Q9Y5G2  PCDGE_HUMAN

Gene name: PCDHGB2   Description: Protocadherin gamma-B2

Length: 931    GTS: 1.884e-06   GTS percentile: 0.612     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 3      gnomAD_SAV: 550      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MKASSGRCGLVRWLQVLLPFLLSLFPGALPVQIRYSIPEELAKNSVVGNLAKDLGLSVRDLPARKLRVSAEKEYFTVNPESGDLLVSDRIDREQICGKQP 100
BenignSAV:                              R                               I                                          
gnomAD_SAV:      TN EGS   L      H P*PSLR##    T  PV#*  #RS  L  F   PE  IQ  LS  VQI V  *  # KT     PGR#G GGG VRR  L
Conservation:  0000000000000002000101111000102331624186111431553442552311013004232413111450431139161412258980493111
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                      
SS_PSIPRED:              HHHHHHHHHHHHHHH            HHH       HHHHHH    HHHHH    EEEE    EEE      EEE     HHHHH    
SS_SPIDER3:               HHHHHHHHHHH H        EEEE  HH     EHHHHHHH    HHHHHH   EEEE    EEEE     EEE     HHHHH    
SS_PSSPRED:               HHHHHHHHHHHHHH       EE   HHH     EEHHHHHHH   HHH     EEEEEE   EEE      EEE     HHHHH    
DO_DISOPRED3:  DDDDDDDDDDDDBBBDDDDDDDDDDDDDD      D                                                                
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDD                                                                              
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            LCVLDFDTVAENPLNIFYIAVIVQDINDNTPLFKQTKINLKIGESTKPGTTFPLDPALDSDVGPNSLQRYHLNDNEYFDLAEKQTPDGRKYPELILKHSL 200
gnomAD_SAV:          V# T      S VT   PETTV N# #E#  N S SDK S   AI     P  LGA L   KS  RH K##      E AG C   KM   Q  
Conservation:  0823134323328423214151619489628090000104141912124224161091929331734208062141261501101032111446462217
SS_PSIPRED:     EEEEEEEEEE   EEEEEEEEEE             EEEEEE                     HH  EEE      EEEEEEE       EEEHH    
SS_SPIDER3:      EEEEEEEEE    EEEEEEEEEE       E H E EEEEEEE     EEE               EEE      EEEEEEE     EE EEEE    
SS_PSSPRED:      EEEEEEEEE   EEEEEEEEEEEE           EEEEEE                                    EEE         HHHHHH   
DO_DISOPRED3:                                                             D D                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                D  D DDDDDDDDD   D DD           DDDDDDD       DDDDD    

                       10        20        30        40        50        60        70        80        90     
AA:            DREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYRVTLREDVPPGFFVLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKTGE 300
gnomAD_SAV:    N   YGF   A  V # R    #DMN LQ  LM T N AAE G N  T     HL L      GR  HQ K     V    Q M KKL    TFSD  E 
Conservation:  8691110316173619481313453215051729299719181111323040732102214304182809251652407161121101001705310391
SS_PSIPRED:          EEEEEEEEE        EEEEEEEEEE            EEEEEE        EEEEEEEE       EEEEEEEE   HHHHHHEEE     E
SS_SPIDER3:          EEEEEEEEEE     EEEEEEEEEEEE        E   EEEEEE        EEEEEE       E EEEEEEEE   HHHHHH EE      
SS_PSSPRED:     HHHHHHHHHHHHHH          EEEEEEEEE           EEEEEEE      EEEEEEEE        EEEEEEE    HHHHHHH        
DO_DISOPRED3:                                       D  DDDDD                                                       
DO_SPOTD:                                                                                                          
DO_IUPRED2A:             DDDDDDDDD DDDDDDDDDDDDDDDD      DD DDD             D             DD                       

                       10        20        30        40        50        60        70        80        90     
AA:            ITTKDDLDFEIASSYTLSIEAKDPGDLAAHCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGTVIALIKTRDRDSGENGEVYCQVLGNAKFILKSSSKN 400
gnomAD_SAV:    VM #G VY  TS      MK NY   VG    L*  T  ESNYV K T P   I  L    A A VTFT K GG  R K K  **  E  #I F Y# # 
Conservation:  4131204858111051405162916131325051516191786193514140210428441134266452318183304424040400012815112211
SS_PSIPRED:    EEE         EEEEEEEEEE      EEEEEEEEEE       EEEEEE             EEEEEEEE        EEEEEE     EEEEE    
SS_SPIDER3:    EEE     HH  EEEEEEEEEEE    EEEEEEEEEEE        EEEEE             EEEEEEEE     H   EEEEE     EEEEE    
SS_PSSPRED:    EEE          EEEEEEEEE       EEEEEEEEEE      EEEEEE            EEEEEEE          EEEEE     EEEEEE    
DO_DISOPRED3:                                           D  DDDDD  DD                                               
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                   DDDDDDD       DDDDDDDDDD       DD                   

                       10        20        30        40        50        60        70        80        90     
AA:            YYKLVTDGALDREEIPEYNLTITATDGGKPPLSSSIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVSYSIVASDLKPRE 500
gnomAD_SAV:    CCR  SNSS GGVK        I P R# SS FFI VF #   EI#N VL S  A *I LLT KT S S VV  G       S D*G * VITRY  Q# 
Conservation:  2625341105769002051525151819152411010404052959961709020031314198113412411506091902064052624111010100
SS_PSIPRED:     EEEEE             EEEEEE        EEEEEEEEEE            EEEEEEE       EEEEEEEE        EEEEEEE        
SS_SPIDER3:    EEEEEE     H       EEEEEE   E     EEEEEEEEE EE          EEEEE        EEEEEEE        EEEEEEEE       E
SS_PSSPRED:     EEEE              EEEEEE         EEEEEEEEEE           EEEEEEE        EEEEEE         EEEEEE         
DO_DISOPRED3:                                                DDD                                                   
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                  DD  DDDDD                               DDD    D     DDDDDDDDD                       
CARBOHYD:                        N                                                                                 

                       10        20        30        40        50        60        70        80        90     
AA:            ILSYVSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGH 600
gnomAD_SAV:    V  HLFL #  # #IGR VLHQ    V      VCH S  V     N H#   #HS K  #   L  AT A     I SC T RS      LV VT   Q
Conservation:  2244345321371533223565621305140515181823131343241526191866180533710101112012143034012233375363806563
SS_PSIPRED:     EEEEEEE     EEEEE   HHHEEEEEEEEEEE         EEEEEEEEE       EEE                       EEEEEEEEE    H
SS_SPIDER3:    EEEEEEEE     EEEEE        EEEEEEEEEE        EEEEEEEEE       EEE           HEE         EEEEEEEEE     
SS_PSSPRED:     EEEEEEE    HHHHHHH HHHHHHHHHHHHEEE         EEEEEEEEE                                 EEEEEEEEE     
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                  N                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            NAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPDLSDRREPSDPQAKLQFYLVVALALIS 700
BenignSAV:                                                                                           E             
gnomAD_SAV:    TP* TC #M SR# RI   AV  A MG V# M YKYPVG   V TM#  V  LFC M     V     RGIV  F   PKL  SRTE      MV     
Conservation:  9667262402212111304202385523120304040012142324243615126443240413131101111110100001000013335954464253
STMI:                                                                                                     MMMMMMMMM
SS_PSIPRED:    HHHHHHEE         EE          HHH  HH    EEEEEEEE      EEEEEEEEEEE  HHHH               HHHHHHHHHHHHHH
SS_SPIDER3:     HHHHHHHHH      EEE      EEEHHH         EEEEEEEE  E   E EEEEEEEEE  HHHH              HHHHHHHHHHHHHHH
SS_PSSPRED:    HHHHHHHHHH        E     HHHHHHHH  HHHHHHEEEEEEEE      HHHHHHHHHHHHHHHHH               HHHHHHHHHHHHHH
DO_DISOPRED3:                                                                         DDD DDDDDD                   
DO_SPOTD:                                                                                 DDDDDDDDD                
DO_IUPRED2A:                                                                             DDD D                     

                       10        20        30        40        50        60        70        80        90     
AA:            VLFFLAVILAISLRLRLSSRSDAWDCFQPGLSSKPGPGVLPNYSEGTLPYSYNLCVASQSAKTEFNFLNITPELVPAQDLVCDNASWEQNTNHGAAGVPF 800
gnomAD_SAV:    A LLHEEL  TA C QPC # H L RL  R G #S LEG  S RK I  H    R VL#PP    S  S N###AL K  I    C  E IY AT#VIS 
Conservation:  2443233223220432010000000000000000010011201211111214122222021002213110000001000100000000000000000000
STMI:          MMMMMMMMMMMM                                                                                        
SS_PSIPRED:    HHHHHHHHHHHHHHHH     HHHH                          EEEEE        EEE         HH                      
SS_SPIDER3:    HHHHHHHHHHHHHHHHH     HH                         E EEEEE       EEEEE        H                       
SS_PSSPRED:    HHHHHHHHHHHHHHHH     HHHH                          EEEEE         EE                                 
DO_DISOPRED3:                           DD                                               DDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                                       DDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                       DDD                                                     DD   D  

                       10        20        30        40        50        60        70        80        90     
AA:            ASDTILKQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN 900
gnomAD_SAV:     A AVS K L  M  H   T  SSIRR R  N IS  S# P      H    V T  P   GF   AA D V   TC R  S RHYMLH H     LD S
Conservation:  0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
SS_PSIPRED:        HH            HHH                      HHHHHHHHHHHHHHHH                                  EEE    
SS_SPIDER3:      H H                                      HHHHHHHHHHHHHHH                                   EEE    
SS_PSSPRED:                                               HHHHHHHHHHHHHHHHH                                 EE     
DO_DISOPRED3:  DDDDD               DDDDDDDDDDDDD                                                                   
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD     DDDDDDDDD   DDDDDDDDDDDDDDDDDDDDDDD                       D
DO_IUPRED2A:    D D      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD     D    DD   D DDDDDDDDDDDDDD DDDDDDDDDDD D DDDDDDDDDDDD

                       10        20        30 
AA:            ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
gnomAD_SAV:         TV  Q D   E   S    L     *
Conservation:  0000000000000000000000000000000
SS_PSIPRED:                                   
SS_SPIDER3:     EE                            
SS_PSSPRED:                                   
DO_DISOPRED3:    DDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DD  DDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD