Q9Y5E7  PCDB2_HUMAN

Gene name: PCDHB2   Description: Protocadherin beta-2

Length: 798    GTS: 2.158e-06   GTS percentile: 0.709     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 4      gnomAD_SAV: 482      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MEAGEGKERVPKQRQVLIFFVLLGIAQASCQPRHYSVAEETESGSFVANLLKDLGLEIGELAVRGARVVSKGKKMHLQFDRQTGDLLLNEKLDREELCGP 100
gnomAD_SAV:     Q  A  #G R R *D  L  F V##E   H #   LP          S   NQ   M      RG  #  V EIR   NG   YF  K   GPK  #SL
Conservation:  3000000000001675113231201102000001624177112222524411344320125106223412211101615200432624042476725931
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                      
SS_PSIPRED:                HHHHHHHHHHHHHHHH         HHH    EEHHHHHHH    HHHHHH  EEEEE    EEEEE      EEE     HHHHH  
SS_SPIDER3:                 HHHHHHHH HHHHHH    EEE  EHE    EEEEEHHHH    HHHHHH   EEEE   EEEEEE      EEE     HHHH   
SS_PSSPRED:                 HHHHHHHHHHHHHHH         HHH     HHHHHHHHH   HHHHHH   EEEE     EEEE      EEE     HHHH   
DO_DISOPRED3:  DDDDDDDDDDBBBBBBBBDDDDDDDDDDD                                                                       
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDD                                                                              
DO_IUPRED2A:   DDDDDDD                                                                                             

                       10        20        30        40        50        60        70        80        90     
AA:            TEPCVLPFQVLLENPLQFFQAELRIRDVNDHSPVFLDKEILLKIPESITPGTTFLIERAQDLDVGTNSLQNYTISPNFHFHLNLQDSLDGIILPQLVLNR 200
BenignSAV:                                I                                                                        
gnomAD_SAV:     VL   T *  V    E   V*    VI   FA    R  PS F  N  AR  LIT #D  W ARID#F Y##   S Q   K   G  AKM TK     
Conservation:  2448332865452293343112505174984281912133154639321251162510729282606352281511312624131001231225364522
SS_PSIPRED:        EEEEEEEEE   EEEEEEEEEE             EEEEE        EEE              EEEEE     EEEEEEE       EEEHH  
SS_SPIDER3:       EEEEEEEEE    EEEEEEEEEEE           EEEEEE        EEE               EEE      EEEEEEE     EE EEE   
SS_PSSPRED:        EEEEEEEEE   EEEEEEEEEEE            EEEEE        EE                  EE     EEEEE         HHHHHHH
DO_DISOPRED3:                                    DDDD                                                              
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                                            N                             

                       10        20        30        40        50        60        70        80        90     
AA:            ALDREEQPEIRLTLTALDGGSPPRSGTALVRIEVVDINDNVPEFAKLLYEVQIPEDSPVGSQVAIVSARDLDIGTNGEISYAFSQASEDIRKTFRLSAKS 300
gnomAD_SAV:    P #P A   TG I AV G R R WC#M#Q PT    #S D RDLG   C MH ADN TI   A MAAD N GV# D#*MP   C P#  VGRK   T  L
Conservation:  1873721123163627295626243433051614283687372812016132329411123043142708192513514192533121120226143103
SS_PSIPRED:            EEEEEEEEE        EEEEEEEEEE            EEEEE         EEEEEEEE        EEEEEEE   HHHHH EEE    
SS_SPIDER3:            EEEEEEEEEE     EEEEEEEEEEEEE          E EEEEE        EEEEEEE         EEEEEEE   H H   EEE    
SS_PSSPRED:    HHHHHH  HHHHHHHHH         EEEEEEEEEE           EEEEE        EEEEEEEEE       EEEEEEEE   HHHHHHH      
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:               DDDDDD                                                                                  
MODRES_A:                                                                                                        K 

                       10        20        30        40        50        60        70        80        90     
AA:            GELLLRQKLDFESIQTYTVNIQATDGGGLSGTCVVFVQVMDLNDNPPELTMSTLINQIPENLQDTLIAVFSVSDPDSGDNGRMVCSIQDDLPFFLKPSVE 400
gnomAD_SAV:    R M  G  M     R      *VA R   C   ML     G HHS A   VP  TS   Q    I  T  T  E  TR KESI  FT AE S    L I 
Conservation:  8240410056690201503142618333424332404252737671634233232206286113224355341816341533313342223661532212
SS_PSIPRED:     EEEE         EEEEEEEEEEE     EEEEEEEEEEE      EEEEEE            EEEEEEEE        EEEEE      EEEEE   
SS_SPIDER3:      EEE EE       EEEEEEEEEE     EEEEEEEEEEE      EEEEEE           EEEEEEEE         EEEEE      EE  E   
SS_PSSPRED:      EEEE         EEEEEEEEE       EEEEEEEEEE       HHHHH            EEEEEEEE         EEEE            HH
DO_DISOPRED3:                                                D DDD  D                                              
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                    DD DDD                          D                  

                       10        20        30        40        50        60        70        80        90     
AA:            NFYTLVISTALDRETRSEYNITITVTDFGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHL 500
gnomAD_SAV:     LC    R  PYG    KNS    I   R A    K YVIEQIP I   VST  HI   QLL## S   VD CG#  K G  DI  R     P#S#NL  
Conservation:  4452623202786601225353423153526232212141514164555251612122131314221222032111403141413102111101101000
SS_PSIPRED:      EEE             EEEEEEEEE       EEEEEEEEEE            EEEEEEE       EEEEEEEE        EEEEEE        
SS_SPIDER3:     EEEEEE          E EEEEEEEE       EEEEEEEEEE          E EEEEEEE      EEEEEEEEE      EEEEEEEE        
SS_PSSPRED:    HHHHHHH             EEEEEE          EEEEEEEEE           EEEEEEEE       EEEEEE         EEEEE         
DO_DISOPRED3:                                                  D                                                   
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                          DDDDDD        DDDDDD         
CARBOHYD:                         N                 N                                                              

                       10        20        30        40        50        60        70        80        90     
AA:            PLASLVSINADNGHLFALQSLDYEALQAFEFRVGAADRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQ 600
BenignSAV:                                        T                                                                
gnomAD_SAV:    SFV    V# YSD# L    P      E D H#  TYPRAL   R*  L L   GT    RL      KSP  W KP L#   LD VAI   VM R  D 
Conservation:  0110121121112222211133241121212021312122213131122121413134422122132111113121121102112022112130302140
SS_PSIPRED:      EEEEEEE     EEEEE   HHHHHEEEEEEEE          EEEEEEEEE                                EEEEEEEEE    H
SS_SPIDER3:      E EEEEE     EEEEE   HHHHHH EEEEEEEE        EEEEEEEEE       EEE          E E         EEEEEEEE      
SS_PSSPRED:      EEEEEEE    HHHHHHHHHHHHHHHHHHEEEE     HHH  EEEEEEEEE                                EEEEEEEEE    H
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:      D                                                                      D                         
CARBOHYD:                                                                          N                               

                       10        20        30        40        50        60        70        80        90     
AA:            NAWLSYQLLKATEPGLFGVWAHNGEVRTARLLRERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLLLPEAAPAQAQADLLTVYLVVALASVS 700
BenignSAV:                                                                              P                          
gnomAD_SAV:     VC       D  LEVL A VQS  M SS   SQSET  H# L    #  K RCLT V PQ# PME      VP L  V T    YF  DC    # PM 
Conservation:  2212231411111222312001142201111221311022121413231321210221120312232211311111010000011101311120210111
STMI:                                                                                                      MMMMMMMM
SS_PSIPRED:    HHHHHHEE        EEEE     EEE HHHHHHH    EEEEEEEE       EEEEEEEEEE                HH    HHHHHHHHHHHHH
SS_SPIDER3:    HHHHHHHEH       EEEE    EEEE EE     HHH  EEEEEEE  E   EEEEEEEEEEE           H   H      HHHHHHHHHHHHH
SS_PSSPRED:    HHHHHHHHHH       EEEE    EE      HHHHHHHHEEEEEEE        EEEEEEEEE                       EEEHHHHHHHHH
DO_DISOPRED3:                                                                                    D                 
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            SLFLFSVLLFVAVRLCRRSRAASVGRCSVPEGPFPGQMVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFVAQGAERVSEANPSFRKSFEFT 798
BenignSAV:                                                                D                                      
gnomAD_SAV:     PL SL FP  E #    RTS    CY#M KV# S HL   N     F    *   V  C W      P LM  SLFV C   FN T  G T N K P
Conservation:  11211111211110211101110000011111111221232110212121111121101101112011111110000000000000000000001000
STMI:          MMMMMMMMMMMMM                                                                                     
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHH                               EE EEEE        EEE              HH              
SS_SPIDER3:    HHHHHHHHHHHHHHH HH HH                         E   EEEEEEEE       EEE  E           HH HH           
SS_PSSPRED:    HHHHHHHHHHHHHHHH                      EE             EEEE                        HHHH             
DO_DISOPRED3:                                                                          DDDDDDDDDDDDDDDDDDDDDDD DD
DO_SPOTD:                                                                                     DDDDDDDDDDDDDDDDDDD
DO_IUPRED2A: