                                        Q                                                                
gnomAD_SAV:    **# IR   FSPLRLCE I GGS# SM R#Q E  Q    VARG  KA#C  S A RLP  ES  *T#     V R   ##NPFII*   E  L L  VF
Conservation:  2314111112223120011422011112213110221214132313212102211203122322113111111110000111013111202101110121
STMI:                                                                                                  MMMMMMMMMMMM
SS_PSIPRED:    HHEE         EEE    EEEE HH  HHH    EEEEEEEE       EEEEEEEEEE                HH     HHHHHHHHHHHHHHHH
SS_SPIDER3:    HHHHH       EEEE     EEE E   H HHHH  EEEEEEE  E   EEEEEEEEEEE                      HHHHHHHHHHHHHHHHH
SS_PSSPRED:    HHHHHH       EEE    EEE      HHHHHHHEEEEEEEE        EEEEEEEEE                       HEHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                                D                     
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90    
AA:            FSVLLFVAVRLCRRSRAASVGRYSVPEGPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFPPQGTEREMEETPTSRNSFPFS 794
BenignSAV:                                                   H                            D                  
gnomAD_SAV:    L#M QLMG #RR  N T    PC#G # #  # QMGLRR ES   R  *EM   RD  I    Y  T   KLS *D   GT  IH#PW N R  
Conservation:  1112211110211101110000011111111221232110212121111121101101112011111110000000000000000000001000
STMI:          MMMMMMMMM                                                                                     
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHH                           EE EEEE        EEE                              
SS_SPIDER3:    HHHHHHHHHHH  H HHH                      EEE   EEEEEEE       EEEE  E                           
SS_PSSPRED:    HHHHHHHHHHHHH                    EEE             EEE                                          
DO_DISOPRED3:                                                                      DDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                               DDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                      D                                     DDDDDDDDDDDDDDDDDDDD