Q9Y5F9  PCDGI_HUMAN

Gene name: PCDHGB6   Description: Protocadherin gamma-B6

Length: 930    GTS: 1.484e-06   GTS percentile: 0.441     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 3      gnomAD_SAV: 504      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MGGSCAQRRRAGPRQVLFPLLLPLFYPTLSEPIRYSIPEELAKGSVVGNLAKDLGLSVLDVSARKLRVSAEKLHFSVDAESGDLLVKNRIDREQICKERR 100
gnomAD_SAV:    I  RGV  ## ALQ G       F C NPCG    LML    NV A      G     P  LVLE  LR      RA SQRRHF # D   H   R DK 
Conservation:  0000000000000001011132211000112121623266211432542532553412114103333312211440420135151423459581492011
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                      
SS_PSIPRED:                HHHHHHHHHHHHHHHHH        HHH       HHHHHH    HHHHHH   EEEE    EEE      EEE     HHHHH    
SS_SPIDER3:                HHHHHHHHHHHHHHHH    EEEE  HH     EH  HHHH    HHHHHH   EEEE  EEEEEE     EEE  E  HHHH     
SS_PSSPRED:                  HHHHHHHHHHH                    EEEHHHHHH   HHH     EEEEE   EEEEE     EEE     HHHHH    
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDBBDDDDDDDDD                                                                       
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDD                                                                               
DO_IUPRED2A:     DDD                                                                                               

                       10        20        30        40        50        60        70        80        90     
AA:            RCELQLEAVVENPLNIFHVIVVIEDVNDHAPQFDKKEIHLEIFESASAGTRLSLDPATDPDININSIKDYKINSNPYFSLMVRVNSDGGKYPELSLEKLL 200
gnomAD_SAV:    #YG     L   L #   DVLMTK I  NT RS ER LPF M  F  V # V     MGA T TS T GFRT   L L  #I I  GD   # *  Q I 
Conservation:  0714134343433423414150719598629070010204350922025234151050929340745218072140191612211123011356261217
SS_PSIPRED:     EEEEEEEEEE   EEEEEEEEEE             EEEEEE                         EEE      EEEEEEE      EEEEHH    
SS_SPIDER3:      EEEEEEEEE    EEEEEEEEEE       E   EEEEEE EE     EEE               EEE E    EEEEEEE     EEEEEEE    
SS_PSSPRED:    HHHHHHHEEEE   EEEEEEEEEEEE           EEEEEEE                                  EEEEEE       HHHHH    
DO_DISOPRED3:                               D                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                        DDD        DD                            DDDDD 

                       10        20        30        40        50        60        70        80        90     
AA:            DREEQRSHSLILTALDGGDPPRSATAHIEISVKDTNDNPPVFSRDEYRISLSENLPPGSPVLQVTATDQDEGVNAEINYYFRSTAQSTKHMFSLDEKTGM 300
gnomAD_SAV:     Q  * P     S  #  Y  I#S  RV  FI# ISGDT#IS  N  K     D SARY   L        AIDSDV CC  T SHN   T    DT  V
Conservation:  7781200305362619381713642315061629379628281311814241943203414315172909261542516030111101111605310371
SS_PSIPRED:       HH EEEEEEEEE        EEEEEEEEEE            EEEEEE        EEEEEEEE       EEEEEEEE   HHHHH EEE     E
SS_SPIDER3:       H  EEEEEEEEEE     E EEEEEEEEEE            E EEEEE       EEEEEE       E EEEEEEEE    HHHHHEEE      
SS_PSSPRED:    HHHHHHHHHHHHHHHH        EEEEEEEEEE         HHHEEEEEE       EEEEEEE        EEEEEEEE   HHHHHHH        
DO_DISOPRED3:                                       D     D                                                        
DO_SPOTD:                                                                                                          
DO_IUPRED2A:            DDDDDDDD     DDDDDDDDDDDDDDDDD DDDDDDDDDD  D    DDDDDDDDDDDD                       DDDD    

                       10        20        30        40        50        60        70        80        90     
AA:            IKNNQSFDFEDVERYTMEVEAKDGGGLSTQCKVIIEILDENDNSPEIIITSLSDQILENSPPGMVVALFKTRDLDFGGNGEVRCNIETDIPFKIYSSSNN 400
gnomAD_SAV:    VN  E C S# GKG  V L V N* V CI #   # T    N   AT N    H V G             WYM  RR E    DVK    LE S   S 
Conservation:  5120204557101051305253924221314251516292986181413141120527330143253542308172306413050401013525113112
SS_PSIPRED:    EEE         EEEEEEEEEE     EEEEEEEEEEE       EEEEEE             EEEEEEEE        EEEEEE     EEEEE    
SS_SPIDER3:    EEE EE  H    EEEEEEEEEE    EEEEEEEEEEE        EEEEE             EEEEEEE E        EEEEE     EEEEE    
SS_PSSPRED:    EEE          EEEEEEEEEE      EEEEEEEEEE       EEEEE             EEEEEEEE        EEEEE       EEEE    
DO_DISOPRED3:                                           DD DDDDD  D                                                
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                      D                            D DDD                                               
CARBOHYD:         N                                                                                                

                       10        20        30        40        50        60        70        80        90     
AA:            YYKLVTDGALDREQTPEYNVTIVATDRGKPPLSSSRSITLYVADINDNAPVFDQTSYVVHVAENNPPGASIAQVSASDPDLGLNGHISYSIVASDLEPLA 500
gnomAD_SAV:      R G #  P * P Q  KDAVI I  D #L   G     C  EVDH SS  H*R *LAYM #  L    #   RVCG NV  S        V      P
Conservation:  2535341206756102041525241616163422110304051637663717121131215165413511312407062712044121413011031211
SS_PSIPRED:     EEEEE             EEEEEE        EEEEEEEEEE            EEEEEEE       EEEEEEEE        EEEEEEE        
SS_SPIDER3:    EEEEEE             EEEEEEE  E    EEEEEEEEEE        E    EEEEE        EEEEEEEE       EEEEEEEE        
SS_PSSPRED:     EEEE              EEEEEE          EEEEEEEEEE           EEEEEE        EEEEEE         EEEEEE         
DO_DISOPRED3:                                                 DD                                                   
DO_SPOTD:                                                                                                          
DO_IUPRED2A:         D        DD  DDDDDDD                                          DDDDDDDD                        
CARBOHYD:                        N                                                                                 

                       10        20        30        40        50        60        70        80        90     
AA:            VSSYVSVSAQSGVVFAQRAFDHEQLRAFALTLQARDHGSPTLSANVSLRVLVGDRNDNAPRVLYPALGPDGSAFFDMVPRSAEPGYLVTKVVAVDADSGH 600
gnomAD_SAV:      A    RT TR MVVECSS  #   T VF   VSV     #  K  VPL AEEHK    #  *LV CSEVP#L  I LP#   S V  R A  GT *EQ
Conservation:  1231233210241323213533521223130414152715252323231416172575271543511200121113235224114335356372615452
SS_PSIPRED:     EEEEEEE     EEEEE   HHHEEEEEEEEEEE         EEEEEEEEE       EEE                        EEEEEEEE    H
SS_SPIDER3:      EEEEEE     EEEEE   H   EEEEEEEEEEE      E EEEEEEEEEE      EEE           EEE          EEEEEEEE     
SS_PSSPRED:     EEEEEEE    HHHHHHH HHHHHHHHHHHHEEE         EEEEEEEEE                                 EEEEEEEEE     
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                DD                                     
CARBOHYD:                                                  N                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            NAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADNLQEILPDLSDRPVLSDPQAELQFYLVVALALIS 700
BenignSAV:                                                                                        S                
gnomAD_SAV:     S Q HPM   IKR#      L   MHM G *   VVGC PQ F A YS P L   ATMVQ  VT TF       RNH    NS*      P  V  S #
Conservation:  4335441322224223503211453522111312251133242315253414243312131433233222223300010000101213223523342223
STMI:                                                                                                     MMMMMMMMM
SS_PSIPRED:    HHHHHHEE         EE          HHH        EEEEEEEE      EEEEEEEEEEE  HHHH               HHHHHHHHHHHHHH
SS_SPIDER3:     H HHHHHHH      EEE      EEE EE         EEEEEEEE  E   EEEEEEEEEEE  HHHH                HHHHHHHHHHHHH
SS_PSSPRED:    HHHHHHHHHE        E     HHHHHHHH  HHHHHHHEEEEEEE        EEEEEEHHHHHHHHH              HHHHHHHHHHHHHHH
DO_DISOPRED3:                                                        D                DDD DDDDDD                   
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            VLFLLAVILAIALRLRRSLSPATWDCFHPGLCVKSGPVVPPNYSEGTLPYSYNLCIAHTGTKEFNFLKCSVPLHSNEDMVCSVSPGALIPPHGGEDLTSH 800
BenignSAV:                          T                                                    A                         
gnomAD_SAV:    A  FV M   V SC  P  RST# N        RP  I  HS  QR  S F      RM         FN    AS  VLY    ET  T N R   I  
Conservation:  2342222212220211010110100010001110211021101012112212211111111000011100000010110000000000000000000000
STMI:          MMMMMMMMMMMM                                                                                        
SS_PSIPRED:    HHHHHHHHHHHHHHHHH   HHHHHH                        EEEEEEE       EEEEE                               
SS_SPIDER3:    HHHHHHHHHHHHHHHHH   HHHHH      E E                 EEEEEE      E EEEE        H                      
SS_PSSPRED:    HHHHHHHHHHHHHHHHH    HHHH                          EEEEEE        E                                  
DO_DISOPRED3:                                                                      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                                       DDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                                              DDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            PETLTSQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNA 900
gnomAD_SAV:         LK L  M  H   T  SSIRC R  N IS  S# P      H    V T  V   GP   RA D V   TC R  S RHYMLH H     LD S 
Conservation:  0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
SS_PSIPRED:                                              HHHHH  EEEEHHHHH                                  EE      
SS_SPIDER3:                                    E         HHHHHE EEEE  HH                                   EE      
SS_PSSPRED:                                             HHHHHHHHHHHHHHHH                                   EE      
DO_DISOPRED3:  DDDDDDDDD DDDDDDDDDDDDDDDDDDDD                                    D    D DD   DD                   D
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD           D                                                      D
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD    DDDD DD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDDDDDD

                       10        20        30
AA:            TLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 930
gnomAD_SAV:        TV  L D   E   S    L     *
Conservation:  000000000000000000000000000000
SS_PSIPRED:                                  
SS_SPIDER3:                                  
SS_PSSPRED:                                  
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      D DDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD