Q9Y5F2  PCDBB_HUMAN

Gene name: PCDHB11   Description: Protocadherin beta-11

Length: 797    GTS: 2.653e-06   GTS percentile: 0.842     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 3      gnomAD_SAV: 608      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MENQGTRTQQIRQVLLLFVLLGMSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELSSRGARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIE 100
BenignSAV:        R  H                                                                                             
gnomAD_SAV:    I  RRIH#HH# R PFFII #A    V    R   T  T     A H  RN E  E K PL ET# IP Y   #WR   TI NW  C I VT    #CT 
Conservation:  3110000000067511323120110200000162417711222252441134432012510622341221110161520043262404247672593024
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSS                                                                          
SS_PSIPRED:            HHHHHHHHHHHHHHHHHH         HHH    EEHHHHHHH    HHHHHH   EEEE    EEEEE      EEE     HHHHH    
SS_SPIDER3:              HHHHHHHHHHHHHHH     EEEE HHE     EHHHHHHHH   HHHHHH   EEEE    EEEEE      EEE     HHHH     
SS_PSSPRED:            HHHHHHHHHHHHHHH                    HHHHHHHHH   HHHHH    EEEE     EEEE      EEE     HHHHH    
DO_DISOPRED3:  DDDDDDDDDDDDDDDBDDDDDDDDDD                                                                          
DO_SPOTD:      DDDDDDDDDDDD DDDDD                                                                                  
DO_IUPRED2A:   DDDD                                                                                                

                       10        20        30        40        50        60        70        80        90     
AA:            PCVLHLQVLMQNPTQFLQIELQVRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHIKMRVIPDNRKYPELVLDKAL 200
gnomAD_SAV:    SF# Y  L IK  R*    G H  GTDNQFS  L  ## PK L KC   S I P  GN    RVY A T  T T TRVQMTI   AN K CRKFI E  R
Conservation:  4833286545229334311250517498428191213315463932125116251072928260635218151131262413100023122536452218
SS_PSIPRED:     EEEEEEEEE    EEEEEEEEEE             EEEEE        EEE              EEEEE     EEEEEEE     EEEEHHH    
SS_SPIDER3:     EEEEEEEEE    EEEEEEEEEEE           E EEEE        EEE               EEE E    EEEEEEE     EEE EEE    
SS_PSSPRED:      EEEEEEEEE   EEEEEEEEEEE         HHHEEEEEE       EEE             EEEEEE     EEEEE         HHHHHHHHH
DO_DISOPRED3:                                                               D                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            DYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSPEFEQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGE 300
gnomAD_SAV:     H #RLKFN T T PEDWFLS   AV  #AGI GLHNSFS  K T *VM TP  N F WVSM#FT   SG A   KT* #IF V  Y S    # R*F D
Conservation:  7372112316362729562624343305161428368737281201613232941112304314270819251351419253312112022614310382
SS_PSIPRED:          EEEEEEEEE        EEEEEEEEEEE           EEEEEEE       EEEEEEEE        EEEEEEE   HHHHH EEE     E
SS_SPIDER3:          EEEEEEEEEE     EEEEEEEEEEEEE           EEEEEE        EEEEEEE        EEEEEEEE   HHHH  EEE     E
SS_PSSPRED:    HHH   HHHHEEE           EEEEEEEEEE            EEEEEE      EEEEEEEEE        EEEEEEE    HHHHHH       E
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            ITLRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENTPETVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENY 400
gnomAD_SAV:    T  TT  H    AL P  VKT  WR  VV    #   T  KHK  G#  LP NG VS  MSA M #I   *GMH  # RK  FYLL N#T L# C*IQ  
Conservation:  4041005669020150314261833342433240415273767163423323220627611322435534181634153231334222366153221244
SS_PSIPRED:    EEE         EEEEEEEEEEE      EEEEEEEEEE      EEEEEE            EEEEEEEE        EEEEE      EEEEE     
SS_SPIDER3:    EEE          EEEEEEEEEE      EEEEEEEEEE       EEEEE           EEEEEEEE         EEEEE      EEEEE    E
SS_PSSPRED:    EEE      EEEEEEEEEEEEE       EEEEEEEEEEE      EEEEE           EEEEEEEEE         EEEE       EEE  HHHH
DO_DISOPRED3:                                              D  D   D                                                
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                   DDDDDDD                                             

                       10        20        30        40        50        60        70        80        90     
AA:            YTLETERPLDRESTAEYNITITVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVNYSLLPPQDLHLPL 500
gnomAD_SAV:    H#S    S VG TRVDC# INAL # ET K       AMS  E SN# RAVIEN HNPII#K H TS  #R IC##ETETS KS*ISC#  RS#GPQM# 
Conservation:  5262320278660122535342315352623221214151416455525161212213131422122203211140314141310211110110100000
SS_PSIPRED:    EEE               EEEEEEE       EEEEEEEEEE            EEEEEEE       EEEEEEEE        EEEEEE          
SS_SPIDER3:    EEEEE             EEEEEEE       EEEEEEEEEE          E EEEEEEE      EEEEEEEEE     EEEEEEEEE          
SS_PSSPRED:    HHH              EEEEEEE          EEEEEEEEE           EEEEEEEE       EEEEE          EEEEE           
DO_DISOPRED3:                                               DDD                                                    
DO_SPOTD:                                                                                                          
DO_IUPRED2A:      DDD D   D DD                       DD DDDD                        DDDDDD   D   DDDDD             
CARBOHYD:                       N                 N                                                  N             

                       10        20        30        40        50        60        70        80        90     
AA:            ASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
BenignSAV:                                E                                                                        
gnomAD_SAV:    T  AFN A DR PL  #L   D   G E ##DSS P # VFGR V  SLV PE S SL L  H #R  PSS   PLLGE  LD P I  AV  R      
Conservation:  0012112111222221113324112121202131212221313112212141313442212200011111312112110211202211213030214022
SS_PSIPRED:    EEEEEEE     EEEEE   HHHH EEEEEEEEE         EEEEEEEEE                                EEEEEEEEE    HHH
SS_SPIDER3:      EEEEE     EEEEE   HHHHHH EEEEEEEE        EEEEEEEEE       EEE          E E         EEEEEEEEE     HH
SS_PSSPRED:     EEEEEE    HHHHHHHHHHHHHHHH EEEEEE         EEEEEEEEE                                EEEEEEEEE    HHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                           DD                          
CARBOHYD:                                                                        N                                 

                       10        20        30        40        50        60        70        80        90     
AA:            WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQVLLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSL 700
gnomAD_SAV:      W H   P##HRV#   V S *LG#S  PN#G V  Q VG  I ND   #C# I K HLF   #  * C T S  VQPP *#ELF  #  M  T L  F
Conservation:  1223141111012231200114220111122131102212141323132121022112031223221131111111000110010131112021011101
STMI:                                                                                                    MMMMMMMMMM
SS_PSIPRED:    HHHHEE         EEE     EEE     HHH    EEEEEEEE       EEEEEEEEEE                HH     HHHHHHHHHHHHHH
SS_SPIDER3:    HHHHHEH      EEEEE     EEEEE      H H  EEEEEEE  E   EEEEEEEEEEE                      HHHHHHHHHHHHHHH
SS_PSSPRED:    HHHHHHHH       EEEE   EEE      HHHHHHHEEEEEEEE      HHHHHHHEEEE                       EEHHHHHHHHHHHH
DO_DISOPRED3:                                                                               DD D                   
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            FLFSVLLFVAVRLCRRSRAASVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPNIQAKGLGKNSEENSTFRNSFGFNF 797
gnomAD_SAV:      L  FPL#V  Q  KRSE#WA R  MSEDRS AQ  # T SR  F RCL**AG SRSYKI D #   R  R   T  VE  N    ILPK  E I 
Conservation:  2111122111102111011100000111111112202321102121211111211011010120111111100000000000000000000000000
STMI:          MMMMMMMMMMM                                                                                      
SS_PSIPRED:    HHHHHHHHHHHHHHHHH                                  EEEE        EEE                               
SS_SPIDER3:    HHHHHHHHHHHHH  H  H                         E   EEEEEEE       EEEE                               
SS_PSSPRED:    HHHHHHHHHHHHHH                      EE             EEE                                           
DO_DISOPRED3:                                                                        DDDDDDDDDDDDDDDDDDDDDDD D  
DO_SPOTD:                        DDD                                                      DDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A: