Q9Y5F1  PCDBC_HUMAN

Gene name: PCDHB12   Description: Protocadherin beta-12

Length: 795    GTS: 2.533e-06   GTS percentile: 0.814     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 2      gnomAD_SAV: 624      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MENGGAGTLQIRQVLLFFVLLGMSQAGSETGNFLVMEELQSGSFVGNLAKTLGLEVSELSSRGARVVSNDNKECLQLDTNTGDLLLREMLDREELCGSNE 100
gnomAD_SAV:       V   I  T   P# L W  VP*   A A   M    L RR  E VV   RFQE#K   #W P   H #NKY H N#S  Y   KQ   G GFY  KD
Conservation:  3110000000067511323120110200000162417711222252441134432012510622341221110161520043262404247672593024
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSS                                                                          
SS_PSIPRED:            HHHHHHHHHHHHHHHHHH        HHHH    EEHHHHHHH    HHHHHH   EEEE    EEEEE      EEE     HHHHH    
SS_SPIDER3:              HHHHHHHHHH  HHH     EEEE HHH     HHHHHHHHH   HHHHHH   EEEE     EEEE      EEE     HHHH     
SS_PSSPRED:              HHHHHHHHHHHHH             E      HHHHHHHHH   HHHH     EEEE     EEE       EE      HHHH     
DO_DISOPRED3:  DDDDDDDDDDDDDDDBDDDDDDDDDDD                                                                         
DO_SPOTD:      DDDDDDDDDDDDDDDDDDD                                                                                 
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            PCVLYFQVLMKNPTQFLQIELQVRDINDHSPVFLEKEMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTINPNSHFHVKIRVNPDNRKYPELVLDKAL 200
gnomAD_SAV:    T      A #Q SMR S    #L YV G  T    EQR    TGD #  V   V  TN      SV   H T  SF# QI VK S Y    A  I  *  
Conservation:  4833286545229334311250517498428191213315463932125116251072928260635218151131262413100023122536452218
SS_PSIPRED:     EEEEEEEEE    EEEEEEEEEEE            EEEEE        EEE              EEEEE     EEEEEEE     EEEEEHH    
SS_SPIDER3:     EEEEEEEEE     EEEEEEEEEE           EEEEEE        EEE    E         EEEE E    EEEEEEE     EEE EEE    
SS_PSSPRED:      EEEEEEEEE   EEEEEEEEEEEE       HHHHEEEEEE       EEE             EEEEEE     EEEEE         HHHHHH HH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            DYEERPELSFILTALDGGSPPRSGTALVRVVVVDINDNSPEFEQAFYEVKILENSILGSLVVTVSAWDLDSGTNSELSYTFSHASEDIRKTFEINQKSGD 300
gnomAD_SAV:        LLQFG F P   DRFA    ND F LMI YT#ES  D#Q G S   VV# NL C PI NIL C SE V KGKIC # PRVPK##  S  VHHN  E
Conservation:  7372112316362729562624343305161428368737281201613232941112304314270819251351419253312112022614310382
SS_PSIPRED:          EEEEEEEEE        EEEEEEEEEEE           EEEEEEE       EEEEEEEE       EEEEEEEE   HHHHH EEE     E
SS_SPIDER3:          EEEEEEEEEE     EEEEEEEEEEEEE           EEEEEE        EEEEEEE        EEEEEEEE   HHHH  EEE     E
SS_PSSPRED:    HHH   HHHHHEHHH         EEEEEEEEEE            EEEEEEE      EEEEEEEE        EEEEEEE    HHHHHH        
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            ITLTAPLDFEAIESYSIIIQATDGGGLFGKSTVRIQVMDVNDNAPEITVSSITSPIPENTPETVVMVFRIRDRDSGDNGKMVCSIPEDIPFVLKSSVNNY 400
gnomAD_SAV:     S  #S    TVK C T      R       I I H TV    T    A TLA Q A D  D#AI#I STPNG CE KAETG#  LQNS  LV CTGS D
Conservation:  4041005669020150314261833342433240415273767163423323220627611322435534181634153231334222366153221244
SS_PSIPRED:    EEE         EEEEEEEEEEE     EEEEEEEEEE       EEEEEE            EEEEEEEE        EEEEE      EEEEE     
SS_SPIDER3:    EEE          EEEEEEEEEE      EEEEEEEEEE       EEEEE           EEEEEEE          E EEE      EEEEE    E
SS_PSSPRED:    EEE      EEEEEEEEEEEEE       EEEEEEEEEE       EEEEE           EEEEEEEEE         EEEE       EEE      
DO_DISOPRED3:                                              D  D   D                                                
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                  DDDDDDDDD          DDD          DD                   

                       10        20        30        40        50        60        70        80        90     
AA:            YTLETERPLDRESRAEYNITITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYALFVRENNSPALHIGSISATDRDSGTNAQVNYSLLPSQDPHLPL 500
BenignSAV:                        I                                                                                
gnomAD_SAV:    C#F IK T    T  Q  #IV I N  N#GV AKRI# LPA#E #  T TLI*AF V LL#K IR    TRRV## Y   S H#HAT #P #P NLYR# 
Conservation:  5262320278660122535342315352623221214151416455525161212213131422122203211140314141310211110110100000
SS_PSIPRED:    EEE               EEEEEEE      EEEEEEEEEEE            EEEEEEE       EEEEEEEE        EEEEEE          
SS_SPIDER3:    EEEEE          E  EEEEEEE        EEEEEEEEE            EEEEEEE      EEEEEEEEE     EEEEEEEEE          
SS_PSSPRED:    EEEE              EEEEEE          EEEEEEEEE           EEEEEEEE       EEEEE          EEEEE           
DO_DISOPRED3:                                                DD  DD                                                
DO_SPOTD:                                                                                                          
DO_IUPRED2A:      DDD D   D DD    D                D D                              DDDDDD        DDDDDD           
CARBOHYD:                       N                 N                                                  N             

                       10        20        30        40        50        60        70        80        90     
AA:            ASLVSINADNGHLFALRSLDYEALQGFQFRVGATDHGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPWAAEPGYLVTKVVAVDGDSGQNA 600
gnomAD_SAV:    T   # ST   NQ DF *V   S  ESE CM #SGQ#YQ SG ##R #LVM ET EK#L # DR L S SL I #MSL# KTV   I L VM#S   * S
Conservation:  0012112111222221113324112121202131212221313112212141313442212200011111312112110211202211213030214022
SS_PSIPRED:    EEEEEEE     EEEEE   HHHH EEEEEEEEE         EEEEEEEEE                                EEEEEEEEE    HHH
SS_SPIDER3:    E EEEEE     EEEEE   H  HEEEEEEEEEEE        EEEEEEEEE       EEE          E E         EEEEEEEE      HH
SS_PSSPRED:    EEEEEEE    HHHHHHHHHHHHHHH  EEEEEE    HHH  EEEEEEEEE                               EEEEEEEEEE    HHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                                        N                                 

                       10        20        30        40        50        60        70        80        90     
AA:            WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSL 700
gnomAD_SAV:    * W*EP    DL  LRL* Q  VGH T# P Q#GVS Q PL  D EK   LC D SK Y FP NC  *HF #FAQ  #T V  NL  LC #M ST AW##
Conservation:  1223141111012231200114220111122131102212141323132121022112031223221131111111000110010131112021011101
STMI:                                                                                                    MMMMMMMMMM
SS_PSIPRED:    HHHHEE        EEEE     EEE     HHH    EEEEEEEE       EEEEEEEEEE                HH     HHHHHHHHHHHHHH
SS_SPIDER3:    HHHHHEH      EEEEE E  EEEE E      HHH  EEEEEEE  E   EEEEEEEEEEE                      HHHHHHHHHHHHHHH
SS_PSSPRED:    HHHHHHHH       EEEE   EEE      HHHHHHHEEEEEEEE      HHHEEEEEEEE                       EEEHHHHHHHHHHH
DO_DISOPRED3:                                                                               DD DD                  
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            FLFSVLLFVAVRLCRRSRAAPVGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCVTGGSRSNKFKFLKPIIPNFLPQSTGSEVEENPPFQNNLGF 795
BenignSAV:                                                                   E                                
gnomAD_SAV:     VLW F# #TLWQRKSC #TL  CY MA D  LER#MELG     P*RDR##  GA C # YE    *L     P  RI NG AKSL     VC 
Conservation:  21111221111021110111000001111111122023211021212111112110110101201111111000000000000000000000000
STMI:          MMMMMMMMMMM                                                                                    
SS_PSIPRED:    HHHHHHHHHHHHHHHHH                               EE EEEE        EEE                             
SS_SPIDER3:    HHHHHHHHHHHHHHHH                            E   EEEEEEE         E                              
SS_PSSPRED:    HHHHHHHHHHHHHHH                     EE             EEE                                         
DO_DISOPRED3:                                                                       BDDDDDDDDDDDDDDDDDDBBBBBBB
DO_SPOTD:                                                                                 DDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                                    D   D