Q9Y5F6  PCDGM_HUMAN

Gene name: PCDHGC5   Description: Protocadherin gamma-C5

Length: 944    GTS: 1.126e-06   GTS percentile: 0.279     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 2      gnomAD_SAV: 465      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MGPKTLPQLAGKWQVLCMLSLCCWGWVSGQLRYSVVEESEPGTLVGNVAQDLGLKMTDLLSRRLQLGSEENGRYFSLSLMSGALAVNQKIDRESLCGAST 100
gnomAD_SAV:    L# E   H T  R    I  SF *S  F   CF MM G  #EM   II            RW#         HCY    V    P S ET *    AG  
Conservation:  0000000000001020101111001010233162418611143255344255231101300433251311111450431139261412258980493121
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                       
SS_PSIPRED:              HHHHHHHHHHHHHHHHHH       HHH        HHHHH    HHHHHH  EEEE       EEE     EEEE     HHHHH    
SS_SPIDER3:              HHHHHHHHHHH HH      EEEE  HE     EE HHHHHH   HHHHHH   EEE      EEEEE    EEEE     HHHHH    
SS_PSSPRED:               HHHHHHHHHHHHHHHHH  E            EEEHHHHHH   HHHHHH  EEEE      EEEEE    EEEE     HHHHH    
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDD                                                                            
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDD                                                                               
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            SCLLPVQVVTEHPLELIRVEVEILDLNDNSPSFATPEREMRISESAASGARFPLDSAQDPDVGTNTVSFYTLSPNSHFSLNVKTLKDGKPFPELVLEQQL 200
gnomAD_SAV:      P  AP    Q     # DA VV  S I  #V#IA QDIHL   TV#RT*S     HNL         H PN  RNLPPT  I T          #   
Conservation:  0823134333328523214151619489628090000104141912124225162091929341734218062141261501211043111446462217
SS_PSIPRED:     EEEEEEEEE    EEEEEEEEEE             EEEEEE                    HH   EEEE     EEEEEEE     EEEEHH     
SS_SPIDER3:        EEEEEEE    EEEEEEEEE             EEEEEEEE      EE    E          EEE      EEEEEEE     EEEEEEE    
SS_PSSPRED:     EEEEEEEEEE   EEEEEEEEEEE            EEEEEEE                         EEE      EEEE         HHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                DD  DDDDDDDD   DD    D DDDDDD      DDD               D         D  DDDD 

                       10        20        30        40        50        60        70        80        90     
AA:            DREAQARHQLVLTAVDGGTPARSGTTLISVIVLDINDNAPTFQSSVLRVGIPENAPIGTLLLRLNATDPDEGTNGQLDYSFGDHTSEAVRNLFGLDPSSG 300
BenignSAV:                                                                               S                         
gnomAD_SAV:    NH          A     I  H     MFI M   SH  A       HL V D# LTC V  CVH   A GD##S  Y    N I  TAW      H#  
Conservation:  8691110316273619481313453315051729299719181211323040732102214314182809251652417161112110100170531039
SS_PSIPRED:     HHH  EEEEEEEEE        EEEEEEEEEE            EEE EEE       EEEEEEEE       EEEEEE      HHHHHHH       
SS_SPIDER3:         EEEEEEEEEEE     EEEEEEEEEEEE            EEEEEE        EEEEEEE        EEEEEEE     HHHHHHHEE     
SS_PSSPRED:    HHHHHHHHHHHHHHH         EEEEEEEEEE            EEEEEE      EEEEEEE           EEE       HHHHHHH       
DO_DISOPRED3:                                          DD D                                                        
DO_SPOTD:                                                                                                          
DO_IUPRED2A:            DDDDDDD                             D               DDDDD D   DDDDDDDDDD                   
CARBOHYD:                                                                      N                                   

                       10        20        30        40        50        60        70        80        90     
AA:            AIHVLGPIDFEESRFYEIHARARDQGQPAMEGHCVIQVDVGDVNDNAPEVLLASLANPVLESTPVGTVVGLFNVRDRDSGRNGEVSLDISPDLPFQIKPS 400
gnomAD_SAV:       E   T  K#PH  D RE  G   *    V  M  MNM AISG #S    S   DS       A I      Q W   * D       LYM       
Conservation:  1413120485811105140516291616131325151516191786193514140210429441134366452318183304524040410012815112
SS_PSIPRED:    EEEEE         EEEEEEEEE        EEEEEEEEEE       EEEEEE             EEEEEEEE        EEEEE       EEEE 
SS_SPIDER3:     EEEE E       EEEEEEEEEE      EEEEEEEEEEEE       EEEEE            EEEEEEEE           EEE       EEEE 
SS_PSSPRED:    EEEE           EEEEEEEEE       EEEEEEEEEEE       EEEEE            EEEEEEE          EEEEE            
DO_DISOPRED3:                                                 DDDDD DD                                             
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                       DDD   D D  D                                                 DDDDD              

                       10        20        30        40        50        60        70        80        90     
AA:            ENHYSLLTSQPLDREATSHYIIELLASDAGSPSLHKHLTIRLNISDVNDNAPRFNQQLYTAYILENRPPGSLLCTVAASDPDTGDNARLTYSIVGNQVQG 500
gnomAD_SAV:    #Y#  V    #S W T  Y T K  S N#      Q   V       K S  CSK           Q RAF H  MD   A   Y  CPN C A KEFR 
Conservation:  1226353411057690020515251518191524110104040529599617090210313241981134124115160919021640526241110101
SS_PSIPRED:       EEE             EEEEEEEE       EEEEEEEEEEE            EEEEEEE       EEEEEEEE        EEEEEEE      
SS_SPIDER3:      EEEEEE          EEEEEEEEEE        EEEEEEEEE            EEEEEE        EEEEEEEE      EEEEEEEEEE  E  
SS_PSSPRED:       EE               EEEEEEE           EEEEEE            HHHEEEE        EEEEEEE         EEEEEEE      
DO_DISOPRED3:                                                  DDDDDDDD                                            
DO_SPOTD:                                                                                                          
DO_IUPRED2A:        DDDDD                                                               DDDDD        DDDDDD        
CARBOHYD:                                                N                                                         

                       10        20        30        40        50        60        70        80        90     
AA:            APASSFVYVNPEDGRIFAQRTFDYELLQMLQIVVGVRDSGSPPLHANTSLHVFVLDENDNAPAVLHPRPDWEHSAPQRLPRSAPPGSLVTKVTAVDADAG 600
BenignSAV:                                                                          G                              
gnomAD_SAV:    DQ   S      V QV V*HI YC  ML# P  L  #N RP   LD  P N           G    W GRKLA   #  H   AD     MI M  ET 
Conservation:  1122443454213715332235656213151405151828231313432415261918661805337101011111214303401323337536381656
SS_PSIPRED:    EE EEEEEE     EEEE     HHHEEEEEEEEEEEE        EEEEEEEEE       EE                       EEEEEEEEE    
SS_SPIDER3:    E  EEEEEEE     EEEEE      H E EEEEEEEE        EEEEEEEEE       EEEE          EE         EEEEEEEEE    
SS_PSSPRED:        EEEEE      EEEE    HHHHHHEEEEEEEEE        EEEEEEEEEE                               EEEEEEEEE    
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:       D                                                          DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD       
CARBOHYD:                                                    N                                                     

                       10        20        30        40        50        60        70        80        90     
AA:            HNAWLSYSLLPQSTAPGLFLVSTHTGEVRTARALLEDDSDTQQVVVLVRDNGDPSLSSTATVLLVLEDEDPEEMPKSSDFLIHPPERSDLTLYLIVALAT 700
gnomAD_SAV:      V       #RCR     ## A   D C S  #        LA     E   S  F   KG     EKY KKT T  H   YT GC Y IV  TA    
Conservation:  3966726241022121113142123855231203040401121423243436151264432414132311011112101000110101233359544642
STMI:                                                                                                       MMMMMMM
SS_PSIPRED:       HH EEE          EE          HHH       EEEEEEEEE      EEEEEEEEEEE                       HHHHHHHHHH
SS_SPIDER3:     EEEEEEEE         EEEE     EEEE E        EEEEEEEEE  E    EEEEEEEEEE                       HHHHHHHHHH
SS_PSSPRED:      HHHHHH           EEE    HHHHHHHHH       EEEEEEEE         EEEEEEEEE                     HHHHHHHHHHH
DO_DISOPRED3:                                                      DDDDD               DDDDDDDDDDDD                
DO_SPOTD:                                                                              D DDDDDDD DDDDD             
DO_IUPRED2A:                                 DDDDD        DDDDDDDD       DDDDDDDDDDD    DDDDDDDDD                  

                       10        20        30        40        50        60        70        80        90     
AA:            VSLLSLVTFTFLSAKCLQGNADGDGGGGQCCRRQDSPSPDFYKQSSPNLQVSSDGTLKYMEVTLRPTDSQSHCYRTCFSPASDGSDFTFLRPLSVQQPTA 800
gnomAD_SAV:    LR    LNII       REKSE YWSRW   #HR   F   C        G  E R   VA #RPH E LN FS     # WNDGVV   #   IR    
Conservation:  5324432332233343220100000010020000010000000101112122123333443621131021122412322202100221311000000010
STMI:          MMMMMMMMMMMMMM                                                                                      
SS_PSIPRED:    HHHHHHHHHHHHHHHHHH                      HH      EE      HH EEE         EEEEEEE        EEEE          
SS_SPIDER3:    HHHHHHHHHHHHHHHHHH                                E     EHHEEEE        EEEEEE         EEEE         H
SS_PSSPRED:    HHHHHHHHHHHHHHHHHH                                         EEE            EE          EEE           
DO_DISOPRED3:                               DDDDDDDDDDDDDDDD                                              D DDDDDDD
DO_SPOTD:                         D                                                                           DDDDD
DO_IUPRED2A:                           DDDDDDDDDDDDDDDDDDDDDDDD    D  DD  DDD             D            DD         D

                       10        20        30        40        50        60        70        80        90     
AA:            LALEPDAIRSRSNTLRERSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHV 900
gnomAD_SAV:      R     # GF     Q *K L  M  H   T  SRIRC R  N IS  S# P      H    V T  V   GP   AA D V   TH R  S RHYM
Conservation:  1100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
SS_PSIPRED:                                   HHH                      HHHHHHHEEEE  HHH                            
SS_SPIDER3:    H                              H                        HHHHH HEE    H                              
SS_PSSPRED:                                                            HHHHHHHHHHHHHH                              
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                            DDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DDDDDDDDDDDDDD DDDDDDD                          
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DDDDD DDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDD D

                       10        20        30        40    
AA:            PDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 944
gnomAD_SAV:    LH C     LD S     TV  Q D   E   S    L     *
Conservation:  00000000000000000000000000000000000000000000
SS_PSIPRED:          EE                                    
SS_SPIDER3:          EE      EE                            
SS_PSSPRED:          EE                                    
DO_DISOPRED3:  DDD    DD    DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                       DDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD