Q9Y5G1  PCDGF_HUMAN

Gene name: PCDHGB3   Description: Protocadherin gamma-B3

Length: 929    GTS: 1.707e-06   GTS percentile: 0.540     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 3      gnomAD_SAV: 570      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MGNSSGWRGPAGQRRMLFLFLLSLLDQALSEPIRYAIPEELDRGSLVGNLAKDLGFGVGDLPTRNLRVIAEKKFFTVSPENGNLLVSDRIDREEICGKKS 100
BenignSAV:                        Y       V                                                                        
gnomAD_SAV:    IRS  ERK T  *K     YP   FE*   *#   STS*D N  LP AKF    E  M#   A # Q V KN L  #  KK  I #RNL# P G    EW
Conservation:  0000000000000001011111001000002121623266211432542532553312014103333210111440420135151423459580492011
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                      
SS_PSIPRED:               HHHHHHHHHHHHHHHHHH        HHH       HHHHHH    HHH     EEEEE    EEE     EEEE     HHHHH    
SS_SPIDER3:                 HHHHHHHHHHHHHHHH   EEEE  H      EHHHHHHH    HHHHHH   EEEE  EEEEEE     EEE     HHHHH    
SS_PSSPRED:                HHHHHHHHHHHHHHHH                 EH HHHHHH           EEEEEEEEEEEE     EEE      HHHHH    
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDD                                                                          
DO_SPOTD:      DDDDDDDDDDDD                                                                                        
DO_IUPRED2A:   DDDDDD                                                                                              

                       10        20        30        40        50        60        70        80        90     
AA:            TCVLEFEMVAEKPLNFFHVTVLIQDINDNPPTFSQNITELEISELALTGATFALESAQDPDVGVNSLQQYYLSPDPHFSLIQKENLDGSRYPELVLKAPL 200
gnomAD_SAV:       P   ID  *T  SLLI    HYT NI L L   T      K  #SVD  G A TKGS AD I V    VR     FFT   KVG  MFAD  VE L 
Conservation:  0714134343433423414150619598729070010204340912025233151040929350745218072040191602211023011356261217
SS_PSIPRED:     EEEEEEEEEE   EEEEEEEEEE            EEEEEEE       EE           HHH  EEEE     EEEEEEE       EEEEE    
SS_SPIDER3:      EEEEEEEEE    EEEEEEEEEE       E   EEEEEEEEE     EEE               EEE      EEEEEEE     EEEEEEE    
SS_PSSPRED:     EEEEEEEEEE   EEEEEEEEEEEE           EEEEEE       EE                 E         EEEEE          E     
DO_DISOPRED3:                                D D                            D                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                    D                                                D             DDD 
CARBOHYD:                                         N                                                                

                       10        20        30        40        50        60        70        80        90     
AA:            DREEQPHHHLVLTAVDGGEPSRSCTTQIRVIVADANDNPPVFTQDMYRVNVAENLPAGSSVLKVMAIDMDEGINAEIIYAFINIGKEVRQLFKLDSKTGE 300
gnomAD_SAV:          R   # #VM  SKST NRA  ST   T TI KTSLY   LHS S#S    S F L   #      D  VA # V NS D   *# LR  R   K
Conservation:  7781200305362619381713642315060629379618271311813140933203414305172909261542416030111101011605310370
SS_PSIPRED:           EEEEEEEEE       EEEEEEEEEE            EEEEEEE       EEEEEEEE       EEEEEEEE   HHHHHHEEE     E
SS_SPIDER3:          EEEEEEEEEE     EEEEEEEEEEEE        E   EEEEEEE       EEEEEE E     E EEEEEEEE   HHHHHHEEE      
SS_PSSPRED:          HHHHEEEEE         EEEEEEEEEE           EEEEEEE       EEEEEEE        EEEEEEHHH  HHHHHHH       E
DO_DISOPRED3:                                       D DDDDD                                                        
DO_SPOTD:                                                                                                          
DO_IUPRED2A:         DDDDDDDDDDD           DD             D                                                        

                       10        20        30        40        50        60        70        80        90     
AA:            LTTIGELDFEERDSYTIGVEAKDGGHHTAYCKVQIDISDENDNAPEITLASESQHIQEDAELGTAVALIKTHDLDSGFNGEILCQLKGNFPFKIVQDTKN 400
BenignSAV:                                                                                             K           
gnomAD_SAV:    V SVR#R L # ENC TE  SR  RQ   N  IR G     G  #       YR MR V   E   V    R I    D Q  R Q  K T   IR  QT
Conservation:  5120204557001051304252923221314251516292986181413141120527330143253542308172306313050401013525113113
SS_PSIPRED:    EEE         EEEEEEEEEE      EEEEEEEEEE       EEEEEE             EEEEEEEE        EEEEE      EEEEE    
SS_SPIDER3:    EEEE         EEEEEEEEEE     EEEEEEEEEE        EEEEE  EE         EEEEEEEEE      EEEEEEE     EEEEE    
SS_PSSPRED:    EEE           EEEEEEEEE      EEEEEEEEEE       EEEEE           HHHHEEEE          EEEEE       EEEE    
DO_DISOPRED3:                                             DDDDDD  DD                                               
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                    D D                      DDDDDDDDDDDDD                                             

                       10        20        30        40        50        60        70        80        90     
AA:            TYRLVTDGALDREQIPEYNVTITATDKGNPPLSSSKTITLHILDVNDNVPVFHQASYTVHVAENNPPGASIAHVRASDPDLGPNGLVSYYIVASDLEPRE 500
gnomAD_SAV:      G  K  # YP       M## T  NDKSLI T        FN   ##SI  L    LP  DS ## V N  L   GA#S  K F PNH MV    R# 
Conservation:  2535341106747002032425241616162422010304051737653716021130215065412512312406062712044121413011100001
SS_PSIPRED:    EEEEEE             EEEEEE        EEEEEEEEEE            EEEEEEE       EEEEEEEE        EEEEEEE        
SS_SPIDER3:    EEEEEE     H       EEEEEEE       EEEEEEEEEE  E         EEEEEE        EEEEEEE        EEEEEEEEE      E
SS_PSSPRED:    EEEEE              EEEEEE          EEEEEEEEE           EEEEEEE        EEEEEEE        EEEEEEE        
DO_DISOPRED3:                                                DDDD                                                  
DO_SPOTD:                                                                                                          
DO_IUPRED2A:        DD        DD DDDDDDDDD D D                               D    DDDDDDDDD                        
CARBOHYD:                        N                                                                                 

                       10        20        30        40        50        60        70        80        90     
AA:            LSSYVSVSARSGVVFAQRAFDHEQLRAFELTLQARDQGSPTLSANVSLRVLVDDRNDNAPLVLYPALGPEGSALFDMVPRSAEPGYLVTKVVAVDADSGY 600
gnomAD_SAV:    R  SL M TWR MM V *# GQ*LPH   P   S#HRC  M  P#MN SL  HNL HD R   H V   K    # V TH  Q S       T   #LRH
Conservation:  1231233110241433213643521213120415163716241223121416162575271544511211123113135223115334345361615452
SS_PSIPRED:     EEEEEEE     EEEEE   HHHEEEEEEEEEEE         EEEEEEEEE       EEE                        EEEEEEEE    H
SS_SPIDER3:     EEEEEEE     EEEEE       EEEEEEEEEEE      E EEEEEEEEE       EEEE          HH           EEEEEEEE     
SS_PSSPRED:      EEEEEE     HHHHHH HHHHHHHHHHHHEEE         EEEEEEEEE                                 EEEEEEEEE     
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                 D                                                                     
CARBOHYD:                                                  N                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            NAWLSYHIVQASEPGLFSLGLRTGEVRTARTLGDREAARQRLLVTVRDGGQQPLSATVMLHLIFADSLQEIQPDLSDRPTPSDPQAELQFHLVVALALIS 700
gnomAD_SAV:    SPLP H # H #D    T S HM V #M LISRYS  S #    NLHNR RRL P# I      #    DM L F#  S    T G  H  P  VMV  *
Conservation:  4325442312124222503111452412111212251133232315242414232323131323233223222300000000101213223523342123
STMI:                                                                                                     MMMMMMMMM
SS_PSIPRED:    HHHHHHEEE        EE          HHH  HHHH  EEEEEEEE      EEEEEEEEEEE  HHHH                HHHHHHHHHHHHH
SS_SPIDER3:     EEHHHHEHE      EEE      EEEEEE       H EEEEEEEE  E   EEEEEEEEEEE  HHHH               HHHHHHHHHHHHHH
SS_PSSPRED:     HHHHHEEEEE      EE      HHH HHH HHHHHHHEEEEEEEE      HHHHHHHHHHHHHHHHH H             HHHHHHHHHHHHHH
DO_DISOPRED3:                                                                          DD  D DD                    
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                D                                           DDDDDDDDD                  

                       10        20        30        40        50        60        70        80        90     
AA:            VLFLLAVILAISLRLRCSSRPATEGYFQPGVCFKTVPGVLPTYSERTLPYSYNPCAASHSSNTEFKFLNIKAENAAPQDLLCDEASWFESNDNPEMPSNS 800
gnomAD_SAV:    M   #   RT  VSQQW    S   C PL  GL  L   F#S# G   T  CHL    R * NK R   T DA    E I YE G#*Y    #  I P  
Conservation:  1241222222211220101011000000001000001110002130002211211111010000001100000001000000000000000000000000
STMI:          MMMMMMMMMMMM                                                                                        
SS_PSIPRED:    HHHHHHHHHHHHHHHHH                                 EEEEEE                    HHHH                    
SS_SPIDER3:    HHHHHHHHHHHHHHHHH             E EE                 EEEEE        EEE                                 
SS_PSSPRED:    HHHHHHHHHHHHHHHHH              EE                                EE                                 
DO_DISOPRED3:                                                                         DDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                                DDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                                         D   DDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            GNLQKQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNAT 900
gnomAD_SAV:        NK L  M  H   T  SSIRR R  N IS  S# P      H    V T  P   GF   RA D V   TH R  S RHYMLH H     LD S  
Conservation:  0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
SS_PSIPRED:                    HHH                      HHHHHHHHHHHHHHHHH                                 EEE      
SS_SPIDER3:                                             HHHHHHHHHHHHHHH                                   EE      E
SS_PSSPRED:                                             HHHHHHHHHHHHHHHH                                  EE       
DO_DISOPRED3:  DDDDDD        DDD DDDDDDDDD                                                                         
DO_SPOTD:      DDDDDDDDDDDD    DDDDDDDDDDDDDDDDD      DDDDDDDDD   DDDDDDDDDDDDDDDDDDDDDDD                       DDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDDDDDDD

                       10        20        3
AA:            LTNAAGKRDGKAPAGGNGNKKKSGKKEKK 929
gnomAD_SAV:       TV  L D   E   S    L     *
Conservation:  00000000000000000000000000000
SS_PSIPRED:                                 
SS_SPIDER3:    E                            
SS_PSSPRED:                                 
DO_DISOPRED3:   DDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:       DDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDD