Q9Y5E4  PCDB5_HUMAN

Gene name: PCDHB5   Description: Protocadherin beta-5

Length: 795    GTS: 2.331e-06   GTS percentile: 0.761     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 2      gnomAD_SAV: 550      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            METALAKTPQKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELATRGARMHYKGNKELLQLDIKTGNLLLYEKLDREVMCGATE 100
gnomAD_SAV:    T SV   S   K  TV D   F # S  V  K  MR  I G   AGT     SF  EGVVI# VG Y  A  #F H  TE S  F H    W#MT  V K
Conservation:  3000000000167511323120110200000162417711222252441134432012510622341221110161520043262404247672593124
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                      
SS_PSIPRED:       HHHH   HHHHHHHHHHHHHHHH         HHH    EEHHHHHHH    HHHHHH  EEEEE   EEEEEE      EEE     HHHH     
SS_SPIDER3:        H     HHHHHHHHHHHHHHHH    EEEE HHH     EEHEHHHH    HHHHHH  EEEEEE  EEEEEE      EEE  E  HHHH     
SS_PSSPRED:              HHHHHHHHHHHHHHHH                 HHHHHHHHH   HHHHHH   EEEE    EEEEE      EEE     HHHH     
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                         
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDD                                                                             
DO_IUPRED2A:   DDD                                                                                                 

                       10        20        30        40        50        60        70        80        90     
AA:            PCILHFQLLLENPVQFFQTDLQLTDINDHAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHVATHNRGDGRKYPELVLDKAL 200
BenignSAV:                                                            T                                            
gnomAD_SAV:      V    #VI      S   R   ## A SRG    K F   A NI   S     T *  GV    #R C    D*Y PF #  SE D T   P#   G 
Conservation:  4833286545229334311250517498428191213315463932125116251072928260635228151131262413100123122536452218
SS_PSIPRED:     EEEEEEEEE     EEEEEEEEE             EEEE         EEE              EEEEE     EEEEEEE       EEHH     
SS_SPIDER3:     EEEEEEEEE    EEEEEEEEEEE             EEEE        EEE   E         EEEEEEE    EEEEEEE     EE EEEE    
SS_PSSPRED:      EEEEEEEEE  EEEEEEEEEEEEE           EEEEE                           EEE      EEEE         HHHHHH   
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                             DDD    DDDDDDDD                                    DD  DDD         D DD   
CARBOHYD:                                                                          N                               

                       10        20        30        40        50        60        70        80        90     
AA:            DREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSFYEVQVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQGDEVTQPFVIDEKTAEI 300
gnomAD_SAV:     W  QSQ#N P    NS T    R  # LF #ME DNK# K   PSC ARG K  # TC  AI P    G # HE ADCTV    D  R LA   #IG  
Conservation:  7372112316362729562624343305161428368737281201613232941112304314270819251351419253321120226143103824
SS_PSIPRED:          EEEEEEEEE        EEEEEEEEEE            EEEEE         EEEEEEEE       EEEEEEEE        EEE     EE
SS_SPIDER3:          EEEEEEEEEE     EEEEEEEEEEEE            EEEEEE        EEEEEE  E       EEEEEEE        EEE     EE
SS_PSSPRED:    HHHH  HHHEEEEEE         EEEEEEEEEE           EEEEE        EEEEEEEEEE      EEEEEEEE         EE     EE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:            DDDDDDDD D      DDDDDD                                                                     
MODRES_A:                                                                                                     K    

                       10        20        30        40        50        60        70        80        90     
AA:            RLKRALDFEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENAPETVVAVFSVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFY 400
gnomAD_SAV:    L  K  #   IAHNSM VA  GR S    Y   #   V   K  A ## #F  SI K VRV    I    HL  RN#  I   N    LLR     N  S
Conservation:  0410056690201503142618333424332404252737671634233232206286113224355341816341533313342223661532212445
SS_PSIPRED:    EE          EEEEEEEEEE     EEEEEEEEEEE      EEEEEE            EEEEEEEE        EEEEE      EEE       E
SS_SPIDER3:    EEEEE       EEEEEEEEEE     EEEEEEEEEEE       EEEEE           EEEEEEEEE        EEEEE      EE E     EE
SS_PSSPRED:    EE           EEEEEEEEE      EEEEEEEEEE       EEEEE           EEEEEEEEE         EEEE          HHHHHHH
DO_DISOPRED3:                                            DDDDDDDDDDDDDD D                                          
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                               DDDDDDDDDDDD     DDDDDDDDD        D                     

                       10        20        30        40        50        60        70        80        90     
AA:            TLVTQRTLDRESQAEYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQNPHLRLA 500
gnomAD_SAV:    N  A K  #G  H KHST V    L RLK    RKLMA     S  VSPVSRI  NM LGD SGL#  VR  #PA SE DNK  IIH#  QSEDTY PP 
Conservation:  2623202786601225353423153526232212141514164555251612122131314221222032111403141413102111101101000011
SS_PSIPRED:    EE            EE EEEEEEE      EEEEEEEEEEE            EEEEEEE       EEEEEEEE        EEEEEE          E
SS_SPIDER3:    EE E      H   E  EEEEEEE        EEEEEEEEE          E EEEEEEE      EEEEEEEEE     EEEEEEEEE           
SS_PSSPRED:    HHH      HHH     EEEEEE          EEEEEEEEE           EEEEEEEE       EEEEE          EEEEE            
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                D    D     D          D D                              DDDDDD        DDDDDD            
CARBOHYD:                      N                 N                                                                 

                       10        20        30        40        50        60        70        80        90     
AA:            SLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAW 600
gnomAD_SAV:    P   NSTE DRMLT   P  VD K# # LLV  EPRFS PGR#S  HLV R#TSYS*  MP    K     NKV S TTKL  V        #ELDLK# 
Conservation:  0121121112222211133241121212021312122213131122121413134422122132111113121121102112022112130302140221
SS_PSIPRED:    EEEEEE     EEEEE   HHHHHEEEEEEEEE         EEEEEEEEE                                EEEEEEEEE    HHHH
SS_SPIDER3:     EEEEE     EEEEE   HHHHH  EEEEEEEE        EEEEEEEEE       EE           EEE         EEEEEEEE      HEE
SS_PSSPRED:    EEEEEE    HHHHHHHHHHHHHHHHHEEEEEE         EEEEEEEEE                                EEEEEEEEE    HHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   D                                                                      DD                           
CARBOHYD:                                                                       N                                  

                       10        20        30        40        50        60        70        80        90     
AA:            LSYQLLKATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLF 700
gnomAD_SAV:       P  ET Q    G#  # RQ##  SQ R#S V RQGV# PFQ   * QC* I   QL  AE# # S# RPRQV AS    NLFALCMLAPF L   FL
Conservation:  2231411111222312001142201111221311022121413231321210221120312232211311111111000011101311120210111112
STMI:                                                                                                   MMMMMMMMMMM
SS_PSIPRED:    HHHEE        EEEE     EE      HHHH   EEEEEEEE       EEEEEEEEEE                HH     HHHHHHHHHHHHHHH
SS_SPIDER3:    EEEEE       EEEEE     EEE E      HHH  EEEEEEE  E   EEEEEEEEEEE                      HHHHHHHHHHHHHHHH
SS_PSSPRED:    HHHHHHH       EEE    EEE      HHHHHHHEEEEEEEE        EEEEEEEEE                       HEHHHHHHHHHHHHH
DO_DISOPRED3:                                                                              DD DD                   
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            LFSVLLFVAVRLCRRSRAASVGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLLPQGAGEEIGKTAAFRNSFGLN 795
BenignSAV:                        P                                                                           
gnomAD_SAV:       A#  M AW R  N TT   GYLLTG R T YM GLRD    P  CQ*K S  RN*  V  N Q*QT S #   SS  DT    T #   RF 
Conservation:  11111211110211101110000011111111221232110212121111121101101112011111110000000000000000000001000
STMI:          MMMMMMMMMM                                                                                     
SS_PSIPRED:    HHHHHHHHHHHHHHHH                               EE EEEE        EEE                              
SS_SPIDER3:    HHHHHHHHHHHH  H HHH               E        E   EEEEEEE        EE                H    H         
SS_PSSPRED:    HHHHHHHHHHHHH                     EEE             EEEE                                         
DO_DISOPRED3:                                                                       DDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                                 DDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A: