Q9Y5F7  PCDGL_HUMAN

Gene name: PCDHGC4   Description: Protocadherin gamma-C4

Length: 938    GTS: 6.75e-07   GTS percentile: 0.094     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


            gnomAD_SAV: 427      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MLRKVRSWTEIWRWATLLFLFYHLGYVCGQIRYPVPEESQEGTFVGNVAQDFLLDTDSLSARRLQVAGEVNQRHFRVDLDSGALLIKNPIDREALCGLSA 100
gnomAD_SAV:      HQ # G      V    PI Q A  Y E H       K      #  E   QNM N L H      G     L    H R      #V # T  V  V
Conservation:  0000000000100000120210000110212152325621143354363255331201410333320111000340420125151413358571482011
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                       
SS_PSIPRED:            HHHHHHHHHHHHHHHHHHHHH      HHH    EE  HHHHH    HHHHHH  EEEE       EEEE    EEEE     HHHHH    
SS_SPIDER3:             HHHHHHHHHHHH  HH  H   EEE  HH     EE  HHHH    HHHHHH   EEEE     EEEEE    EEEE     HHHHH    
SS_PSSPRED:             HHHHHHHHHHHHHHHH                     HHHHH    HHH     EEEE      EEEE      EEE     HHHHH    
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDB                                                                            
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDD                                                                               
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            SCIVPLEFVTEGPLEMYRAEVEIVDVNDHAPRFPRQQLDLEIGEAAPPGQRFPLEKAQDADVGSNSISSYRLSSNEHFALDVKKRSDGSLVPELLLEKPL 200
gnomAD_SAV:      VL       S  Q  GEQ D       VL#   P VG  T#        L  K S  T     A R FW R S L   HA  L      S Q  K S 
Conservation:  1824134343433423414050619598729070010104340912025233151040929350745218072040191602111023011356261217
SS_PSIPRED:     EEEEEEEEEE   EEEEEEEEEE          HH EEEEEE                         EEE      EEEEEEE     EEEEEEE    
SS_SPIDER3:      EEEEEEEEE   EEEEEEEEEEE            EEEEE EE       E    E          EEE      EEEEEEE     EEEEEEE    
SS_PSSPRED:    EEEEEEEEEEE   EEEEEEEEEEEE           EEEEEE                                    EE          HHHHH    
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                     D DDDDD  DDD  DDDDDDDDDDD      DD                           DDD   

                       10        20        30        40        50        60        70        80        90     
AA:            DREKQSDYRLVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQLNASDPDLGPSGNVTFYFSGHTPDRVRNLFSLHPTTG 300
gnomAD_SAV:     Q R  YDC A     R   R CA TQ # F # I     G#R YT      A   V    MP S     P STSKI#   #    #H   V # Y    
Conservation:  7781200305362619381713642315060629379618281311813140933203414305172909261542416030101110101160531037
SS_PSIPRED:          EEEEEEEEE        EEEEEEEEEE            EEEEEEE       EEEEEEEE       EEEEEEE     HHHHHHEEE     
SS_SPIDER3:         EEEEEEEEEEE     EEEEEEEEEEEEE           EEEEEE        EEEEEEE        EEEEEEE     HHHHHHEEE     
SS_PSSPRED:     HHHHHHHHHHHHEE         EEEEEEEEEE           EEEEEEEE     EEEEEEE          EEEEEEE    HHHHH         
DO_DISOPRED3:                                          DD D                                                        
DO_SPOTD:                                                                                                          
DO_IUPRED2A:             DDDDDDD D DDDDDDDDDDD                                  D         DDD             DD       
CARBOHYD:                                                                      N          N                        

                       10        20        30        40        50        60        70        80        90     
AA:            KLTLLGPLDFESENYYEFDVRARDGGSPAMEQHCSLRVDLLDVNDNAPYITVTSELGTLPESAEPGTVVALISVQDPDSGSNGDVSLRIPDHLPFALKSA 400
gnomAD_SAV:       F #  N  CD N     Q H # Y  RDPY   QMV M I  #   M  A  VE      A#D  L V#RM  S  EP R  RPCM  R       P
Conservation:  1512020455700105130425292320021314251516292985181413141120527330143253542308172306413050401013525013
SS_PSIPRED:    EEEE          EEEEEEEEE        EEEEEEEEEE       EEEEEE             EEEEEEEE        EEEEE      EEEEE 
SS_SPIDER3:    EEEE EE       EEEEEEEEEE      E EEEEEEEEEE       EEEEE             EEEEEEE           EEE       EEEE 
SS_PSSPRED:    EEEE          EEEEEEEEEE       EEEEEEEEEEEE      EEEEE            EEEEEEE           EEEE        HHHH
DO_DISOPRED3:                                                 DDDDD DDD                                            
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                       DDD   D D                        DDDDD        DDDDDDDDD     DDDDDD              

                       10        20        30        40        50        60        70        80        90     
AA:            FRNQFSLVTAGPLDREAKSSYDIMVTASDAGNPPLSTHRTIFLNISDVNDNPPSFFQRSHEVFVPENNRPGDLLCSLAASDPDSGLNALISYSLLEPRNR 500
gnomAD_SAV:       K             N  H  T  V E  S  F     V#F M            KL VA IL   C  EV  C     S   W #F F   RD   G
Conservation:  1132535341107857102032424241714152332010404061738773917021130215064412512312406061612044131413001210
SS_PSIPRED:        EEE             EEEEEEEEE      EEEEEEEEEEE            EEEEE         EEEEEEEE        EEEEEEE     
SS_SPIDER3:       EEEEEE          EEEEEEEEEE      E EEEEEEEEE            EEEEEE        EEEEEEEE      EEEEEEEEE     
SS_PSSPRED:    HHHHHEE               EEEEEE          EEEEEEEE            EEEEE         HHH             EEEEEE      
DO_DISOPRED3:                                                   DDDD D                                             
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                          DDD DDD           DD            DDDDDDD           DDDD                       
CARBOHYD:                                                 N                                                        

                       10        20        30        40        50        60        70        80        90     
AA:            DVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGSLCPQALPPSVGAGHLITKVTAVDLDS 600
gnomAD_SAV:     I        D    PL  AQ L C E          G Q  AR  G  SI#    G S       HSW Q D    EE SL  C       #I    E 
Conservation:  0001231233110241424313542631213130415252614241323221415162575271543510002310131342231142453463716154
SS_PSIPRED:     EE EEEEEE      EEEEE    HH  EEEEEEEEE         EEEEEEEEE       EE                       EEEEEEEEE   
SS_SPIDER3:      E EEEEEEE    EEEEEE   H   EEEEEEEEEEE        EEEEEEEEE       EEE                     EEEEEEEEEE   
SS_PSSPRED:        EEEEEE     EEEE     HHHHHHHEEEEEEE         EEEEEEEEE                               EEEEEEEEEE   
DO_DISOPRED3:                                        DDDDDDDD                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:       DD            DDDD          DDDDDDDD D                        DDD  DD  DDD                      

                       10        20        30        40        50        60        70        80        90     
AA:            GYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPIPADLPPQKLVIVVKDSGSPPLSTSVTLLVSLEEDTHPVVPDLRESSAPREGESRLTLYLAVSLVAI 700
gnomAD_SAV:      S S F E  K   A   T  #    LQMTL      L    IV  R   I S     I  M  K  I  I LH *      KEA H A   V   L  
Conservation:  6243344313222232225042124544221113226113424231524241420044223030223322301000010001111020322262231300
STMI:                                                                                                      MMMMMMMM
SS_PSIPRED:     HHHHHEEEE         EE       EEEE        EEEEEEEEE      EEEEEEEEEEE                     HHHHHHHHHHHHH
SS_SPIDER3:      EEEEEEEE E      EEE      EEEEEE       EEEEEEEEE  E   EEEEEEEEEEE                      HHHHHHHHHHHH
SS_PSSPRED:       HHHHEEEE        EEE     EEE           EEEEEEEE       EEEEEEEEEEE        HHH          HHHHHHHHHHHH
DO_DISOPRED3:                                                                          DDDDDDDDDDDD                
DO_SPOTD:                                                                                  DDDDDDDDDD              
DO_IUPRED2A:                                                                           DDDDDDDDD                   

                       10        20        30        40        50        60        70        80        90     
AA:            CFVSFGSFVALLSKCLRGAACGVTCFPAGTCACLTRSRRREGLPPSNGILRIQLGSDDPIKFVDVGGHSHGCTPLASAPTRSDSFMMVKSPSAPMAGEPV 800
gnomAD_SAV:    F       MV   N  H   YR I      Y Y # #Q T   #   E I*   RTNE NR  Y   #P#   H     IQ N  V  N L T V R#S 
Conservation:  0420212222220210101010001000000000000011100002110112012000000010022322210112101000000110000000000010
STMI:          MMMMMMMMMMMMM                                                                                       
SS_PSIPRED:    HHHHHHHHHHHHHHHHHH             EEE               EEEE       EEEEE     EEE                           
SS_SPIDER3:    HHHHHHHHHHHHHHHHH             EEEE               EEEE      EEEEEE    EEEE            H              
SS_PSSPRED:    HHHHHHHHHHHHHHHHHH            EEE                EEE         EEE                                    
DO_DISOPRED3:                           DDDDDDDDDDD DDDDDD D                               DDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                                     DDDDDDD   DDDDDDDDDDD
DO_IUPRED2A:                                               DDDDDD                      DD        DD DDDDDDDD  DDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            RPSCPPSDLLYGLEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQN 900
gnomAD_SAV:    H    T  F C P K L  M  H   T  SRIRR R  N IS  S# P      H    V T  V   GP   AA D V   TH R  S RHYMLH C  
Conservation:  0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
SS_PSIPRED:                                                      HHHHHHHHH    HHHH                                 
SS_SPIDER3:                             H                        HHHHHHHHH    HH                                   
SS_PSSPRED:                                                      HHHHHHHHHH                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDD DDDDD DDDDDDDDDDDDDDDDD                                          D  DDDDDDDDDDDDD   
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD     DDDDDDDDDD  DDDDDDDDD                               
DO_IUPRED2A:   DD D  DDDDDDD DD   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDD

                       10        20        30        
AA:            VYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 938
gnomAD_SAV:       LD S     TV  W A   E   S    L     *
Conservation:  00000000000000000000000000000000000000
SS_PSIPRED:    EE                                    
SS_SPIDER3:    EE      EE                            
SS_PSSPRED:           HHH                            
DO_DISOPRED3:  DDDD   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                  DDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD