Q9Y5G0  PCDGH_HUMAN

Gene name: PCDHGB5   Description: Protocadherin gamma-B5

Length: 923    GTS: 1.655e-06   GTS percentile: 0.517     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 1      gnomAD_SAV: 502      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MGSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSEKPYFTVSAESGELLVSSRLDREEICGKKP 100
gnomAD_SAV:      N SED      M     LQ  V   VP  HM   T K T M FA                 L      K L   L#SD  Q  E GG G  KTG  T 
Conservation:  0000000000000001110021012101112221623256211442543632553312114103333312111440420135151413448581492011
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                      
SS_PSIPRED:              HHHHHHHHHHHHHHHHHHHHH                HHHHHH    HHHHH    EEE     EEE      EEE     HHHHH    
SS_SPIDER3:                HHHHHHHHHHHH HHH H  EEEE  H      EE  HHHH    HHHHHH   EEEE   EEEEE     EEE     HHHHH    
SS_PSSPRED:               HHHHHHHHHHHHHHHHHHHHH             EEEHHHHHH   HHH     EEEEE    EEEE    EEEE     HHHHH    
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDBBDD                                                             
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDD                                                                              
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            ACALEFEAVAENPLNFYHVNVEIEDINDHTPKFTQNSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSLNPSFSLIIKEKQDGSKYPELALEKTL 200
BenignSAV:                                                                                            S            
gnomAD_SAV:             D      H ES    N    RR* PR  S Q    PT RD  LL   T H  T      T   P SSR    VT  R SGE SK  #    
Conservation:  0724134343433423414150619598729070110204350922025334151050929350745218072140191612211123011356252218
SS_PSIPRED:     EEEEEEEEEE   EEEEEEEEEE            EEEEEEE       EEE           HH  EEE      EEEEEEE       EEHH     
SS_SPIDER3:      EEEEEEEEE    EEEEEEEEEE      EE   EEEEEEEEE     EEE   E           EEE      EEEEEEE     EEEEEEE    
SS_PSSPRED:      EEEEEEEEE    EEEEEEEEEEE           EEEEEE       EE                  E       EEEEE        HHHHHH   
DO_DISOPRED3:                             DDDDDD DD                       DDDDDD DDD                               
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                       DDDDD                                                   DDDDDD  

                       10        20        30        40        50        60        70        80        90     
AA:            DREQQSYHRLVLTALDGGHPPLSGTTELRIQVTDANDNPPVFNRDVYRVSLRENVPPGTTVLQVSATDQDEGINSEITYSFYRTGQIFSLNSKSGEITTQ 300
gnomAD_SAV:     Q#  T RH    V  D # R RS P I#   N GK      S*EMC      K# S# A       E G*D IL SNN LC AR  INV *   K   P
Conservation:  7781200305362619381713642315061629379728381312824241943203414315172909261542416130010116054103815220
SS_PSIPRED:          EEEEEEEEE        EEEEEEEEEE            EEEEEE        EEEEEEEE       EEEEEEEEEHHH EEE     EEEE 
SS_SPIDER3:          EEEEEEEEEE      EEEEEEEEEEEE       E   EEEEEEE       EEEEEE       E EEEEEEEEE  E EEE     EEEE 
SS_PSSPRED:     HHHHHHHHHHHHHHH        EEEEEEEEEE           EEEEEEE       EEEEEEE         EEEEEEE   EEEEE     EEEE 
DO_DISOPRED3:                                           DDD                                                        
DO_SPOTD:                                                                                                          
DO_IUPRED2A:             D           DDDDDDDDD DDDD      DD DDDD        DDDDDDDDDDD                              DD

                       10        20        30        40        50        60        70        80        90     
AA:            KKLDFEETKEYSMVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILENAVPGTLIALIKIHDQDSGENGEVNCQLQGEVPFKIISSSKNSYKL 400
gnomAD_SAV:       NYDD  #C II DR   SRR  * A          S#  FI   P       EL       T  R                KF LNM  P NTLF  
Conservation:  2045571010613052529242213142515162929851814131411215274301432535423081723063130504011135251131122435
SS_PSIPRED:             EEEEEEEEE     EEE EEEEEEE       EEEEEE             EEEEEEEE        EEEEE      EEEEE     EEE
SS_SPIDER3:    E   H   EEEEEEEEEEE    EEEEEEEEEEE        EEEEE  E         EEEEEEEEE         EEEEE     EEEEE    EEEE
SS_PSSPRED:             EEEEEEEEEE     EEEEEEEEEEE       EEEEE   HHH     HHHEEEEEE          EEEE       EEEE     EEE
DO_DISOPRED3:                                       DD DDDDD  D                                                    
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   DDD     D  D   D              DD DDDDD D                                  DDDDD                     

                       10        20        30        40        50        60        70        80        90     
AA:            VTDGTLDREQTPEYNVTITATDRGKPPLSSSISVILHIRDVNDNAPVFHQASYLVSVPENNPPGASIAQVCASDLDLGLNGQVSYSIMASDLEPLALASY 500
gnomAD_SAV:          EQ KIS  H      EK     F IVR T YF      #L SY*SFC IR    H #   TSE YVW    EV SH  CYVTT      PVP  
Conservation:  3412067471120425252416161624221103040516376537160211312151754135123124050626120541224130121212111232
SS_PSIPRED:    EE             EEEEEE        EEEEEEEEEE            EEEEEEE       EEEEEEEE        EEEEEEE         EEE
SS_SPIDER3:    EE             EEEEEEE  E   E EEEEEEEEE            EEEEEE        EEEEEEE         EEEEEEE         EEE
SS_PSSPRED:    E              EEEEEE         EEEEEEEEEEE          EEEEEEE        EEEEE          EEEEEE        HHHEE
DO_DISOPRED3:                                            DDD                                                       
DO_SPOTD:                                                                                                          
DO_IUPRED2A:    DDDD     DDDDDDDDDDD                                            D                                  
CARBOHYD:                    N                                                                                     

                       10        20        30        40        50        60        70        80        90     
AA:            VSMSAQSGVVFAQRAFDYEQLRTFELTLQARDQGSPALSANVSLRVLVGDRNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWL 600
gnomAD_SAV:    MTV#VH R  ## CV  #K PLAL*   P #   LRTFRG     M    * GH  WM DSV C   C F GILA#T    C      T#ETEL R V M
Conservation:  2432212514232134335212121314141427142413232314261625752715436112001211131341241143353352616153523334
SS_PSIPRED:    EEEE     EEEEE   HHHEEEEEEEEEEE         EEEEEEEEE       EEE                       EEEEEEEEE    HHHHH
SS_SPIDER3:    EEEE     EEEEE  EH   EEEEEEEEEEE      EEEEEEEEEEEE      EEE           EEE         EEEEEEEEE      HHH
SS_PSSPRED:    EEEE    HHHHHHH  HHHHHHHHHHEEEE         EEEEEEEEE                                 EEEEEEEEE     HHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                            DD                                         
CARBOHYD:                                              N                                                           

                       10        20        30        40        50        60        70        80        90     
AA:            SYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLPDITDRPVPSDPQAELQFYLVVALALISVLFL 700
gnomAD_SAV:    F  L K #GLE  I  MS # LCITL#  N    C*G  LTMP  ARL   TAT VPVLY       PSYVAGCR R ESH G #   M #  FM     
Conservation:  3423221242236031124534121113122511232423142424152323231313332332231233200010110032132235243422232342
STMI:                                                                                                 MMMMMMMMMMMMM
SS_PSIPRED:    HHEE         EE          HHH        EEEEEEEE      EEEEEEEEEEE  HHH                 HHHHHHHHHHHHHHHHH
SS_SPIDER3:    HHHHHH      EEE      EEE E          EEEEEEEE  E   EEEEEEEEEEE  HHHH                HHHHHHHHHHHHHHHHH
SS_PSSPRED:    HHHHHE        E     HHHHHHHH  HHHHHHHEEEEEEE        EEEHHHHHHH HHHH               HHHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                      DD  D DDD                       
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                         DDD D                         

                       10        20        30        40        50        60        70        80        90     
AA:            LAVILAVALRLRRSSSPAAWSCFQPGLCVKSGPVVPPNYSQGTLPYSYNLCVAHTGKTEFNFLKCSEQLSSGQDILCGDSSGALFPLCNSSESTSHPELQ 800
gnomAD_SAV:    VSMM #I  L  G#   P#  *  TD   RY* E  HS R#R  # Y  PS # I  K*     Y      *RGVPRRYAF    #P   #KL #    K
Conservation:  2232122202210101100000000000011121221120112213222111101010000111100100101110000000000000000000000000
STMI:          MMMMMMMM                                                                                            
SS_PSIPRED:    HHHHHHHHHHHH     HHHH                        EEEEEEEE     EEEE                                      
SS_SPIDER3:    HHHHHHHHHHH H   HHHH       EEE                 EEEEEE     EEEEEE          HH                        
SS_PSSPRED:    HHHHHHHHHHHHH   HHHHHH                        EEEEEE      EEEE                                      
DO_DISOPRED3:    DDD  D              D                                                 DDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                             DDD   DDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                                                 DDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            APPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG 900
gnomAD_SAV:     L  M  H   T  SSIRS R  N IS  S# P      H    V T  V   GP   AA D V   TH R  S RHYMLH C     LD S     TV 
Conservation:  0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
SS_PSIPRED:                                       HHHHHHHHHEHHHHHHH                                 EE             
SS_SPIDER3:                                       HHHHHHHHHHHHHHH                                 H EE      H      
SS_PSSPRED:                                      HHHHHHHHHHHHHHHH                                   EE             
DO_DISOPRED3:      DDDDDDDDDDDDDDDDDDD                                                D                    DDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DDDDDDDDDDD     DDDDDDD                                       D DDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD     D    DD   DDDDDDDDDDDDDDDD DDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDD

                       10        20   
AA:            KRDGKAPAGGNGNKKKSGKKEKK 923
gnomAD_SAV:     Q D   E   S    L     *
Conservation:  00000000000000000000000
SS_PSIPRED:                           
SS_SPIDER3:                           
SS_PSSPRED:                           
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDD