Q9Y5F0  PCDBD_HUMAN

Gene name: PCDHB13   Description: Protocadherin beta-13

Length: 798    GTS: 2.846e-06   GTS percentile: 0.878     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 1      gnomAD_SAV: 587      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHT 100
gnomAD_SAV:     KVNR  S G##HAF   FF     V V  # N  A QK  SI L SS    R P   K  G#   I C  K    R#S Q EGS  Y R G     V  
Conservation:  3100000000067501133120110200100016241771122225244113443211251062234122111016152004326240424767259312
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                        
SS_PSIPRED:             HHHHHHHHHHHHHHHHHH         HHH      HHHHHHH    HHHHHH  EEEEE   EEEEEE      EEE     HHHHH   
SS_SPIDER3:             HHHHHHHHHHHH HHHH     EEEEEHHH    EHHHHHHHHH   HHHHHH   EEEEE  EEEEEE      EEE     HHHH    
SS_PSSPRED:             HHHHHHHHHHHHHHHHH           EE     HHHHHHHHH   HHHHHH   EEEE     EEE    HHHHHHH    HHHH    
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                        
DO_SPOTD:      DDDDDDDDDD DDDDDDDD                                                                                 
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            EPCVLRFQVLLESPFEFFQAELQVIDINDHSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFRVLTRKRSDGRKYPELVLDKA 200
gnomAD_SAV:    Q YMRP         A  #  P    V VRPT   GE  S EL# RCLLR MSL QI#*  EIV  HS Y V RL FS QI  S HR A  *     NNV
Conservation:  4483328654522933431125051749842819121331546393212511625107292826063522815113126241310012312253645221
SS_PSIPRED:      EEEEEEEEE     EEEEEEEEEE            EEEEE                         EEEEE     EEEEEEE     EEEEHHH   
SS_SPIDER3:      EEEEEEEEEE   EEEEEEEEEEE         H EEEEEE        EEE              EEEEE     EEEEEEE     EE  EEE   
SS_PSSPRED:       EEEEEEEEE   EEEEEEEEEEEE           EEEEEE                                   EEEEE        HHHHHH H
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                 D  DDDDDDDDDDD                                        

                       10        20        30        40        50        60        70        80        90     
AA:            LDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTG 300
gnomAD_SAV:    P     V PG AF#PV##V Q K R  *  V*I Y  N VS VQ*  C  *  D   IA   AE  DME  A  D#   H# LL           # F E
Conservation:  7737211231636272956262434330516142836873728120161323294111230431427081925135141925331111202261431038
SS_PSIPRED:           EEEEEEEEE        EEEEEEEEEE            EEEEEEE       EEEEEEEE        EEEEEEE    HHHH EEE     
SS_SPIDER3:           EEEEEEEEEE     EEEEEEEEEEEEE       E   EEEEEE        EEEEEEEE       EEEEEEEE    HH   EEE     
SS_PSSPRED:    HHHHHHHHHHHHHHHH         EEEEEEEEEEE           EEEEEE      EEEEEEEEE        EEEEEE    HHHHH         
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:              DDDDD D                            D                                                     

                       10        20        30        40        50        60        70        80        90     
AA:            EIELKKQLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVVALFSVSDLDSGENGKISCSIQEDLPFLLKSAENF 400
gnomAD_SAV:     T#P   #V V#F C  ITM P  GAIS   R I   LT  SGD     K EL    S KG  A  E #   # H   HE  CYP  DN  LFP  EAK 
Conservation:  2404110566902015131426183334243324042527376716342332322062861132243553418163415323132422236615321244
SS_PSIPRED:    EEEE          EEEEEEEEEE     EEEEEEEEEEE      EEEEEE            EEEEEEEE        EEEEE      EEEEE    
SS_SPIDER3:    EEEE EE  H  EEEEEEEEEEEE     EEEEEEEEEEE       EEEEE           EEEEEEEEE     E  EEEEEE     EEE E   E
SS_PSSPRED:    EEEE     HHH  EEEEEEEEEE       EEEEEEEEEE      EEEEE           EEEEEEEEE         EEEE        HHHHHHH
DO_DISOPRED3:                                               D  DD  D                                               
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                    D DDDDD                                            

                       10        20        30        40        50        60        70        80        90     
AA:            YTLLTERPLDRESRAEYNITITVTDLGTPMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTYSLLPPQDPHLPL 500
BenignSAV:                                                                           G                             
gnomAD_SAV:    #IIPM  # Y  N#V  # A    GF ALV #R# DV L  ## D KP # IE   IPLL#* S  #R NSRL #A      KS  N W P# HN#N S 
Conservation:  5262320278670122535342315352623231213141516465525161212313131523122203211140314141220211110211000112
SS_PSIPRED:    EEE               EEEEEEE      EEEEEEEEEEE            EEEEEEE       EEEEEEEE        EEEEE           
SS_SPIDER3:    EEEEE          E  EEEEEEE        EEEEEEEEE          E EEEEEEE       EEEEEEEE      EEEEEEEE          
SS_PSSPRED:    HHHHH             EEEEEE           EEEEEEEEE          EEEEEEEE       EEEEE          EEEEE           
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                 D                                                      DDDDDD        DDDDDD           
CARBOHYD:                       N                 N                                                                

                       10        20        30        40        50        60        70        80        90     
AA:            TSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPALSSEALVRVVVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
gnomAD_SAV:    AT AFVTT #S  SV S P  QT  RLH L#SST RRFST  R*T L L#M ES#E LL LP L  SS    PKM LWE *LACP AE       LV* S
Conservation:  0112112112311211113424112121202131212221313111212141312442212313211111311112120111102311215040314123
SS_PSIPRED:    EEEEEEE     EEEEE   HHHH EEEEEEEEE         EEEEEEEEE       EE                       EEEEEEEEE    HHH
SS_SPIDER3:      EEEEE     EEEEE   HHHHHH EEEEEEEE        EEEEEEEEE       EEE          E E E       EEEEEEEE      HE
SS_PSSPRED:     EEEEEE    HHHHHHHHHHHHHHHH EEEEEE    HHH  EEEEEEEEE                                EEEEEEEEE     HH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:    D                                                                      DD                          
CARBOHYD:                                                                        N                                 

                       10        20        30        40        50        60        70        80        90     
AA:            WLSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPEAAPTQAQADLLTVYLVVALASVSSL 700
gnomAD_SAV:    R WS    SSVP# # L#V   VGP S   R G#V  Q Q  VI  D DTLC   GS QLIVAEC   S  RITKP LAKGE NM#S   LMT  #E L 
Conservation:  1223141111112231101112221111122131112213141323132121121112031223221131211110100001120131112121010111
STMI:                                                                                                    MMMMMMMMMM
SS_PSIPRED:    HHHHEE         EEE     EEE HH HHHH    EEEEEEEE       EEEEEEEEEE                     HHHHHHHHHHHHHHHH
SS_SPIDER3:    HHHHHH        EEEE     EEE EE     HHH  EEEEEEE  E   EEEEEEEEEEE                     HHHHHHHHHHHHHHHH
SS_PSSPRED:    HHHHHHHH       EEE    EEE      HHHHHHHEEEEEEEE        EEEEEEEEE                       EEEHHHHHHHHHHH
DO_DISOPRED3:                                                                           D   DDDD                  D
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            FLFSVLLFVAVRLCRRSRAASVGRCLVPEGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPPQCPGKEIQGNSTFPNNFGFNIQ 798
gnomAD_SAV:     VL#MF LL LL GKM  ##LMVLWS SA AF  #PE##RS K    I  CK   E   #A *L VPE# F Y S L S  * E       #L  D *
Conservation:  12111221111011110111000001111111122122211121212121122110110111200111211000000000000000000000100000
STMI:          MMMMMMMMMMM                                                                                       
SS_PSIPRED:    HHHHHHHHHHHHHHHHH                               EE EEEE        EEE                                
SS_SPIDER3:    HHHHHHHHHHHHH HH HH                 E      E    EEEEEEEE      EEE   E                             
SS_PSSPRED:    HHHHHHHHHHHHHH                                     EEEE                                           
DO_DISOPRED3:                                                                        DDBBBBBBBDDDDDDDDDDDDDD DBBB
DO_SPOTD:                                                                                   DDDDDDDDDDD       DDD
DO_IUPRED2A:                                        D                                           D